| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126452011
Identifier: 126452011
GI number: 126452011
Start: 1842452
End: 1842865
Strand: Direct
Name: 126452011
Synonym: BURPS1106A_1886
Alternate gene names: NA
Gene position: 1842452-1842865 (Clockwise)
Preceding gene: 126453026
Following gene: 126453450
Centisome position: 46.19
GC content: 77.05
Gene sequence:
>414_bases ATGGCGATTCGATCGGAACACACCACGCGCCGGCGCGCGTCGCGCGCGGTGGCCGCGTGCGCGGCGCTCGCGGCGCTCGC CGGCTGCATGTCCGGCCACCCGCCGTACGGAATGCCCGATGCGTCGACGATCGGCTACGACGCGCGCACGGGCCTCGCGC GCGCGCCGGACTGCGCGGCGCTCGAGCAGCGCTCGCAGATGATCGACGCGGGCCGCGCGCGGCCCGGCGTGAGCTTCGGC TGCGCGACCTACGGCAACCTCGCGGCGATGCTCGCGCGGCCCGCCGATCTCGTCGCGCCGCTGCCGTACGCGGGCGCGGA CGCGGCGCTCGGCGCGAGCGCGGTGCGCCGCTACGACGAAGGCCGCGCGACGCCGCTGAACCCGACGTCGACGACGACGT CCGTCACGCACTAG
Upstream 100 bases:
>100_bases GCTCGGCATCGATCCGCTCGGCGGCGATGCGCCGCGGCTCGCGGGCCCGGCGGGGTTCGTCTACTGACGACGGAAGACAA GAGGGACACGGAGGCATTCG
Downstream 100 bases:
>100_bases CGGAGGCGAAATGGGCGCATTCGACCGGGTGGGCGGCGCGCGGCCCGTGAAGGAACTGCGCGACGCGGCGGGCGGCGCGC GCCTCGTCGCGATCGTCGCC
Product: putative lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MAIRSEHTTRRRASRAVAACAALAALAGCMSGHPPYGMPDASTIGYDARTGLARAPDCAALEQRSQMIDAGRARPGVSFG CATYGNLAAMLARPADLVAPLPYAGADAALGASAVRRYDEGRATPLNPTSTTTSVTH
Sequences:
>Translated_137_residues MAIRSEHTTRRRASRAVAACAALAALAGCMSGHPPYGMPDASTIGYDARTGLARAPDCAALEQRSQMIDAGRARPGVSFG CATYGNLAAMLARPADLVAPLPYAGADAALGASAVRRYDEGRATPLNPTSTTTSVTH >Mature_136_residues AIRSEHTTRRRASRAVAACAALAALAGCMSGHPPYGMPDASTIGYDARTGLARAPDCAALEQRSQMIDAGRARPGVSFGC ATYGNLAAMLARPADLVAPLPYAGADAALGASAVRRYDEGRATPLNPTSTTTSVTH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14047; Mature: 13916
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIRSEHTTRRRASRAVAACAALAALAGCMSGHPPYGMPDASTIGYDARTGLARAPDCAA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH LEQRSQMIDAGRARPGVSFGCATYGNLAAMLARPADLVAPLPYAGADAALGASAVRRYDE HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHC GRATPLNPTSTTTSVTH CCCCCCCCCCCCCCCCC >Mature Secondary Structure AIRSEHTTRRRASRAVAACAALAALAGCMSGHPPYGMPDASTIGYDARTGLARAPDCAA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH LEQRSQMIDAGRARPGVSFGCATYGNLAAMLARPADLVAPLPYAGADAALGASAVRRYDE HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHC GRATPLNPTSTTTSVTH CCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA