| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126452157
Identifier: 126452157
GI number: 126452157
Start: 3055055
End: 3055939
Strand: Reverse
Name: 126452157
Synonym: BURPS1106A_3133
Alternate gene names: NA
Gene position: 3055939-3055055 (Counterclockwise)
Preceding gene: 126453040
Following gene: 126453865
Centisome position: 76.62
GC content: 59.32
Gene sequence:
>885_bases TTGCGGATTCAGTCGGTCCTGTATAACAACAGTCAGCAGCACATCGATACGGCTCTCGAGAGCATCGGCCGTGCCGCCGA TCTGGCGATTGCGTCCGATGCGTTGTCATCGGTGGAAATCGCGTTGGGGGATTGCTCGCCGGAGCCGGTCTTTACGTCCG AAGAGATCGAGACGCGCGCCGCCAAACTGCGTCCGCAAGGCGTGACGCGGATTCAGTATACGTTCTTCGACGCGAATCTC GGGTCAGCCGCCGGACAGAATCGCCTGCTTGCCGATTTGCAGACCGATCTCGTGTTGATTCTGAACCCGGACACGGTGGT GGCGCCCAATATCTTCGGCGAACTGGTGCGGCCGATGCGCAAGCCAGGGGTGGGCATCGTCGAGGCAAGGCAGGTACCTA TCGAGCACCCGAAGGATTACGATCCAGTCACGGGCGAGACGAGTTGGGCGGCGACTGCGTGTGCCCTCGTCTCATCAGCG GTCGCAAAGGAAGTTGATGGCTTTGATTCGGAAGCATTCTTCCTGTACTGCGATGACGTGGACTTTTCGTGGCGAGTAAG GCTTGCCGGTTACAAGGTGGTGTTTCAGCCGTCGGCGGCGCTGTTTCACGACAAACGCCTTTCGACGGCGGGCAAATGGA TTGTCGGTGGAGCCGAGGAGTACTACTCGGCAGAGGCCGCGCTCATTCTCGCGCACAAATACTCGAATAGCGCATTGGCC GATCGTATCGAGCGCCAGCTCCTCGCCCAAGGCAGCGAAGTCGAAAAAAAGGCCGCCAGGAAGTATCGGGATCTCAAGGA CGCCGGGAAACTGCCCGCCCAGATCGATCCCGGGCATCGCGTGGCGCAATTCATCGATGGCTTCTACGCGAAACACCGCT TCTAA
Upstream 100 bases:
>100_bases TGCAGACCTGGATCGCGCAAGAGCTTGATCGCAAGAACTAGTCATACATCAGAGGTTACAAGTGCCACTGCACGATACGA CAATCACCGGTCCCGCGTCC
Downstream 100 bases:
>100_bases ACTATGAATTCTGCAACTTACCAGTTCCACTATCACGAGTATTCGGTGTACAGCAATGTCGTTGGGCTGATCACGGAGTT CGGCGCGCGCGATGGCGTGC
Product: putative glycosyl transferase
Products: NA
Alternate protein names: Glycosyltransferase; Glycosyltransferases-Like; Glycosyltransferase-Like Protein
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MRIQSVLYNNSQQHIDTALESIGRAADLAIASDALSSVEIALGDCSPEPVFTSEEIETRAAKLRPQGVTRIQYTFFDANL GSAAGQNRLLADLQTDLVLILNPDTVVAPNIFGELVRPMRKPGVGIVEARQVPIEHPKDYDPVTGETSWAATACALVSSA VAKEVDGFDSEAFFLYCDDVDFSWRVRLAGYKVVFQPSAALFHDKRLSTAGKWIVGGAEEYYSAEAALILAHKYSNSALA DRIERQLLAQGSEVEKKAARKYRDLKDAGKLPAQIDPGHRVAQFIDGFYAKHRF
Sequences:
>Translated_294_residues MRIQSVLYNNSQQHIDTALESIGRAADLAIASDALSSVEIALGDCSPEPVFTSEEIETRAAKLRPQGVTRIQYTFFDANL GSAAGQNRLLADLQTDLVLILNPDTVVAPNIFGELVRPMRKPGVGIVEARQVPIEHPKDYDPVTGETSWAATACALVSSA VAKEVDGFDSEAFFLYCDDVDFSWRVRLAGYKVVFQPSAALFHDKRLSTAGKWIVGGAEEYYSAEAALILAHKYSNSALA DRIERQLLAQGSEVEKKAARKYRDLKDAGKLPAQIDPGHRVAQFIDGFYAKHRF >Mature_294_residues MRIQSVLYNNSQQHIDTALESIGRAADLAIASDALSSVEIALGDCSPEPVFTSEEIETRAAKLRPQGVTRIQYTFFDANL GSAAGQNRLLADLQTDLVLILNPDTVVAPNIFGELVRPMRKPGVGIVEARQVPIEHPKDYDPVTGETSWAATACALVSSA VAKEVDGFDSEAFFLYCDDVDFSWRVRLAGYKVVFQPSAALFHDKRLSTAGKWIVGGAEEYYSAEAALILAHKYSNSALA DRIERQLLAQGSEVEKKAARKYRDLKDAGKLPAQIDPGHRVAQFIDGFYAKHRF
Specific function: Unknown
COG id: COG1216
COG function: function code R; Predicted glycosyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32248; Mature: 32248
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIQSVLYNNSQQHIDTALESIGRAADLAIASDALSSVEIALGDCSPEPVFTSEEIETRA CCCHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHH AKLRPQGVTRIQYTFFDANLGSAAGQNRLLADLQTDLVLILNPDTVVAPNIFGELVRPMR HHCCCCCCEEEEEEEEECCCCCCCCCCCCCEECCCCEEEEECCCCEECCHHHHHHHHHHH KPGVGIVEARQVPIEHPKDYDPVTGETSWAATACALVSSAVAKEVDGFDSEAFFLYCDDV CCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC DFSWRVRLAGYKVVFQPSAALFHDKRLSTAGKWIVGGAEEYYSAEAALILAHKYSNSALA CCEEEEEEEEEEEEECCCHHHHHHHHHCCCCCEEECCHHHHHCCCEEEEEEEECCCHHHH DRIERQLLAQGSEVEKKAARKYRDLKDAGKLPAQIDPGHRVAQFIDGFYAKHRF HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRIQSVLYNNSQQHIDTALESIGRAADLAIASDALSSVEIALGDCSPEPVFTSEEIETRA CCCHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHH AKLRPQGVTRIQYTFFDANLGSAAGQNRLLADLQTDLVLILNPDTVVAPNIFGELVRPMR HHCCCCCCEEEEEEEEECCCCCCCCCCCCCEECCCCEEEEECCCCEECCHHHHHHHHHHH KPGVGIVEARQVPIEHPKDYDPVTGETSWAATACALVSSAVAKEVDGFDSEAFFLYCDDV CCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC DFSWRVRLAGYKVVFQPSAALFHDKRLSTAGKWIVGGAEEYYSAEAALILAHKYSNSALA CCEEEEEEEEEEEEECCCHHHHHHHHHCCCCCEEECCHHHHHCCCEEEEEEEECCCHHHH DRIERQLLAQGSEVEKKAARKYRDLKDAGKLPAQIDPGHRVAQFIDGFYAKHRF HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA