Definition Burkholderia pseudomallei 1106a chromosome I, complete genome.
Accession NC_009076
Length 3,988,455

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The map label for this gene is 126451546

Identifier: 126451546

GI number: 126451546

Start: 421180

End: 421824

Strand: Direct

Name: 126451546

Synonym: BURPS1106A_0456

Alternate gene names: NA

Gene position: 421180-421824 (Clockwise)

Preceding gene: 126454789

Following gene: 126453148

Centisome position: 10.56

GC content: 68.99

Gene sequence:

>645_bases
ATGAACGCCCATACCCAGAAATCCCTGATCGCCGGCCCCGTCGGCCACATCGAGATCGCGATCGACCTGCCCGACGCCGT
GCGCGAGGGCTCGGCCGCGCCGCGCGGGATCGCGCTCGTCGCGCATCCGCATCCGCTGTTCGGCGGCACGATGGACAACA
AGGTCGCGCAGACGCTCGCGCGCATCTTCGTCCAGCTGAATTACGCGGTGATCCGCTCGAATTTTCGCGGCGTCGGCGCG
ACCGAGGGCGAGCACGACAACGGCGCCGGCGAAGTCGACGATCTGCTCGCGGTGCTCGCGCACATGCGCGCGCTGCCCGG
CCATGCGGACTTGCCGCTCGTGCTCGCCGGCTTCTCGTTCGGCACGTTCGTGCTGTCGCACGTCGGCAAGCGGCTGCGCG
ACGCGGGGCAGGCGATCGAGCGGATGGTGTTCGTCGGCACCGCGGCGAGCCGCTGGCAGGTCGCCGCGGTGCCGGAGGAC
ACGATCGTGATTCATGGCGAGAACGACGACACGGTGCCGATCGCGTCGGTCTACGACTGGGCGCGGCCGCAGGAACTGCC
CGTCATCGTGATTCCGGGCGCCGAGCATTTCCTCCATCGCAAGCTGCACATCCTGAAGCGCATTGTCGTCGGCGCGTGGC
GCTGA

Upstream 100 bases:

>100_bases
TCGTCGAATCGCATCTGCGCGACGGCCAGGTCGTCGAGCGCCTGAGAATCTGAGCCGTTTTTTTTCGAGTCACCCCGCAC
GCTGTCCGCATGAACGCCGC

Downstream 100 bases:

>100_bases
CGCGGGCGGCGGGCGCGTCGCCGATGGCGCCCGACGCGCGCGAGGGCGGGGGCGAGGGCGGTGGAAGCGGGAAGCGGGAA
GCGGCGATCGCGGCGCGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MNAHTQKSLIAGPVGHIEIAIDLPDAVREGSAAPRGIALVAHPHPLFGGTMDNKVAQTLARIFVQLNYAVIRSNFRGVGA
TEGEHDNGAGEVDDLLAVLAHMRALPGHADLPLVLAGFSFGTFVLSHVGKRLRDAGQAIERMVFVGTAASRWQVAAVPED
TIVIHGENDDTVPIASVYDWARPQELPVIVIPGAEHFLHRKLHILKRIVVGAWR

Sequences:

>Translated_214_residues
MNAHTQKSLIAGPVGHIEIAIDLPDAVREGSAAPRGIALVAHPHPLFGGTMDNKVAQTLARIFVQLNYAVIRSNFRGVGA
TEGEHDNGAGEVDDLLAVLAHMRALPGHADLPLVLAGFSFGTFVLSHVGKRLRDAGQAIERMVFVGTAASRWQVAAVPED
TIVIHGENDDTVPIASVYDWARPQELPVIVIPGAEHFLHRKLHILKRIVVGAWR
>Mature_214_residues
MNAHTQKSLIAGPVGHIEIAIDLPDAVREGSAAPRGIALVAHPHPLFGGTMDNKVAQTLARIFVQLNYAVIRSNFRGVGA
TEGEHDNGAGEVDDLLAVLAHMRALPGHADLPLVLAGFSFGTFVLSHVGKRLRDAGQAIERMVFVGTAASRWQVAAVPED
TIVIHGENDDTVPIASVYDWARPQELPVIVIPGAEHFLHRKLHILKRIVVGAWR

Specific function: Unknown

COG id: COG2945

COG function: function code R; Predicted hydrolase of the alpha/beta superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000383 [H]

Pfam domain/function: PF02129 Peptidase_S15 [H]

EC number: NA

Molecular weight: Translated: 23047; Mature: 23047

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAHTQKSLIAGPVGHIEIAIDLPDAVREGSAAPRGIALVAHPHPLFGGTMDNKVAQTLA
CCCCCCHHHHCCCCCEEEEEEECCHHHHCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHH
RIFVQLNYAVIRSNFRGVGATEGEHDNGAGEVDDLLAVLAHMRALPGHADLPLVLAGFSF
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCH
GTFVLSHVGKRLRDAGQAIERMVFVGTAASRWQVAAVPEDTIVIHGENDDTVPIASVYDW
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEECCCCCCEEHHHHHCC
ARPQELPVIVIPGAEHFLHRKLHILKRIVVGAWR
CCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNAHTQKSLIAGPVGHIEIAIDLPDAVREGSAAPRGIALVAHPHPLFGGTMDNKVAQTLA
CCCCCCHHHHCCCCCEEEEEEECCHHHHCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHH
RIFVQLNYAVIRSNFRGVGATEGEHDNGAGEVDDLLAVLAHMRALPGHADLPLVLAGFSF
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCH
GTFVLSHVGKRLRDAGQAIERMVFVGTAASRWQVAAVPEDTIVIHGENDDTVPIASVYDW
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEECCCCCCEEHHHHHCC
ARPQELPVIVIPGAEHFLHRKLHILKRIVVGAWR
CCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]