Definition Burkholderia mallei NCTC 10247 chromosome II, complete genome.
Accession NC_009079
Length 2,352,693

Click here to switch to the map view.

The map label for this gene is 126446908

Identifier: 126446908

GI number: 126446908

Start: 279684

End: 280313

Strand: Reverse

Name: 126446908

Synonym: BMA10247_A0319

Alternate gene names: NA

Gene position: 280313-279684 (Counterclockwise)

Preceding gene: 126446521

Following gene: 126446257

Centisome position: 11.91

GC content: 74.76

Gene sequence:

>630_bases
GTGAGCGCGCGCGATGGCGACCGCGCCGCGGATCACGACATGCACGACGACCTCGCGCTGCCGCCGTACTACCTGATCAC
GCCGGAGCCCGCCTCGGGTTCCGACGCGGATCTCGCGGCGTTTCTCGACCGGCTGTCGGACGCGCTCGCGACCGGGCTCA
CGCTCGTCCAGCTGCGCGTGAAAACGCTCGACGCGCCCGCCTACGCGGCGCTCGCCGCCGGCGCGCTCGCGCGTTGCCGC
GCGCAACGCGCGCGCATGATCGTCAACGGGCCGATCGCCGTGGAAGCCGCGCTCGCGCTCGGCGCCGCCGGCGTGCACCT
CGGCAGCGCGGCATTGCGCGCCGCGACCGCGCGCCCGCTTGGTTCGGAGGGCCTGCTGTCGGCCGCGTGTCATTCGCTCG
ACGAGCTGCGGCACGCGCAGCGCATCGGCGCGGATCTCGCGACGCTGTCGCCGGTGCTGCCGACGCTCACGCATCCGGGC
GCGCCGACGCTCGGCTGGACGCGCTTCGCCGAATGCGCGGCGCACACGCGCGTGCCCGTCTACGCGCTGGGCGGCATGAC
GCGCACGCATCTGGAGACGGCCCGCGCGCATCACGCGCACGGCATCGCGAGCATTCGCGGACTCTGGTAG

Upstream 100 bases:

>100_bases
GCGTATCGTTCGATCGCTTCGACATCGTCGTGAAAAAGATGATCGGGCCGCGAATCGTGCTCGTGCGCGTGTATCCGAAG
TCGCCCAAGGAAGCGGACGA

Downstream 100 bases:

>100_bases
GAAATGATGCGCGACCGGGCGCGGCGCGACCGTCGCCTTGTTGCGCCCCTCGTCACGCCGTGCGCGTCACACGGAACCCG
CCCGACATTGCGTCACGCAC

Product: putative thiamine-phosphate pyrophosphorylase ThiE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MSARDGDRAADHDMHDDLALPPYYLITPEPASGSDADLAAFLDRLSDALATGLTLVQLRVKTLDAPAYAALAAGALARCR
AQRARMIVNGPIAVEAALALGAAGVHLGSAALRAATARPLGSEGLLSAACHSLDELRHAQRIGADLATLSPVLPTLTHPG
APTLGWTRFAECAAHTRVPVYALGGMTRTHLETARAHHAHGIASIRGLW

Sequences:

>Translated_209_residues
MSARDGDRAADHDMHDDLALPPYYLITPEPASGSDADLAAFLDRLSDALATGLTLVQLRVKTLDAPAYAALAAGALARCR
AQRARMIVNGPIAVEAALALGAAGVHLGSAALRAATARPLGSEGLLSAACHSLDELRHAQRIGADLATLSPVLPTLTHPG
APTLGWTRFAECAAHTRVPVYALGGMTRTHLETARAHHAHGIASIRGLW
>Mature_208_residues
SARDGDRAADHDMHDDLALPPYYLITPEPASGSDADLAAFLDRLSDALATGLTLVQLRVKTLDAPAYAALAAGALARCRA
QRARMIVNGPIAVEAALALGAAGVHLGSAALRAATARPLGSEGLLSAACHSLDELRHAQRIGADLATLSPVLPTLTHPGA
PTLGWTRFAECAAHTRVPVYALGGMTRTHLETARAHHAHGIASIRGLW

Specific function: Unknown

COG id: COG0352

COG function: function code H; Thiamine monophosphate synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TMP-PPase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR022998
- InterPro:   IPR003733 [H]

Pfam domain/function: PF02581 TMP-TENI [H]

EC number: NA

Molecular weight: Translated: 21720; Mature: 21589

Theoretical pI: Translated: 7.38; Mature: 7.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSARDGDRAADHDMHDDLALPPYYLITPEPASGSDADLAAFLDRLSDALATGLTLVQLRV
CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KTLDAPAYAALAAGALARCRAQRARMIVNGPIAVEAALALGAAGVHLGSAALRAATARPL
HHCCCHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GSEGLLSAACHSLDELRHAQRIGADLATLSPVLPTLTHPGAPTLGWTRFAECAAHTRVPV
CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCE
YALGGMTRTHLETARAHHAHGIASIRGLW
EEECCCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SARDGDRAADHDMHDDLALPPYYLITPEPASGSDADLAAFLDRLSDALATGLTLVQLRV
CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KTLDAPAYAALAAGALARCRAQRARMIVNGPIAVEAALALGAAGVHLGSAALRAATARPL
HHCCCHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GSEGLLSAACHSLDELRHAQRIGADLATLSPVLPTLTHPGAPTLGWTRFAECAAHTRVPV
CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCE
YALGGMTRTHLETARAHHAHGIASIRGLW
EEECCCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]