Click here to switch to the map view.

The map label for this gene is yhhJ [H]

Identifier: 126447949

GI number: 126447949

Start: 135837

End: 136961

Strand: Reverse

Name: yhhJ [H]

Synonym: BMA10247_A0164

Alternate gene names: 126447949

Gene position: 136961-135837 (Counterclockwise)

Preceding gene: 126447286

Following gene: 126445955

Centisome position: 5.82

GC content: 67.2

Gene sequence:

>1125_bases
ATGCGGCGCCTCGCGATCATCTACCGTCTCGGCGTGAAGGAACTCTGGAGCCTCGTGCGCGACCCGATCCTGCTCGTGCT
GATCGCCTACACGTTCACCGCGTCGATCTACTCGGCCGCGACCGCGCGGCCCGACACGCTGCACATGGCGCCGATCGCGA
TCATCGACGAGGACGCCTCGCCGCTGTCCGCGCGCATCGCATCGGCGTTCTTTCCGCCGCAGTTCGCGCTGCCGAGGATG
GTGACGCTCGCCGAAGCGGACCGCGGCATGGACGCGGGCGACTTCACGTTCGCGCTCGACATCCCGCCGAACTTCCAGCG
CGACGTGCTCGCGGGGCGGCCCGCGCAGATCCAGCTGAACGTCGACGCGACGCGCATGAGCCAGGCGTTCACGGGCAACG
GCTACGTGCAGCAGATCGTGAGCGGCGAGATCGACGATTTCGCGCGCCGCTACCGGGCGAACACGGCGCCGCCCGTCGAC
ATCGCGATGCACATGCGCTTCAACCCGAATCTGGACCAGACGTGGTTCGGCTCGCTGATGGAAGTGATCAACAACGTGAC
GCTGCTGTCGATGGTGCTCACCGGCGCGGCGCTGATACGCGAGCGCGAGCACGGCACGATCGAGCACCTGCTCGTGATGC
CGGTGACGCCGGGCGAGATCATGCTGGCGAAGGTGTGGTCGATGGGGCTCGTCGTCGCGTGCGCGGCGGCGTTCTCGCTC
GCGTTCGTCGTGCGCGGCGCGCTGCACGTGCCGATCGAGGGATCGGTCGCGCTCTTCGTCATCGGCATGGCGATCCACCT
GTTCGCGACGACGTCGATGGGCATCTTTCTCGCGACGCTCGTGCGCAGCATGCCGCAGTTCGGGATGCTGCTCGTGCTGG
TGCTGCTGCCGCTGCAACTGCTGTCGGGCAGCCTGACGCCGCGCGAAAGCATGCCGTTCGCGGTGCAGAACATCATGCTC
GCCGCGCCGACGACGCACTTCGTCGAGATCGGGCAAGCGATCCTCTATCGCGGCGCGGGCATCGAGACGGTATGGCGGCA
GTTCCTGATCCTGGCGGTGATCGGCACCGCGCTGTTCCTGCTGTCGCTGAAGCGGTTTCGCAAGACGATCGGGCAGATGG
CGTGA

Upstream 100 bases:

>100_bases
CGCTCCACGAGCTCTACTCGCAGTTCTGGCCGCTCGCCGCCTGCGTACCGGTGATCCTCGGCGCGACCATACTGCTCTTG
AAAAAACAGGAACGCTGATC

Downstream 100 bases:

>100_bases
CGCAGGCCGAACGCGCCGCGCGCCGCTCTCGCACGGCGCGGGCGGCCCGCGCCTCGTCGCATCGCGCGCCGATCCTGTTC
TAGAATGAGCGGGCGATCGC

Product: ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MRRLAIIYRLGVKELWSLVRDPILLVLIAYTFTASIYSAATARPDTLHMAPIAIIDEDASPLSARIASAFFPPQFALPRM
VTLAEADRGMDAGDFTFALDIPPNFQRDVLAGRPAQIQLNVDATRMSQAFTGNGYVQQIVSGEIDDFARRYRANTAPPVD
IAMHMRFNPNLDQTWFGSLMEVINNVTLLSMVLTGAALIREREHGTIEHLLVMPVTPGEIMLAKVWSMGLVVACAAAFSL
AFVVRGALHVPIEGSVALFVIGMAIHLFATTSMGIFLATLVRSMPQFGMLLVLVLLPLQLLSGSLTPRESMPFAVQNIML
AAPTTHFVEIGQAILYRGAGIETVWRQFLILAVIGTALFLLSLKRFRKTIGQMA

Sequences:

>Translated_374_residues
MRRLAIIYRLGVKELWSLVRDPILLVLIAYTFTASIYSAATARPDTLHMAPIAIIDEDASPLSARIASAFFPPQFALPRM
VTLAEADRGMDAGDFTFALDIPPNFQRDVLAGRPAQIQLNVDATRMSQAFTGNGYVQQIVSGEIDDFARRYRANTAPPVD
IAMHMRFNPNLDQTWFGSLMEVINNVTLLSMVLTGAALIREREHGTIEHLLVMPVTPGEIMLAKVWSMGLVVACAAAFSL
AFVVRGALHVPIEGSVALFVIGMAIHLFATTSMGIFLATLVRSMPQFGMLLVLVLLPLQLLSGSLTPRESMPFAVQNIML
AAPTTHFVEIGQAILYRGAGIETVWRQFLILAVIGTALFLLSLKRFRKTIGQMA
>Mature_374_residues
MRRLAIIYRLGVKELWSLVRDPILLVLIAYTFTASIYSAATARPDTLHMAPIAIIDEDASPLSARIASAFFPPQFALPRM
VTLAEADRGMDAGDFTFALDIPPNFQRDVLAGRPAQIQLNVDATRMSQAFTGNGYVQQIVSGEIDDFARRYRANTAPPVD
IAMHMRFNPNLDQTWFGSLMEVINNVTLLSMVLTGAALIREREHGTIEHLLVMPVTPGEIMLAKVWSMGLVVACAAAFSL
AFVVRGALHVPIEGSVALFVIGMAIHLFATTSMGIFLATLVRSMPQFGMLLVLVLLPLQLLSGSLTPRESMPFAVQNIML
AAPTTHFVEIGQAILYRGAGIETVWRQFLILAVIGTALFLLSLKRFRKTIGQMA

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI226510979, Length=374, Percent_Identity=62.8342245989305, Blast_Score=471, Evalue=1e-134,
Organism=Escherichia coli, GI1787010, Length=379, Percent_Identity=27.4406332453826, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI48994943, Length=314, Percent_Identity=28.343949044586, Blast_Score=105, Evalue=7e-24,
Organism=Escherichia coli, GI1787011, Length=256, Percent_Identity=26.5625, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 40984; Mature: 40984

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLAIIYRLGVKELWSLVRDPILLVLIAYTFTASIYSAATARPDTLHMAPIAIIDEDAS
CCCEEHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECEEEEEECCCC
PLSARIASAFFPPQFALPRMVTLAEADRGMDAGDFTFALDIPPNFQRDVLAGRPAQIQLN
HHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHCCCCCEEEEE
VDATRMSQAFTGNGYVQQIVSGEIDDFARRYRANTAPPVDIAMHMRFNPNLDQTWFGSLM
CCHHHHHHHHCCCHHHHHHHCCCHHHHHHHHCCCCCCCCEEEEEEEECCCCCHHHHHHHH
EVINNVTLLSMVLTGAALIREREHGTIEHLLVMPVTPGEIMLAKVWSMGLVVACAAAFSL
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
AFVVRGALHVPIEGSVALFVIGMAIHLFATTSMGIFLATLVRSMPQFGMLLVLVLLPLQL
HHHHHCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
LSGSLTPRESMPFAVQNIMLAAPTTHFVEIGQAILYRGAGIETVWRQFLILAVIGTALFL
HCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
LSLKRFRKTIGQMA
HHHHHHHHHHCCCC
>Mature Secondary Structure
MRRLAIIYRLGVKELWSLVRDPILLVLIAYTFTASIYSAATARPDTLHMAPIAIIDEDAS
CCCEEHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECEEEEEECCCC
PLSARIASAFFPPQFALPRMVTLAEADRGMDAGDFTFALDIPPNFQRDVLAGRPAQIQLN
HHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHCCCCCEEEEE
VDATRMSQAFTGNGYVQQIVSGEIDDFARRYRANTAPPVDIAMHMRFNPNLDQTWFGSLM
CCHHHHHHHHCCCHHHHHHHCCCHHHHHHHHCCCCCCCCEEEEEEEECCCCCHHHHHHHH
EVINNVTLLSMVLTGAALIREREHGTIEHLLVMPVTPGEIMLAKVWSMGLVVACAAAFSL
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
AFVVRGALHVPIEGSVALFVIGMAIHLFATTSMGIFLATLVRSMPQFGMLLVLVLLPLQL
HHHHHCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
LSGSLTPRESMPFAVQNIMLAAPTTHFVEIGQAILYRGAGIETVWRQFLILAVIGTALFL
HCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
LSLKRFRKTIGQMA
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503; 8387990 [H]