| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is 126446908
Identifier: 126446908
GI number: 126446908
Start: 279684
End: 280313
Strand: Reverse
Name: 126446908
Synonym: BMA10247_A0319
Alternate gene names: NA
Gene position: 280313-279684 (Counterclockwise)
Preceding gene: 126446521
Following gene: 126446257
Centisome position: 11.91
GC content: 74.76
Gene sequence:
>630_bases GTGAGCGCGCGCGATGGCGACCGCGCCGCGGATCACGACATGCACGACGACCTCGCGCTGCCGCCGTACTACCTGATCAC GCCGGAGCCCGCCTCGGGTTCCGACGCGGATCTCGCGGCGTTTCTCGACCGGCTGTCGGACGCGCTCGCGACCGGGCTCA CGCTCGTCCAGCTGCGCGTGAAAACGCTCGACGCGCCCGCCTACGCGGCGCTCGCCGCCGGCGCGCTCGCGCGTTGCCGC GCGCAACGCGCGCGCATGATCGTCAACGGGCCGATCGCCGTGGAAGCCGCGCTCGCGCTCGGCGCCGCCGGCGTGCACCT CGGCAGCGCGGCATTGCGCGCCGCGACCGCGCGCCCGCTTGGTTCGGAGGGCCTGCTGTCGGCCGCGTGTCATTCGCTCG ACGAGCTGCGGCACGCGCAGCGCATCGGCGCGGATCTCGCGACGCTGTCGCCGGTGCTGCCGACGCTCACGCATCCGGGC GCGCCGACGCTCGGCTGGACGCGCTTCGCCGAATGCGCGGCGCACACGCGCGTGCCCGTCTACGCGCTGGGCGGCATGAC GCGCACGCATCTGGAGACGGCCCGCGCGCATCACGCGCACGGCATCGCGAGCATTCGCGGACTCTGGTAG
Upstream 100 bases:
>100_bases GCGTATCGTTCGATCGCTTCGACATCGTCGTGAAAAAGATGATCGGGCCGCGAATCGTGCTCGTGCGCGTGTATCCGAAG TCGCCCAAGGAAGCGGACGA
Downstream 100 bases:
>100_bases GAAATGATGCGCGACCGGGCGCGGCGCGACCGTCGCCTTGTTGCGCCCCTCGTCACGCCGTGCGCGTCACACGGAACCCG CCCGACATTGCGTCACGCAC
Product: putative thiamine-phosphate pyrophosphorylase ThiE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MSARDGDRAADHDMHDDLALPPYYLITPEPASGSDADLAAFLDRLSDALATGLTLVQLRVKTLDAPAYAALAAGALARCR AQRARMIVNGPIAVEAALALGAAGVHLGSAALRAATARPLGSEGLLSAACHSLDELRHAQRIGADLATLSPVLPTLTHPG APTLGWTRFAECAAHTRVPVYALGGMTRTHLETARAHHAHGIASIRGLW
Sequences:
>Translated_209_residues MSARDGDRAADHDMHDDLALPPYYLITPEPASGSDADLAAFLDRLSDALATGLTLVQLRVKTLDAPAYAALAAGALARCR AQRARMIVNGPIAVEAALALGAAGVHLGSAALRAATARPLGSEGLLSAACHSLDELRHAQRIGADLATLSPVLPTLTHPG APTLGWTRFAECAAHTRVPVYALGGMTRTHLETARAHHAHGIASIRGLW >Mature_208_residues SARDGDRAADHDMHDDLALPPYYLITPEPASGSDADLAAFLDRLSDALATGLTLVQLRVKTLDAPAYAALAAGALARCRA QRARMIVNGPIAVEAALALGAAGVHLGSAALRAATARPLGSEGLLSAACHSLDELRHAQRIGADLATLSPVLPTLTHPGA PTLGWTRFAECAAHTRVPVYALGGMTRTHLETARAHHAHGIASIRGLW
Specific function: Unknown
COG id: COG0352
COG function: function code H; Thiamine monophosphate synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TMP-PPase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR022998 - InterPro: IPR003733 [H]
Pfam domain/function: PF02581 TMP-TENI [H]
EC number: NA
Molecular weight: Translated: 21720; Mature: 21589
Theoretical pI: Translated: 7.38; Mature: 7.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSARDGDRAADHDMHDDLALPPYYLITPEPASGSDADLAAFLDRLSDALATGLTLVQLRV CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KTLDAPAYAALAAGALARCRAQRARMIVNGPIAVEAALALGAAGVHLGSAALRAATARPL HHCCCHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GSEGLLSAACHSLDELRHAQRIGADLATLSPVLPTLTHPGAPTLGWTRFAECAAHTRVPV CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCE YALGGMTRTHLETARAHHAHGIASIRGLW EEECCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SARDGDRAADHDMHDDLALPPYYLITPEPASGSDADLAAFLDRLSDALATGLTLVQLRV CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KTLDAPAYAALAAGALARCRAQRARMIVNGPIAVEAALALGAAGVHLGSAALRAATARPL HHCCCHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GSEGLLSAACHSLDELRHAQRIGADLATLSPVLPTLTHPGAPTLGWTRFAECAAHTRVPV CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCE YALGGMTRTHLETARAHHAHGIASIRGLW EEECCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]