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The map label for this gene is 126451629

Identifier: 126451629

GI number: 126451629

Start: 139035

End: 140048

Strand: Direct

Name: 126451629

Synonym: BURPS1106A_0145

Alternate gene names: NA

Gene position: 139035-140048 (Clockwise)

Preceding gene: 126453061

Following gene: 126454726

Centisome position: 3.49

GC content: 65.29

Gene sequence:

>1014_bases
TTGAGGAACAGGCCGCGCCAAATCCGAGCGCCGGCGCGCGCCGAGGTCTTCACGTTCGACGATCCGACGCCCGTCATGAA
CCGGGCCGAGATTCTCGATTACGTCGAGTGCTGGTCGAACGGCGAATGGTTCGAGCCGCCGGTCAGCTTCGCCGGCCTGG
CGAAATCGTTTCGCGCGAGCACGCACCATAGCTCGGCGCTGTTCTTCAAGGCGAACGTGCTGGCGTCGACATTCCGCCCG
CACCGCTGGCTGTCGCGGCACGCGTTCGAGCGGTGGGCGCTCGATTTCCTGACGTTCGGCAACGGCTATCTGGAACGCCG
CCGCAACATGGTCGGCGGCACGCTGCGGCTCGAGCCCGCGCTCGCGAAGTACGTCCGGCGCAAGGCCGATTTCAACGGCT
TCGTGTACGTGAACGGCTGGCAGGAGCGGCACGAGTTCGAGCCCGACAGCGTGTTCCAGCTCGTGCGGCCGGACATCAAT
CAGGAGGTCTACGGCCTGCCCGAGTATCTGAGCTCGCTGCACTCGGCCTGGCTGAACGAATCGTCGACGCTGTTCCGGCG
CAAGTATTACGAGAACGGCAGCCACGCCGGCTTCATCCTGTACATGACCGACGCCGCGCAGAAACAGGACGACGTGGACA
ACATGCGCGACGCGCTGAAGAACGCGAAGGGGCCGGGCAACTTCCGCAACGTGTTCATGTACGCGCCGGGCGGGAAGAAG
GACGGCATCCAGCTCATTCCCGTGTCCGAGGTCGCCGCGAAGGACGAGTTCTTCAACATCAAGAACGTGACGCGCGATGA
CCTGCTCGCCGCGCACCGCGTGCCGCCGCAGTTGCTTGGCATCGTGCCGAGCAATTCGGGCGGGTTCGGCACGCCGGATA
CCGCTGCACGCGTGTTCGGGCGCAACGAAATCAGGCCGCTACAGGCGCGGTTCGCCGAGCTGAACGACTGGCTCGGCGAC
GAGGTCGTGACGTTCGACGATTACGAGATTCCGCCGGTGCCGGTCGCGGCGTAG

Upstream 100 bases:

>100_bases
AAGGCAGCGGGTTTTCGGCGGATTGTCGTCGTGGCGCCGCCGCGCGTCGACGACGGCGCCTTCCGCGTGCTCGAACGTCA
CCAGTTCCGCGGCAACGACT

Downstream 100 bases:

>100_bases
CGCGCAGACCAGTGCAACGCCGCGCATCCGGCCGTCGATGGCGTTACGCGTGCGCAGCCGTGCGAACGCGCGAGCGTGCA
CGCGTTGTTGCCGGCGCGGG

Product: PBSX family phage portal protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MRNRPRQIRAPARAEVFTFDDPTPVMNRAEILDYVECWSNGEWFEPPVSFAGLAKSFRASTHHSSALFFKANVLASTFRP
HRWLSRHAFERWALDFLTFGNGYLERRRNMVGGTLRLEPALAKYVRRKADFNGFVYVNGWQERHEFEPDSVFQLVRPDIN
QEVYGLPEYLSSLHSAWLNESSTLFRRKYYENGSHAGFILYMTDAAQKQDDVDNMRDALKNAKGPGNFRNVFMYAPGGKK
DGIQLIPVSEVAAKDEFFNIKNVTRDDLLAAHRVPPQLLGIVPSNSGGFGTPDTAARVFGRNEIRPLQARFAELNDWLGD
EVVTFDDYEIPPVPVAA

Sequences:

>Translated_337_residues
MRNRPRQIRAPARAEVFTFDDPTPVMNRAEILDYVECWSNGEWFEPPVSFAGLAKSFRASTHHSSALFFKANVLASTFRP
HRWLSRHAFERWALDFLTFGNGYLERRRNMVGGTLRLEPALAKYVRRKADFNGFVYVNGWQERHEFEPDSVFQLVRPDIN
QEVYGLPEYLSSLHSAWLNESSTLFRRKYYENGSHAGFILYMTDAAQKQDDVDNMRDALKNAKGPGNFRNVFMYAPGGKK
DGIQLIPVSEVAAKDEFFNIKNVTRDDLLAAHRVPPQLLGIVPSNSGGFGTPDTAARVFGRNEIRPLQARFAELNDWLGD
EVVTFDDYEIPPVPVAA
>Mature_337_residues
MRNRPRQIRAPARAEVFTFDDPTPVMNRAEILDYVECWSNGEWFEPPVSFAGLAKSFRASTHHSSALFFKANVLASTFRP
HRWLSRHAFERWALDFLTFGNGYLERRRNMVGGTLRLEPALAKYVRRKADFNGFVYVNGWQERHEFEPDSVFQLVRPDIN
QEVYGLPEYLSSLHSAWLNESSTLFRRKYYENGSHAGFILYMTDAAQKQDDVDNMRDALKNAKGPGNFRNVFMYAPGGKK
DGIQLIPVSEVAAKDEFFNIKNVTRDDLLAAHRVPPQLLGIVPSNSGGFGTPDTAARVFGRNEIRPLQARFAELNDWLGD
EVVTFDDYEIPPVPVAA

Specific function: Unknown

COG id: COG5518

COG function: function code R; Bacteriophage capsid portal protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage portal family. PBSX subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006944
- InterPro:   IPR006430 [H]

Pfam domain/function: PF04860 Phage_portal [H]

EC number: NA

Molecular weight: Translated: 38428; Mature: 38428

Theoretical pI: Translated: 7.29; Mature: 7.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNRPRQIRAPARAEVFTFDDPTPVMNRAEILDYVECWSNGEWFEPPVSFAGLAKSFRAS
CCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC
THHSSALFFKANVLASTFRPHRWLSRHAFERWALDFLTFGNGYLERRRNMVGGTLRLEPA
CCCCCEEEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEECHH
LAKYVRRKADFNGFVYVNGWQERHEFEPDSVFQLVRPDINQEVYGLPEYLSSLHSAWLNE
HHHHHHHHCCCCCEEEECCHHHHHCCCHHHHHHHHCCCCCCHHCCCHHHHHHHHHHHCCC
SSTLFRRKYYENGSHAGFILYMTDAAQKQDDVDNMRDALKNAKGPGNFRNVFMYAPGGKK
CHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCC
DGIQLIPVSEVAAKDEFFNIKNVTRDDLLAAHRVPPQLLGIVPSNSGGFGTPDTAARVFG
CCEEEEEHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHEEEEECCCCCCCCCHHHHHHHC
RNEIRPLQARFAELNDWLGDEVVTFDDYEIPPVPVAA
CCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCC
>Mature Secondary Structure
MRNRPRQIRAPARAEVFTFDDPTPVMNRAEILDYVECWSNGEWFEPPVSFAGLAKSFRAS
CCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC
THHSSALFFKANVLASTFRPHRWLSRHAFERWALDFLTFGNGYLERRRNMVGGTLRLEPA
CCCCCEEEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEECHH
LAKYVRRKADFNGFVYVNGWQERHEFEPDSVFQLVRPDINQEVYGLPEYLSSLHSAWLNE
HHHHHHHHCCCCCEEEECCHHHHHCCCHHHHHHHHCCCCCCHHCCCHHHHHHHHHHHCCC
SSTLFRRKYYENGSHAGFILYMTDAAQKQDDVDNMRDALKNAKGPGNFRNVFMYAPGGKK
CHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCC
DGIQLIPVSEVAAKDEFFNIKNVTRDDLLAAHRVPPQLLGIVPSNSGGFGTPDTAARVFG
CCEEEEEHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHEEEEECCCCCCCCCHHHHHHHC
RNEIRPLQARFAELNDWLGDEVVTFDDYEIPPVPVAA
CCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1701261 [H]