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The map label for this gene is yjcF [C]

Identifier: 126447541

GI number: 126447541

Start: 1622558

End: 1625200

Strand: Direct

Name: yjcF [C]

Synonym: BMA10247_A1681

Alternate gene names: 126447541

Gene position: 1622558-1625200 (Clockwise)

Preceding gene: 126445998

Following gene: 126447036

Centisome position: 68.97

GC content: 75.52

Gene sequence:

>2643_bases
ATGAAAATCGTCAAACCCGAAACGCTCGCGCTGATGTGCCGCACGCTGCGCATCGAACGCGCCGACCGGCTGTCGATCGG
CGCGCTCGCCTGCTTCGCGCTGCGCGCGCACGCGCCCGACGGCCCCGGCGATCTCGCGCCGGAGGCCACGCTCTGGCAGA
TCGCCCAGCAATGGCTCGGCGCCCATGCGCCGCTCGACGAGGGCTGGCCGAAGCCGGCGGGCGAATTTCTCGTCTACGGC
GACGCATGCGCGCCGGCGGGCCGCGAGCACGCGGGCGGCGCGCCGTTCGCGGTGCGCGCACGCATCGGCGCGGCATGCAA
GGCGCGGCTCGTCGATGCGCGCGACCCCGCCGAGCGGGTACTCGCCGATTTTCGCGCGCTGCCGCCGTCGCATCCGCAGC
GCGTGCGCGATCTCGGGCCGTTCGACGCGCGCTGGCTGGCCGAGCGGTGGCCTCACCTGCCTTCGGGCACGCGCGCCGAG
CATTTCCATACCGCACCGCGCGATCAGCGGATCGCCGGGTTCTGGCGCGGCGACGAGGACATCGAGCTCGTCAACCTGCA
CGCGCAGCATCCGATCGTCGCCGGCGCGTTGCCGCGCGTGCGGGCGCGCTGCTTCGTCGAGCGCTCGGCCGGCGGCGCGA
CGCGCGTCGACGCGTGCCCGATGCGCGCGGAAACCGTCTGGCTGTTCCCCGGCGCGGCATGCGGCATCGTCCTGTACCGC
GGGCTCGCCACGATCGACGACGAAGACGGCGACGACGTCTTGCGCGTGATCGCCGGCTGGGAAGATGCCGCCGCGCCGCC
GTTGCCCGCCGACGCTTATCTCGGCCGGCCGGCCTCCGGGGGCGCCGGCTCGCGCCCGACGCCCGCGCCCGACGCCGCGC
CCGTGGCGTCTGTGGTGCCCGCCGCGCTCACCGCCGAAGAAGCGCACGCCGACGAACATGCGCCGGGCGGATCGGCATCG
GCCTCGCAGGCGCACTCGCCGGCAGCGCCCGAGTTCCCCGAAGCACCGCACGCGCCGGATCTGTCCGCGCTCGAACGGGA
AGCGGCGGCGCTTGCCGGGCAAACCGACGCGTTGCTCGCCGGGCTGGGCATCACCGAAGCGGACATCGCGCGCTTGCTGC
CCGCGCGCGAGGCCCCCGCCGAGCTGAATCTGGATCAGCTCGCCACGCTCGCGGCCGAACTCGACGCGCAAACCGCACAG
TGGCAGGCGCAGCAAGCGGTGGCGGCCGTCGAGCGCGGCGACGCGGCCTCGGCGACGCCCGCCGCGCCGGCCACGCCGGA
TGCCGAGGCCGCGCACGAAGCGTCGCTGGCCGACCTGCTTCGGCAGGCCGACGCGCAAATGCGCGCCCTCGTCGAGCAGC
ACGGCCTGTCGCGCGCACGAATGGAGGCGGCCGCGCGAACCCTGCCGGAGCTCGCGCCCCTCGCGGGCTCGCTCGATGCC
CTCGACGCACTCGATGCGCCGCTCGACGTCGATGCCTTGACGGCAGGGCTCGCCGCCGCCGGCGGCGACGCGGCGGCCGA
ACCGGATACGCCGGCCGAACCGAGCCCGCCGGCGCCCGCGAACGAATTCGCCGCCGCCGTGCCCGCCCCCGCATCGTCCA
CCGCCGCGCCGCCGGTGGACGATGCGCCGCCAGGGCCGCTCACGCGCGAGCAAGTAATCGAGCGCCACGCGCGCGGGCTC
GGCTTCGCCGGCCTCGACCTGAGCGGCCTGGACCTGTCGTCGGCCGCGCTCGAGCGCGCGGACTTTCGCCGCGCACGCCT
CGAACGCACCCGCTTCGCGGGCTGCCGGCTCGCCGGCGCATCGTTCGAGCGCGCGCTGCTGTCGCACGCCGATTTCTCGA
ACGCGGACCTGCGCGACGCGGTCTTCGCCGGCGCCTCCGCGCCCGGCGCATCGTGGCGCGGCGCCGTGCTCGAGCGCGCG
CGCCTCGAGCACGGCGACTTCAGCGGCGGCGACTTCGTGCAAGCGTCGCTCGCCGACAGCCATTGCGCGCACGCGCAGTT
CGACGCGAGCGCGATGACGGCGCTCGTCGCGGCGCGCATCGACGGCACGCACGCGAGCTTCGCCGGCTGCACGCTCGACG
CCGCCGATTTCACGTCGGCGCGCCTGCCGCGCGCGAATTTCCAGCATGCGACGCTCGCGGACGCGGCGCTCGCCTGCGCG
CACTGCGACGGCGCCGAATGGTACGGCGCGCAGGCGCCGCGTGTCCGGCTTCGCGCGGCGTCGCTGCGCGGCTCGCGCGC
GGACGCGTCGACATCGTTCCGGCAAGCCGATCTGAGCAGCGCCGCGCTCGACGACGCGAACTGGGACGGCGTCGACCTGC
GCGGCACGAACCTGCACGAGGCGACGCTCGACGGCGCGAGCCTCGCGCGCGCGAACGCGAGCGGCGCGCAACTGACGCGC
GCGCGCGCACGGCGCGCGGATCTGACCCAGGCCGACCTCACGCACGCGGATGCGCGCTGCTCGAACCTGCACGGCGCATC
GCTGCGCCGCGCACGGCTCGGCGGCACGCAACTGCAATCGAGCAACCTGTACGGCGCCGACTGCTACGGCACCGCGCTCG
CCCGGCCGCAGCTCGACGGCGCGAATATCGAGCGCACGCTCCTCGCCGTGCCGGGCCGCCCCGAACTCGCCGCCTCCCGC
TGA

Upstream 100 bases:

>100_bases
CTGAACGGCACCAACGTCAAGCTGAACGGCAGCGCGTCGCTGAAGTTCGACGGCCAACTGATCCAGCTCGGCTGAGCCGC
GCATTCGTTCGGATTCCATC

Downstream 100 bases:

>100_bases
TTCCCTCGACGCCTTCCATGTCCGACCTCGTTCACACGGCGCTCGCCGCCCTCGCCAACACCCGCACGCTAACCGGCATC
GATCTTTCGGATGCCGATCT

Product: pentapeptide repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 880; Mature: 880

Protein sequence:

>880_residues
MKIVKPETLALMCRTLRIERADRLSIGALACFALRAHAPDGPGDLAPEATLWQIAQQWLGAHAPLDEGWPKPAGEFLVYG
DACAPAGREHAGGAPFAVRARIGAACKARLVDARDPAERVLADFRALPPSHPQRVRDLGPFDARWLAERWPHLPSGTRAE
HFHTAPRDQRIAGFWRGDEDIELVNLHAQHPIVAGALPRVRARCFVERSAGGATRVDACPMRAETVWLFPGAACGIVLYR
GLATIDDEDGDDVLRVIAGWEDAAAPPLPADAYLGRPASGGAGSRPTPAPDAAPVASVVPAALTAEEAHADEHAPGGSAS
ASQAHSPAAPEFPEAPHAPDLSALEREAAALAGQTDALLAGLGITEADIARLLPAREAPAELNLDQLATLAAELDAQTAQ
WQAQQAVAAVERGDAASATPAAPATPDAEAAHEASLADLLRQADAQMRALVEQHGLSRARMEAAARTLPELAPLAGSLDA
LDALDAPLDVDALTAGLAAAGGDAAAEPDTPAEPSPPAPANEFAAAVPAPASSTAAPPVDDAPPGPLTREQVIERHARGL
GFAGLDLSGLDLSSAALERADFRRARLERTRFAGCRLAGASFERALLSHADFSNADLRDAVFAGASAPGASWRGAVLERA
RLEHGDFSGGDFVQASLADSHCAHAQFDASAMTALVAARIDGTHASFAGCTLDAADFTSARLPRANFQHATLADAALACA
HCDGAEWYGAQAPRVRLRAASLRGSRADASTSFRQADLSSAALDDANWDGVDLRGTNLHEATLDGASLARANASGAQLTR
ARARRADLTQADLTHADARCSNLHGASLRRARLGGTQLQSSNLYGADCYGTALARPQLDGANIERTLLAVPGRPELAASR

Sequences:

>Translated_880_residues
MKIVKPETLALMCRTLRIERADRLSIGALACFALRAHAPDGPGDLAPEATLWQIAQQWLGAHAPLDEGWPKPAGEFLVYG
DACAPAGREHAGGAPFAVRARIGAACKARLVDARDPAERVLADFRALPPSHPQRVRDLGPFDARWLAERWPHLPSGTRAE
HFHTAPRDQRIAGFWRGDEDIELVNLHAQHPIVAGALPRVRARCFVERSAGGATRVDACPMRAETVWLFPGAACGIVLYR
GLATIDDEDGDDVLRVIAGWEDAAAPPLPADAYLGRPASGGAGSRPTPAPDAAPVASVVPAALTAEEAHADEHAPGGSAS
ASQAHSPAAPEFPEAPHAPDLSALEREAAALAGQTDALLAGLGITEADIARLLPAREAPAELNLDQLATLAAELDAQTAQ
WQAQQAVAAVERGDAASATPAAPATPDAEAAHEASLADLLRQADAQMRALVEQHGLSRARMEAAARTLPELAPLAGSLDA
LDALDAPLDVDALTAGLAAAGGDAAAEPDTPAEPSPPAPANEFAAAVPAPASSTAAPPVDDAPPGPLTREQVIERHARGL
GFAGLDLSGLDLSSAALERADFRRARLERTRFAGCRLAGASFERALLSHADFSNADLRDAVFAGASAPGASWRGAVLERA
RLEHGDFSGGDFVQASLADSHCAHAQFDASAMTALVAARIDGTHASFAGCTLDAADFTSARLPRANFQHATLADAALACA
HCDGAEWYGAQAPRVRLRAASLRGSRADASTSFRQADLSSAALDDANWDGVDLRGTNLHEATLDGASLARANASGAQLTR
ARARRADLTQADLTHADARCSNLHGASLRRARLGGTQLQSSNLYGADCYGTALARPQLDGANIERTLLAVPGRPELAASR
>Mature_880_residues
MKIVKPETLALMCRTLRIERADRLSIGALACFALRAHAPDGPGDLAPEATLWQIAQQWLGAHAPLDEGWPKPAGEFLVYG
DACAPAGREHAGGAPFAVRARIGAACKARLVDARDPAERVLADFRALPPSHPQRVRDLGPFDARWLAERWPHLPSGTRAE
HFHTAPRDQRIAGFWRGDEDIELVNLHAQHPIVAGALPRVRARCFVERSAGGATRVDACPMRAETVWLFPGAACGIVLYR
GLATIDDEDGDDVLRVIAGWEDAAAPPLPADAYLGRPASGGAGSRPTPAPDAAPVASVVPAALTAEEAHADEHAPGGSAS
ASQAHSPAAPEFPEAPHAPDLSALEREAAALAGQTDALLAGLGITEADIARLLPAREAPAELNLDQLATLAAELDAQTAQ
WQAQQAVAAVERGDAASATPAAPATPDAEAAHEASLADLLRQADAQMRALVEQHGLSRARMEAAARTLPELAPLAGSLDA
LDALDAPLDVDALTAGLAAAGGDAAAEPDTPAEPSPPAPANEFAAAVPAPASSTAAPPVDDAPPGPLTREQVIERHARGL
GFAGLDLSGLDLSSAALERADFRRARLERTRFAGCRLAGASFERALLSHADFSNADLRDAVFAGASAPGASWRGAVLERA
RLEHGDFSGGDFVQASLADSHCAHAQFDASAMTALVAARIDGTHASFAGCTLDAADFTSARLPRANFQHATLADAALACA
HCDGAEWYGAQAPRVRLRAASLRGSRADASTSFRQADLSSAALDDANWDGVDLRGTNLHEATLDGASLARANASGAQLTR
ARARRADLTQADLTHADARCSNLHGASLRRARLGGTQLQSSNLYGADCYGTALARPQLDGANIERTLLAVPGRPELAASR

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 5 pentapeptide repeat domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 91456; Mature: 91456

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIVKPETLALMCRTLRIERADRLSIGALACFALRAHAPDGPGDLAPEATLWQIAQQWLG
CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHC
AHAPLDEGWPKPAGEFLVYGDACAPAGREHAGGAPFAVRARIGAACKARLVDARDPAERV
CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCHHHHH
LADFRALPPSHPQRVRDLGPFDARWLAERWPHLPSGTRAEHFHTAPRDQRIAGFWRGDED
HHHHHCCCCCCHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCC
IELVNLHAQHPIVAGALPRVRARCFVERSAGGATRVDACPMRAETVWLFPGAACGIVLYR
EEEEEEECCCCCHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHH
GLATIDDEDGDDVLRVIAGWEDAAAPPLPADAYLGRPASGGAGSRPTPAPDAAPVASVVP
CHHCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHH
AALTAEEAHADEHAPGGSASASQAHSPAAPEFPEAPHAPDLSALEREAAALAGQTDALLA
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHH
GLGITEADIARLLPAREAPAELNLDQLATLAAELDAQTAQWQAQQAVAAVERGDAASATP
CCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
AAPATPDAEAAHEASLADLLRQADAQMRALVEQHGLSRARMEAAARTLPELAPLAGSLDA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHH
LDALDAPLDVDALTAGLAAAGGDAAAEPDTPAEPSPPAPANEFAAAVPAPASSTAAPPVD
HHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCC
DAPPGPLTREQVIERHARGLGFAGLDLSGLDLSSAALERADFRRARLERTRFAGCRLAGA
CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCC
SFERALLSHADFSNADLRDAVFAGASAPGASWRGAVLERARLEHGDFSGGDFVQASLADS
HHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEHHCCC
HCAHAQFDASAMTALVAARIDGTHASFAGCTLDAADFTSARLPRANFQHATLADAALACA
HHHHCCCCHHHHHHHHHHHCCCCCCCCCCCEECHHHCHHHCCCCCCCCHHHHHHHHHHHH
HCDGAEWYGAQAPRVRLRAASLRGSRADASTSFRQADLSSAALDDANWDGVDLRGTNLHE
CCCCCCCCCCCCCCEEEEHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCCHH
ATLDGASLARANASGAQLTRARARRADLTQADLTHADARCSNLHGASLRRARLGGTQLQS
HHCCCHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEC
SNLYGADCYGTALARPQLDGANIERTLLAVPGRPELAASR
CCCCCCCHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCC
>Mature Secondary Structure
MKIVKPETLALMCRTLRIERADRLSIGALACFALRAHAPDGPGDLAPEATLWQIAQQWLG
CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHC
AHAPLDEGWPKPAGEFLVYGDACAPAGREHAGGAPFAVRARIGAACKARLVDARDPAERV
CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCHHHHH
LADFRALPPSHPQRVRDLGPFDARWLAERWPHLPSGTRAEHFHTAPRDQRIAGFWRGDED
HHHHHCCCCCCHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCC
IELVNLHAQHPIVAGALPRVRARCFVERSAGGATRVDACPMRAETVWLFPGAACGIVLYR
EEEEEEECCCCCHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHH
GLATIDDEDGDDVLRVIAGWEDAAAPPLPADAYLGRPASGGAGSRPTPAPDAAPVASVVP
CHHCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHH
AALTAEEAHADEHAPGGSASASQAHSPAAPEFPEAPHAPDLSALEREAAALAGQTDALLA
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHH
GLGITEADIARLLPAREAPAELNLDQLATLAAELDAQTAQWQAQQAVAAVERGDAASATP
CCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
AAPATPDAEAAHEASLADLLRQADAQMRALVEQHGLSRARMEAAARTLPELAPLAGSLDA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHH
LDALDAPLDVDALTAGLAAAGGDAAAEPDTPAEPSPPAPANEFAAAVPAPASSTAAPPVD
HHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCC
DAPPGPLTREQVIERHARGLGFAGLDLSGLDLSSAALERADFRRARLERTRFAGCRLAGA
CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCC
SFERALLSHADFSNADLRDAVFAGASAPGASWRGAVLERARLEHGDFSGGDFVQASLADS
HHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEHHCCC
HCAHAQFDASAMTALVAARIDGTHASFAGCTLDAADFTSARLPRANFQHATLADAALACA
HHHHCCCCHHHHHHHHHHHCCCCCCCCCCCEECHHHCHHHCCCCCCCCHHHHHHHHHHHH
HCDGAEWYGAQAPRVRLRAASLRGSRADASTSFRQADLSSAALDDANWDGVDLRGTNLHE
CCCCCCCCCCCCCCEEEEHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCCHH
ATLDGASLARANASGAQLTRARARRADLTQADLTHADARCSNLHGASLRRARLGGTQLQS
HHCCCHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEC
SNLYGADCYGTALARPQLDGANIERTLLAVPGRPELAASR
CCCCCCCHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA