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The map label for this gene is petC [H]

Identifier: 126452047

GI number: 126452047

Start: 3622593

End: 3623351

Strand: Reverse

Name: petC [H]

Synonym: BURPS1106A_3705

Alternate gene names: 126452047

Gene position: 3623351-3622593 (Counterclockwise)

Preceding gene: 126453900

Following gene: 126452854

Centisome position: 90.85

GC content: 59.95

Gene sequence:

>759_bases
ATGAAGAAATTGCTTTCGACGCTCGCAATGTTTATTGTGTCGGCATGTCTGCTGACGAGCGTATCCGTGCGGGCCGAAGA
GGGGGAATTTCCGCTCGACCGGGCACCCGACAACACGGAGAATCTCGTCTCCTTGCAGCATGGCGCGCAATTGTTTGTAA
ACTATTGCCTGAATTGCCATAGTGCGAACCTGATGCGCTACAACCGGCTGACGGATCTCGGTATCTCGCAGAAGGAGATC
GAGAAGAATCTGCTGTTTGCGACCGACAAGGTCGGCAACACGATGACCGTCGCGATGCGGCCGGAAGACGCGAAGACCTG
GCTCGGCGTTGCGCCGCCGGATCTGTCCGTCGAAGCGCGCGCTCGCAGCCGTGATTGGCTCTACACGTATCTGCGCACTT
TCTACCGCGACGATACGCGCCCGACGGGCTGGAACAACGCCGTGTTCCCGAACGTCGGCATGCCTCACGTGCTGTGGCAG
CTTCAGGGAGAGCGCATTGCAAAATTCGAGGAAAAGACGGACGAGGAAACGGGCGAGAAAACGCACAAGCTCGTCGGGTT
CCAGCAGGTGACGCCCGGGACGCTGGCGCCGGCGGATTACGACGCCGCGGTCGGCGATCTGGTCGCGTACCTGAACTGGA
TGTCCGAGCCGGCGCAACAGACCCGCAAGCGCCTCGGCGTATGGGTGCTGCTGTTCCTTGGTGTCCTGACGTTCCTCGCG
TGGCGGCTGAATGCCGCCTACTGGAAAGATATCAAGTAA

Upstream 100 bases:

>100_bases
TTCCTCGGCATGCCGTTCTGGACGCCGCTTGGCACCTTCAAGCAGCCGCCGGAACGCGTGCGGTTCAAATCCCATTGACG
TGAGCGAAGGGGGAATTCGT

Downstream 100 bases:

>100_bases
TCACGCCGAGACTGGCGTGGGGCCAGCGCAAGGAAGAGCCTGCAAGGGGCTTTTCCGCGCGCTGGCCCTCGGCTTTTTGA
GGAAACGCAAACATGATGGT

Product: ubiquinol-cytochrome c reductase, cytochrome c1

Products: Q; ferrocytochrome c

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MKKLLSTLAMFIVSACLLTSVSVRAEEGEFPLDRAPDNTENLVSLQHGAQLFVNYCLNCHSANLMRYNRLTDLGISQKEI
EKNLLFATDKVGNTMTVAMRPEDAKTWLGVAPPDLSVEARARSRDWLYTYLRTFYRDDTRPTGWNNAVFPNVGMPHVLWQ
LQGERIAKFEEKTDEETGEKTHKLVGFQQVTPGTLAPADYDAAVGDLVAYLNWMSEPAQQTRKRLGVWVLLFLGVLTFLA
WRLNAAYWKDIK

Sequences:

>Translated_252_residues
MKKLLSTLAMFIVSACLLTSVSVRAEEGEFPLDRAPDNTENLVSLQHGAQLFVNYCLNCHSANLMRYNRLTDLGISQKEI
EKNLLFATDKVGNTMTVAMRPEDAKTWLGVAPPDLSVEARARSRDWLYTYLRTFYRDDTRPTGWNNAVFPNVGMPHVLWQ
LQGERIAKFEEKTDEETGEKTHKLVGFQQVTPGTLAPADYDAAVGDLVAYLNWMSEPAQQTRKRLGVWVLLFLGVLTFLA
WRLNAAYWKDIK
>Mature_252_residues
MKKLLSTLAMFIVSACLLTSVSVRAEEGEFPLDRAPDNTENLVSLQHGAQLFVNYCLNCHSANLMRYNRLTDLGISQKEI
EKNLLFATDKVGNTMTVAMRPEDAKTWLGVAPPDLSVEARARSRDWLYTYLRTFYRDDTRPTGWNNAVFPNVGMPHVLWQ
LQGERIAKFEEKTDEETGEKTHKLVGFQQVTPGTLAPADYDAAVGDLVAYLNWMSEPAQQTRKRLGVWVLLFLGVLTFLA
WRLNAAYWKDIK

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. c1 functions as an electron donor to cytochrome c [H]

COG id: COG2857

COG function: function code C; Cytochrome c1

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002326
- InterPro:   IPR021157
- InterPro:   IPR009056 [H]

Pfam domain/function: PF02167 Cytochrom_C1 [H]

EC number: 1.10.2.2

Molecular weight: Translated: 28619; Mature: 28619

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLSTLAMFIVSACLLTSVSVRAEEGEFPLDRAPDNTENLVSLQHGAQLFVNYCLNCH
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
SANLMRYNRLTDLGISQKEIEKNLLFATDKVGNTMTVAMRPEDAKTWLGVAPPDLSVEAR
CCCHHHHHHHHHCCCCHHHHHHHHHEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCHHH
ARSRDWLYTYLRTFYRDDTRPTGWNNAVFPNVGMPHVLWQLQGERIAKFEEKTDEETGEK
HCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHH
THKLVGFQQVTPGTLAPADYDAAVGDLVAYLNWMSEPAQQTRKRLGVWVLLFLGVLTFLA
HHHHHCHHCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
WRLNAAYWKDIK
HHHCHHHHCCCC
>Mature Secondary Structure
MKKLLSTLAMFIVSACLLTSVSVRAEEGEFPLDRAPDNTENLVSLQHGAQLFVNYCLNCH
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
SANLMRYNRLTDLGISQKEIEKNLLFATDKVGNTMTVAMRPEDAKTWLGVAPPDLSVEAR
CCCHHHHHHHHHCCCCHHHHHHHHHEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCHHH
ARSRDWLYTYLRTFYRDDTRPTGWNNAVFPNVGMPHVLWQLQGERIAKFEEKTDEETGEK
HCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHH
THKLVGFQQVTPGTLAPADYDAAVGDLVAYLNWMSEPAQQTRKRLGVWVLLFLGVLTFLA
HHHHHCHHCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
WRLNAAYWKDIK
HHHCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: QH2; ferricytochrome c

Specific reaction: QH2 + 2 ferricytochrome c = Q + 2 ferrocytochrome c

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA