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The map label for this gene is 126447813

Identifier: 126447813

GI number: 126447813

Start: 583648

End: 584370

Strand: Reverse

Name: 126447813

Synonym: BMA10247_A0628

Alternate gene names: NA

Gene position: 584370-583648 (Counterclockwise)

Preceding gene: 126445697

Following gene: 126447182

Centisome position: 24.84

GC content: 74.55

Gene sequence:

>723_bases
GTGGACATGGCTTTTTGGCTGAAAAACCGGCAGATTCCGCTCGTCGACGATCTGCGCATCGACGCGCCGCACGGCGTGCT
GCGCCGCGACGCGTTCGAGACGGTTCAGGCGCTCGGCGCCGCGCTCGACGCGCTCGCGGCGGAGCGCGACGCGGTGCTGC
GCGCGGCGCGCGACGATGCCGAGCGAATCGCCGCCGGCGCGCGCGCGCAAGCCGACGCGCTCGTCGAAGCCGCGCGGCGC
GAGCACGACAGCGCCTACGCGCGCGGCTACGACGCGGGCCGCGCGCAGGCGATCGCCGACTGGCACGCGCGGGCGGCCGA
TTCGTTCGAGCAGGAGCGGCGCGTGCGCGACCGGATGCGCGAGCGGCTCGCGGAGCTCGTCGCCGCGGCCGTCCAGCAGA
TGGTGCACACGGAGGATGCGCGCGGCCTCTTCGCGCGCGCGGCGCAGACGATCGAGCGCGTCGTCGCCGGCGCGAGCTAT
CTGACGGTGCGCGTGTGCGACGCCGATTACGACGCGGCGCGCGAGCAGTTCGGCCTGCTTGCCGACGCATGGCGCCGGCA
AGGGCGCAACGTGCCCGTCGATGTCGTCGTCGAGCCGCGCGTCGCGCGCGGCACCTGCGTGTGCGAATCCGATTTCGGCA
CCGTCGACGCGAGCCTCGATACCCAGCTGAACGCGATCCGCGCGGCGCTCGCCCGCGCGCTCGACGACGCGGGGCGCGCA
TGA

Upstream 100 bases:

>100_bases
CGCTGCCGCGCGAGCCCGCGCGCGCGCCGTGGCTCGAGCGCGCGGCGGCGGACGCGGACGGCGCGATGCTGCTCGCGCGC
GTGCCGTCGCTGTTTCCGGA

Downstream 100 bases:

>100_bases
ACGCGCTGGCCGATCTGTCCCGCGTCGCCGACGCGATGGCCGCCCGACTCGCGATCGAGCCCGCCGTCGGCATGACCGGC
AAGGTGCTCGAAGTGATCGG

Product: type III secretion system protein HrpB

Products: NA

Alternate protein names: Type III Secretion System Protein HrpB; Type III Secretion Apparatus Protein HrpE/YscL Family; TypeIII Secretion Cytoplasmic Protein SctL; Flagellar Biosynthesis/Type III Secretory Pathway Protein

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MDMAFWLKNRQIPLVDDLRIDAPHGVLRRDAFETVQALGAALDALAAERDAVLRAARDDAERIAAGARAQADALVEAARR
EHDSAYARGYDAGRAQAIADWHARAADSFEQERRVRDRMRERLAELVAAAVQQMVHTEDARGLFARAAQTIERVVAGASY
LTVRVCDADYDAAREQFGLLADAWRRQGRNVPVDVVVEPRVARGTCVCESDFGTVDASLDTQLNAIRAALARALDDAGRA

Sequences:

>Translated_240_residues
MDMAFWLKNRQIPLVDDLRIDAPHGVLRRDAFETVQALGAALDALAAERDAVLRAARDDAERIAAGARAQADALVEAARR
EHDSAYARGYDAGRAQAIADWHARAADSFEQERRVRDRMRERLAELVAAAVQQMVHTEDARGLFARAAQTIERVVAGASY
LTVRVCDADYDAAREQFGLLADAWRRQGRNVPVDVVVEPRVARGTCVCESDFGTVDASLDTQLNAIRAALARALDDAGRA
>Mature_240_residues
MDMAFWLKNRQIPLVDDLRIDAPHGVLRRDAFETVQALGAALDALAAERDAVLRAARDDAERIAAGARAQADALVEAARR
EHDSAYARGYDAGRAQAIADWHARAADSFEQERRVRDRMRERLAELVAAAVQQMVHTEDARGLFARAAQTIERVVAGASY
LTVRVCDADYDAAREQFGLLADAWRRQGRNVPVDVVVEPRVARGTCVCESDFGTVDASLDTQLNAIRAALARALDDAGRA

Specific function: Unknown

COG id: COG1317

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26295; Mature: 26295

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMAFWLKNRQIPLVDDLRIDAPHGVLRRDAFETVQALGAALDALAAERDAVLRAARDDA
CCCHHEECCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERIAAGARAQADALVEAARREHDSAYARGYDAGRAQAIADWHARAADSFEQERRVRDRMR
HHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERLAELVAAAVQQMVHTEDARGLFARAAQTIERVVAGASYLTVRVCDADYDAAREQFGLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHH
ADAWRRQGRNVPVDVVVEPRVARGTCVCESDFGTVDASLDTQLNAIRAALARALDDAGRA
HHHHHHCCCCCCEEEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDMAFWLKNRQIPLVDDLRIDAPHGVLRRDAFETVQALGAALDALAAERDAVLRAARDDA
CCCHHEECCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERIAAGARAQADALVEAARREHDSAYARGYDAGRAQAIADWHARAADSFEQERRVRDRMR
HHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERLAELVAAAVQQMVHTEDARGLFARAAQTIERVVAGASYLTVRVCDADYDAAREQFGLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHH
ADAWRRQGRNVPVDVVVEPRVARGTCVCESDFGTVDASLDTQLNAIRAALARALDDAGRA
HHHHHHCCCCCCEEEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA