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The map label for this gene is yjcF [C]

Identifier: 126447036

GI number: 126447036

Start: 1625218

End: 1626282

Strand: Direct

Name: yjcF [C]

Synonym: BMA10247_A1682

Alternate gene names: 126447036

Gene position: 1625218-1626282 (Clockwise)

Preceding gene: 126447541

Following gene: 262192869

Centisome position: 69.08

GC content: 72.77

Gene sequence:

>1065_bases
ATGTCCGACCTCGTTCACACGGCGCTCGCCGCCCTCGCCAACACCCGCACGCTAACCGGCATCGATCTTTCGGATGCCGA
TCTTTCCGGCCGCGACCTGTCCGGCTGCACGTTCGAACGCGTGAGCCTGCGCGGCGCGAACCTGTCGGCCGCGCAGCTCG
ACGCGACGCGCTGGCTGCACTGCGACCTGACGGGCGCGCGCCTCGACGGCGCGACGCTCGGCGAATCGAGCTGGCACGCG
GTCGCGCTGCGCGCGGCGAGCCTGCGCGCGACGACGGGCGACGCATTCGCGATGACGGAAACCGACCTCGCCGGCGCGAC
GCTGACCGACGCGCTGTGGGCGCGCGCGACGTTCGAGCGCGGGGATTTCTCCGCCGCGCAGTGCGGGCGCGCGAAGCTGC
TGCGCTGCGAGGCGGCCGACTGCCGCTTCGAGCGCACCGATTTCGCGAACGCCGAGCTCGAGCGCTTCGTCGCGATGCGC
GCCGAGCTGTCGAGCGCGCGCTTCGACGCCACGCGGCTCACCCACGCGTTCTTCGCCGAAGCGAATCTGCGCGGGCAACG
CTTCGAGCGCTGCGATCTGACGATGACCCATTTCAGCCGCGCGGCGCTCGCCGGCTGCGATTTCAGCGGTGCGTCGCTCA
TGCAGACGATGTTCTTCGACGCGGACCTCGAACGCGCGACGCTCGCCGGCGCGCGCGGCCGCCACGTGCGTTTCGCGGGC
GCGACGCTCGACGGCGCGAATCTCGCGCACGCCGCGTTCGACGAATCCGATTTCGCGCGCGCGCGGCTGCGGGCGGCGAA
CGCGCGCGGGCTGCGCGCGCGAATGTCGCTCTTCGCGCACGCCGATTGCGCGGAGGCGACGCTCGCGGGCGGCCACTTCG
TCTACTGCGACTTCTCGCACGCCACGCTGTCGCACGCCGACTGCACCGGCGCCGACTTCTCGCACGCGAACCTGCACGGC
CTGGCCGATCACGCCGCCCGCTGGGACGGCGCGCGCAAGACAGGCGCGCGCGCGACCGATCCCGCGCTCGCGCACGCCGA
ACGATGGACCGCGCCCCAACGATGA

Upstream 100 bases:

>100_bases
CCCGGCCGCAGCTCGACGGCGCGAATATCGAGCGCACGCTCCTCGCCGTGCCGGGCCGCCCCGAACTCGCCGCCTCCCGC
TGATTCCCTCGACGCCTTCC

Downstream 100 bases:

>100_bases
TTCACGGCTCCCGCACTTCGATGACGCCCCCGCCCTCCTCCGCCCCCCTTGACGCGGCCGCGCCGCTGCCGCCCGTCCAC
GCCCGCCACGCCCGCCGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 353

Protein sequence:

>354_residues
MSDLVHTALAALANTRTLTGIDLSDADLSGRDLSGCTFERVSLRGANLSAAQLDATRWLHCDLTGARLDGATLGESSWHA
VALRAASLRATTGDAFAMTETDLAGATLTDALWARATFERGDFSAAQCGRAKLLRCEAADCRFERTDFANAELERFVAMR
AELSSARFDATRLTHAFFAEANLRGQRFERCDLTMTHFSRAALAGCDFSGASLMQTMFFDADLERATLAGARGRHVRFAG
ATLDGANLAHAAFDESDFARARLRAANARGLRARMSLFAHADCAEATLAGGHFVYCDFSHATLSHADCTGADFSHANLHG
LADHAARWDGARKTGARATDPALAHAERWTAPQR

Sequences:

>Translated_354_residues
MSDLVHTALAALANTRTLTGIDLSDADLSGRDLSGCTFERVSLRGANLSAAQLDATRWLHCDLTGARLDGATLGESSWHA
VALRAASLRATTGDAFAMTETDLAGATLTDALWARATFERGDFSAAQCGRAKLLRCEAADCRFERTDFANAELERFVAMR
AELSSARFDATRLTHAFFAEANLRGQRFERCDLTMTHFSRAALAGCDFSGASLMQTMFFDADLERATLAGARGRHVRFAG
ATLDGANLAHAAFDESDFARARLRAANARGLRARMSLFAHADCAEATLAGGHFVYCDFSHATLSHADCTGADFSHANLHG
LADHAARWDGARKTGARATDPALAHAERWTAPQR
>Mature_353_residues
SDLVHTALAALANTRTLTGIDLSDADLSGRDLSGCTFERVSLRGANLSAAQLDATRWLHCDLTGARLDGATLGESSWHAV
ALRAASLRATTGDAFAMTETDLAGATLTDALWARATFERGDFSAAQCGRAKLLRCEAADCRFERTDFANAELERFVAMRA
ELSSARFDATRLTHAFFAEANLRGQRFERCDLTMTHFSRAALAGCDFSGASLMQTMFFDADLERATLAGARGRHVRFAGA
TLDGANLAHAAFDESDFARARLRAANARGLRARMSLFAHADCAEATLAGGHFVYCDFSHATLSHADCTGADFSHANLHGL
ADHAARWDGARKTGARATDPALAHAERWTAPQR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 7 pentapeptide repeat domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 38037; Mature: 37905

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDLVHTALAALANTRTLTGIDLSDADLSGRDLSGCTFERVSLRGANLSAAQLDATRWLH
CCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCHHEECCCEEEE
CDLTGARLDGATLGESSWHAVALRAASLRATTGDAFAMTETDLAGATLTDALWARATFER
EECCCCCCCCCCCCCCCCEEEEEEEHHEEECCCCEEEEECCCCCCCHHHHHHHHHHHCCC
GDFSAAQCGRAKLLRCEAADCRFERTDFANAELERFVAMRAELSSARFDATRLTHAFFAE
CCCCHHHCCCHHEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ANLRGQRFERCDLTMTHFSRAALAGCDFSGASLMQTMFFDADLERATLAGARGRHVRFAG
CCCCCCCHHHCCEEHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHCCCCCCEEEEEC
ATLDGANLAHAAFDESDFARARLRAANARGLRARMSLFAHADCAEATLAGGHFVYCDFSH
CEECCCCHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHCCCCEEEEEECCC
ATLSHADCTGADFSHANLHGLADHAARWDGARKTGARATDPALAHAERWTAPQR
CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCC
>Mature Secondary Structure 
SDLVHTALAALANTRTLTGIDLSDADLSGRDLSGCTFERVSLRGANLSAAQLDATRWLH
CHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCHHEECCCEEEE
CDLTGARLDGATLGESSWHAVALRAASLRATTGDAFAMTETDLAGATLTDALWARATFER
EECCCCCCCCCCCCCCCCEEEEEEEHHEEECCCCEEEEECCCCCCCHHHHHHHHHHHCCC
GDFSAAQCGRAKLLRCEAADCRFERTDFANAELERFVAMRAELSSARFDATRLTHAFFAE
CCCCHHHCCCHHEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ANLRGQRFERCDLTMTHFSRAALAGCDFSGASLMQTMFFDADLERATLAGARGRHVRFAG
CCCCCCCHHHCCEEHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHCCCCCCEEEEEC
ATLDGANLAHAAFDESDFARARLRAANARGLRARMSLFAHADCAEATLAGGHFVYCDFSH
CEECCCCHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHCCCCEEEEEECCC
ATLSHADCTGADFSHANLHGLADHAARWDGARKTGARATDPALAHAERWTAPQR
CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]