Definition Burkholderia pseudomallei 1106a chromosome I, complete genome.
Accession NC_009076
Length 3,988,455

Click here to switch to the map view.

The map label for this gene is 126451545

Identifier: 126451545

GI number: 126451545

Start: 2526908

End: 2527756

Strand: Reverse

Name: 126451545

Synonym: BURPS1106A_2572

Alternate gene names: NA

Gene position: 2527756-2526908 (Counterclockwise)

Preceding gene: 126451902

Following gene: 126453378

Centisome position: 63.38

GC content: 67.61

Gene sequence:

>849_bases
ATGTCAAATCAGTTGATTCAATCCGGCGTCGATTTTTCCGGTTCGGTGTTCCTGGCGTCGAGCAACGTCCGTGCGAACGC
ACATCGCCTGAACTGGCGCGCGAAAGTGCTCGTCAGCGGATATGCGGCGGATTTCAAGGGCAAGCGCGTGCTCGATCTCG
CGAGCCACGATGGCCGCTTCATGCACGCGGCGCTCGCGCACGGCGCGACGAAGGTGGTCGGCGTCGAGGCGCGCGACGAC
CATGTCGACAGCGCGCGGGCGAATCTCGCGCGAGGCGGTCATGATCGCGGCCGCTACGACGTCATCTGCGCGGATCTGGT
GGAATACCTGAAGTCGGTCGACACGGGCGCGTTCGACACGATCCTCTGCTTCGGCGTGCTGAGCCATCTGATCGAGCACG
TCGACATCGTGCGCGAAGTCGGCCGCATCGCGCCGGGCGCATTCATCCTCGATACGTGGGTCGCGCGCGAGCGGTGGAAC
TTGCGCGAACGGCTGCGCAACCGGCGCGTCAACGCATTCGTGCGGCGCACCCAGCAAGGCGGGTTCGGCAGCGTGTCGGG
CATCGCGCGCCTGCGCAGCTGGCTCAACGATGTGATCCCGAGCGGGCACAGCCGCACCGGCAATCTCGTGTTTCTTTACG
AGGACGCGGCGGCGCCCGGCGCGACCGTGCGCCAGAGCGGGCTGATGGGCTGGGCGAACCGCTCGCTCGTCGAGATGCTG
TTCGATCACTACGGGCTTGCGCACGAGCGCGTCGACTGGCGCGCGCAGGGCGTCGCCGACTGGAGCGAGCTCGAGGACTA
TCGGCTCGGCAGGCGCGAGAGCTGGGTCGCGCGCGCGCGGCGCGCGTGA

Upstream 100 bases:

>100_bases
ACGCACGCCGGCCACGGCCGCCGTCGCGTGAGGCGCGGGCGGCAGACACGCTCGCCGCGGATCGCCCGCGGCGGACCATT
CAATTTAGCGCGAGTCCGAT

Downstream 100 bases:

>100_bases
GAATCGAGAGGAGAGCGTCGTGAAGACATTCAGAGAGAAGGTTCGGGCCAGATGGCCGCATTACGACGACCGGCGCGGCG
TGTTCCTGCCCGGCGCGACG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MSNQLIQSGVDFSGSVFLASSNVRANAHRLNWRAKVLVSGYAADFKGKRVLDLASHDGRFMHAALAHGATKVVGVEARDD
HVDSARANLARGGHDRGRYDVICADLVEYLKSVDTGAFDTILCFGVLSHLIEHVDIVREVGRIAPGAFILDTWVARERWN
LRERLRNRRVNAFVRRTQQGGFGSVSGIARLRSWLNDVIPSGHSRTGNLVFLYEDAAAPGATVRQSGLMGWANRSLVEML
FDHYGLAHERVDWRAQGVADWSELEDYRLGRRESWVARARRA

Sequences:

>Translated_282_residues
MSNQLIQSGVDFSGSVFLASSNVRANAHRLNWRAKVLVSGYAADFKGKRVLDLASHDGRFMHAALAHGATKVVGVEARDD
HVDSARANLARGGHDRGRYDVICADLVEYLKSVDTGAFDTILCFGVLSHLIEHVDIVREVGRIAPGAFILDTWVARERWN
LRERLRNRRVNAFVRRTQQGGFGSVSGIARLRSWLNDVIPSGHSRTGNLVFLYEDAAAPGATVRQSGLMGWANRSLVEML
FDHYGLAHERVDWRAQGVADWSELEDYRLGRRESWVARARRA
>Mature_281_residues
SNQLIQSGVDFSGSVFLASSNVRANAHRLNWRAKVLVSGYAADFKGKRVLDLASHDGRFMHAALAHGATKVVGVEARDDH
VDSARANLARGGHDRGRYDVICADLVEYLKSVDTGAFDTILCFGVLSHLIEHVDIVREVGRIAPGAFILDTWVARERWNL
RERLRNRRVNAFVRRTQQGGFGSVSGIARLRSWLNDVIPSGHSRTGNLVFLYEDAAAPGATVRQSGLMGWANRSLVEMLF
DHYGLAHERVDWRAQGVADWSELEDYRLGRRESWVARARRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31478; Mature: 31347

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNQLIQSGVDFSGSVFLASSNVRANAHRLNWRAKVLVSGYAADFKGKRVLDLASHDGRF
CCCHHHHCCCCCCCEEEEEECCCCCCHHHHCCEEEEEEECCCCCCCCCEEEEECCCCCHH
MHAALAHGATKVVGVEARDDHVDSARANLARGGHDRGRYDVICADLVEYLKSVDTGAFDT
HHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHH
ILCFGVLSHLIEHVDIVREVGRIAPGAFILDTWVARERWNLRERLRNRRVNAFVRRTQQG
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GFGSVSGIARLRSWLNDVIPSGHSRTGNLVFLYEDAAAPGATVRQSGLMGWANRSLVEML
CCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHCCCCHHHHHHHHHH
FDHYGLAHERVDWRAQGVADWSELEDYRLGRRESWVARARRA
HHHHCCHHHHCCHHHCCCCCHHHHHHHHCCCHHHHHHHHCCC
>Mature Secondary Structure 
SNQLIQSGVDFSGSVFLASSNVRANAHRLNWRAKVLVSGYAADFKGKRVLDLASHDGRF
CCHHHHCCCCCCCEEEEEECCCCCCHHHHCCEEEEEEECCCCCCCCCEEEEECCCCCHH
MHAALAHGATKVVGVEARDDHVDSARANLARGGHDRGRYDVICADLVEYLKSVDTGAFDT
HHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHH
ILCFGVLSHLIEHVDIVREVGRIAPGAFILDTWVARERWNLRERLRNRRVNAFVRRTQQG
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GFGSVSGIARLRSWLNDVIPSGHSRTGNLVFLYEDAAAPGATVRQSGLMGWANRSLVEML
CCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHCCCCHHHHHHHHHH
FDHYGLAHERVDWRAQGVADWSELEDYRLGRRESWVARARRA
HHHHCCHHHHCCHHHCCCCCHHHHHHHHCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA