| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126451500
Identifier: 126451500
GI number: 126451500
Start: 983268
End: 984164
Strand: Direct
Name: 126451500
Synonym: BURPS1106A_1004
Alternate gene names: NA
Gene position: 983268-984164 (Clockwise)
Preceding gene: 126454378
Following gene: 126453277
Centisome position: 24.65
GC content: 72.46
Gene sequence:
>897_bases ATGCCCGATTACCTGTTTGCGACGACGCCGCTGCTGGACGTCGCCTATCTCGAATGGAACCCGGAAGGCGCGCGCACCGC CGTGCTGCTGCACGGCTGGCCGGACAGCCCGGCGTGCTGGAGCGCGGTCGCGCCCGCGCTCGCCGACGCCGGCTATCGCG TGCTCGCGCCCGCGCTGCGCGGTTTTGCGCCGACCCGCTTTCGCTGCGCGGCGACGCCGCGCAGCGGGCAGCTCGCGGCG CTGGGGCGCGACCTGCTCGATTTCGTCGACGCGCTGCGGCTCGAGAGCCCGGTGCTCGTCGGGCACGACTGGGGTGCGCG GGCCGCCGCGAACGCGTGCGGATTGCGCGAGCGGGCGGCGTCGCATCTCGCGATGCTGTCGGTCGGCTATGGCACGAACG ATCCGAATCAGCCGCTGTCGCTGCTGCAGGCGCGCAATTACTGGTATCACTGGTTCATGGCGACGCCGCGCGGTGAGCGG GCGGTGCGCGACGATCGCCGCGCGTTCGCGCGAACGATGTGGGATACGTGGGCGCCGGCGGGCTGGTATGCGCCGCAGGA TTTCGACGAAGCGGCCAACGCGTTCGACGGGCCCGACTGGGCGGACGTCGTGCTGCATTCGTACCGGCACCGCTGGGGCT TCGCGAGCGGCGACGCCGCCTATGCGGACGACGAAGCGCGTCTGAATCCCGCGCCCGTCCTGGCCGTGCCGACGCTCGTG CTGCACGGCGGCGCGGACACCTGCAATCATCCGGACAGCTCCGCGTCGCGCGAGCGCTTCTTTGCCGGGCGCTACGAGCG CGTCGTGCTCGACGGCGTCGGCCATTTTCCGCAGCGCGAGGCGGCCGCGCGCGTCGCCGGCGCGATCGTCGCGTTCTGCT CGGACGCGGATGCGTGA
Upstream 100 bases:
>100_bases ATATTCGAATAATAAATGATGATTCTTTGAGAATCGTGATGAGAGATCGGACTACGATCGACGTGAAATGTGAATGATTC GACGCTCGACGGAGGCCCCG
Downstream 100 bases:
>100_bases GCGCGGGCGCGCGGCGAGGCTGCGGGGCCGGGGCGGGATGGCAAGACGGCGAGACGGCGGGGCCGGGGCGGGATGGCAAG ACGGCGAGACGGCGGGATGG
Product: alpha/beta fold family hydrolase
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold; Epoxide Hydrolase Protein; Alpha/Beta Hydrolase; Epoxide Hydrolase; Hydrolase; Alpha/Beta Family Hydrolase; Twin-Arginine Translocation Pathway Signal; Alpha/Beta Fold Family Hydrolase; Hydrolase Alpha/Beta Fold; Hydrolase Alpha/Beta Fold Family; Hydrolase Alpha/Beta Fold Family Protein; Epoxide Hydrolase EphC; Dehalogenase/Hydrolase; S33 Family Peptidase; Alpha/Beta Hydrolase Superfamily Protein; Epoxide Hydrolase EphB; Alpha/Beta Hydrolase Superfamily Hydrolase/Acyltransferase; Alpha/Beta Hydrolase Fold Containing Protein; Hydrolase Or Acyltransferase
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MPDYLFATTPLLDVAYLEWNPEGARTAVLLHGWPDSPACWSAVAPALADAGYRVLAPALRGFAPTRFRCAATPRSGQLAA LGRDLLDFVDALRLESPVLVGHDWGARAAANACGLRERAASHLAMLSVGYGTNDPNQPLSLLQARNYWYHWFMATPRGER AVRDDRRAFARTMWDTWAPAGWYAPQDFDEAANAFDGPDWADVVLHSYRHRWGFASGDAAYADDEARLNPAPVLAVPTLV LHGGADTCNHPDSSASRERFFAGRYERVVLDGVGHFPQREAAARVAGAIVAFCSDADA
Sequences:
>Translated_298_residues MPDYLFATTPLLDVAYLEWNPEGARTAVLLHGWPDSPACWSAVAPALADAGYRVLAPALRGFAPTRFRCAATPRSGQLAA LGRDLLDFVDALRLESPVLVGHDWGARAAANACGLRERAASHLAMLSVGYGTNDPNQPLSLLQARNYWYHWFMATPRGER AVRDDRRAFARTMWDTWAPAGWYAPQDFDEAANAFDGPDWADVVLHSYRHRWGFASGDAAYADDEARLNPAPVLAVPTLV LHGGADTCNHPDSSASRERFFAGRYERVVLDGVGHFPQREAAARVAGAIVAFCSDADA >Mature_297_residues PDYLFATTPLLDVAYLEWNPEGARTAVLLHGWPDSPACWSAVAPALADAGYRVLAPALRGFAPTRFRCAATPRSGQLAAL GRDLLDFVDALRLESPVLVGHDWGARAAANACGLRERAASHLAMLSVGYGTNDPNQPLSLLQARNYWYHWFMATPRGERA VRDDRRAFARTMWDTWAPAGWYAPQDFDEAANAFDGPDWADVVLHSYRHRWGFASGDAAYADDEARLNPAPVLAVPTLVL HGGADTCNHPDSSASRERFFAGRYERVVLDGVGHFPQREAAARVAGAIVAFCSDADA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32509; Mature: 32378
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDYLFATTPLLDVAYLEWNPEGARTAVLLHGWPDSPACWSAVAPALADAGYRVLAPALR CCCCEEECCCCEEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHH GFAPTRFRCAATPRSGQLAALGRDLLDFVDALRLESPVLVGHDWGARAAANACGLRERAA CCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHH SHLAMLSVGYGTNDPNQPLSLLQARNYWYHWFMATPRGERAVRDDRRAFARTMWDTWAPA HHHHHEEECCCCCCCCHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCC GWYAPQDFDEAANAFDGPDWADVVLHSYRHRWGFASGDAAYADDEARLNPAPVLAVPTLV CCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHEE LHGGADTCNHPDSSASRERFFAGRYERVVLDGVGHFPQREAAARVAGAIVAFCSDADA EECCCCCCCCCCCCHHHHHHHHCCHHEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PDYLFATTPLLDVAYLEWNPEGARTAVLLHGWPDSPACWSAVAPALADAGYRVLAPALR CCCEEECCCCEEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHH GFAPTRFRCAATPRSGQLAALGRDLLDFVDALRLESPVLVGHDWGARAAANACGLRERAA CCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHH SHLAMLSVGYGTNDPNQPLSLLQARNYWYHWFMATPRGERAVRDDRRAFARTMWDTWAPA HHHHHEEECCCCCCCCHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCC GWYAPQDFDEAANAFDGPDWADVVLHSYRHRWGFASGDAAYADDEARLNPAPVLAVPTLV CCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHEE LHGGADTCNHPDSSASRERFFAGRYERVVLDGVGHFPQREAAARVAGAIVAFCSDADA EECCCCCCCCCCCCHHHHHHHHCCHHEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA