Definition Burkholderia mallei NCTC 10247 chromosome II, complete genome.
Accession NC_009079
Length 2,352,693

Click here to switch to the map view.

The map label for this gene is 126446894

Identifier: 126446894

GI number: 126446894

Start: 335150

End: 336841

Strand: Direct

Name: 126446894

Synonym: BMA10247_A0380

Alternate gene names: NA

Gene position: 335150-336841 (Clockwise)

Preceding gene: 126445832

Following gene: 126446470

Centisome position: 14.25

GC content: 73.46

Gene sequence:

>1692_bases
TTGCGGACGACGAAATCTCCCGGCATCTCCGTGATTCGGCAGCGGCTCGCCGTTGCGCTGCCGCTTGCGTTGACGCTCAC
CCTCGCGAGCTGCGGCGGTGACGATCTGACGCCCGCCGCGCAGCGCTGGGCGATGCCCGGCACCGAACTGCCGCTCGGGC
CGCAGGGCCTCGCGCAGAGCGTGTCGACGCAGACGCTCGCCGCAGGCGTCGCCTATTACCAGATCAAGCGCGGCGCGGCG
AGCGCGGCCGATTTCTGGACCGTCAACCTCGGCTTCTACGCGACGCAGGCCGCGGCGCAGGCCGATGCGGCGAATCTCGC
GGCGGCCGGCTTCGCGACGCGCGTCGACGCGTCGGCGGGCACCGACCTGCAGGGCAAGGTGCTCGGCTACTGGCTGTCGG
CCGGCCGCTACGCGACGCAGGCCGAGGCGACGGCGGCCGCCGCGCGCATCGCGCAGGCCACGCAGAACCGCTACAAGCCG
GGCACGCGGCATACGTCGCTCGCCGGCGCGCCGACGACGGGGCCGTGGATCGTCAACGTGCTCGCGATCGACCCGTCGCG
CGCCGGCGCGGCGCTGTCGCTCGCGCTGCCGGGCGGCAACGATCTCGGTGCGGGCGGCGAGACGGTTTCGGCCGCGCGGG
CGCGTGTGAACGCGCTCGCCGGCGTCAACGGCGGCTTTTTCACGAACATCAATCCGTTCGGCGCGCCGCTGCCGCCGCGC
TCGCCCGTCGGCGCGACGGTAGTCGACGGGCGGCTCGTCGCGGCCGCGATCGGCAGGCGCCCCGGCCTGCTGCTCGCGCG
CGACGCGAACGGCCGCCAACGCGCGACGGTCGTGCGCAATCTCGCGACGGCGATCACGCTGACCGACGCGCAAGGCAGTG
CGATCGCGGTCCAGACGCTGAACCGGCCGATCCTCGGTACGGTCGTCAATTGCGGCGCGCAGGCGCGCACGCCGACGAGC
GAGCCGGCGCAGGACACGGTGTGCACGAACTACGATGACCTCGTGATGTACGACTCGCTATATCTGCGCGGCGGTGCGTC
GAACACGCTCGTCGACGCCGGCTACCAGGGCGCGCGATACGAACTCGTGGTCGACGCGAACGGCGCCGTCGTCGCCGGCC
ATGCGACGCTCGGCGCGCCGCCGCCGCCGAACGGCTACGTGCTGCAGGGGCTCGGCGCGAGCGCCGCGTGGCTGCAGGCG
CATGCGACGCCGGGCACGCGCCTCGCGGTATCGCGCCGGCTGTCGGCCGACGGCGCGGATCTCGCGCTCGCGTCGGGCAC
GTCGCTCGTCGAGGCGGGGCCGACGCTGTCCGTGCCGAATCTCGCGCAAAGCGCCGCGCAAGAGGGCTTCGCGCCGACGG
TGGGCGGCGTCGACGCGGGCGAAGGCGCCGCGGCGAACGGCAACTGGTACAACGGCTGGTATGTCGCGCGCAATGGGCGC
ACCGCGGCGGGCGTCGCGGCGGACGGCACGATCCTGCTCGTCGAGATCGACGGCCGGCAGCCCACGTTGAGCGTCGGCAC
GAGCATTCCGGAGACGGCGGCGGTGATGGCATGGCTCGGTGCGACGTCGGCCGTCAATCTCGACGGCGGCGGCTCGAGCA
ACATGGTGGTCGGCGGCAAGATGGTCGGACATCCGTCCGACGCTGTGGGCGAGCGGGGCGTCGGCGATACGCTGATGCTG
CTGCCGGGCTGA

Upstream 100 bases:

>100_bases
CGCATCGTCTCGCGTTTAATCGCGCCGTCACGGGCGGTTCGTATACTCGGTCCCCGCCGCGCGCCGCCTCGCCGCGGACG
CAATCGACTGAGGAAAAATC

Downstream 100 bases:

>100_bases
TCGCGCAACCGTTTGCGCAGCCCCCGCTGCGCGCACGGCATGCATGGCATGCGCGGCGCGCGCCGCGCGGTTAATGGCGC
AGGTCGGTCCTCAGCCGCGT

Product: putative lipoprotein

Products: NA

Alternate protein names: Exopolysaccharide Biosynthesis Protein; Sporulation Domain-Containing Protein; Copper Amine Oxidase Domain-Containing Protein

Number of amino acids: Translated: 563; Mature: 563

Protein sequence:

>563_residues
MRTTKSPGISVIRQRLAVALPLALTLTLASCGGDDLTPAAQRWAMPGTELPLGPQGLAQSVSTQTLAAGVAYYQIKRGAA
SAADFWTVNLGFYATQAAAQADAANLAAAGFATRVDASAGTDLQGKVLGYWLSAGRYATQAEATAAAARIAQATQNRYKP
GTRHTSLAGAPTTGPWIVNVLAIDPSRAGAALSLALPGGNDLGAGGETVSAARARVNALAGVNGGFFTNINPFGAPLPPR
SPVGATVVDGRLVAAAIGRRPGLLLARDANGRQRATVVRNLATAITLTDAQGSAIAVQTLNRPILGTVVNCGAQARTPTS
EPAQDTVCTNYDDLVMYDSLYLRGGASNTLVDAGYQGARYELVVDANGAVVAGHATLGAPPPPNGYVLQGLGASAAWLQA
HATPGTRLAVSRRLSADGADLALASGTSLVEAGPTLSVPNLAQSAAQEGFAPTVGGVDAGEGAAANGNWYNGWYVARNGR
TAAGVAADGTILLVEIDGRQPTLSVGTSIPETAAVMAWLGATSAVNLDGGGSSNMVVGGKMVGHPSDAVGERGVGDTLML
LPG

Sequences:

>Translated_563_residues
MRTTKSPGISVIRQRLAVALPLALTLTLASCGGDDLTPAAQRWAMPGTELPLGPQGLAQSVSTQTLAAGVAYYQIKRGAA
SAADFWTVNLGFYATQAAAQADAANLAAAGFATRVDASAGTDLQGKVLGYWLSAGRYATQAEATAAAARIAQATQNRYKP
GTRHTSLAGAPTTGPWIVNVLAIDPSRAGAALSLALPGGNDLGAGGETVSAARARVNALAGVNGGFFTNINPFGAPLPPR
SPVGATVVDGRLVAAAIGRRPGLLLARDANGRQRATVVRNLATAITLTDAQGSAIAVQTLNRPILGTVVNCGAQARTPTS
EPAQDTVCTNYDDLVMYDSLYLRGGASNTLVDAGYQGARYELVVDANGAVVAGHATLGAPPPPNGYVLQGLGASAAWLQA
HATPGTRLAVSRRLSADGADLALASGTSLVEAGPTLSVPNLAQSAAQEGFAPTVGGVDAGEGAAANGNWYNGWYVARNGR
TAAGVAADGTILLVEIDGRQPTLSVGTSIPETAAVMAWLGATSAVNLDGGGSSNMVVGGKMVGHPSDAVGERGVGDTLML
LPG
>Mature_563_residues
MRTTKSPGISVIRQRLAVALPLALTLTLASCGGDDLTPAAQRWAMPGTELPLGPQGLAQSVSTQTLAAGVAYYQIKRGAA
SAADFWTVNLGFYATQAAAQADAANLAAAGFATRVDASAGTDLQGKVLGYWLSAGRYATQAEATAAAARIAQATQNRYKP
GTRHTSLAGAPTTGPWIVNVLAIDPSRAGAALSLALPGGNDLGAGGETVSAARARVNALAGVNGGFFTNINPFGAPLPPR
SPVGATVVDGRLVAAAIGRRPGLLLARDANGRQRATVVRNLATAITLTDAQGSAIAVQTLNRPILGTVVNCGAQARTPTS
EPAQDTVCTNYDDLVMYDSLYLRGGASNTLVDAGYQGARYELVVDANGAVVAGHATLGAPPPPNGYVLQGLGASAAWLQA
HATPGTRLAVSRRLSADGADLALASGTSLVEAGPTLSVPNLAQSAAQEGFAPTVGGVDAGEGAAANGNWYNGWYVARNGR
TAAGVAADGTILLVEIDGRQPTLSVGTSIPETAAVMAWLGATSAVNLDGGGSSNMVVGGKMVGHPSDAVGERGVGDTLML
LPG

Specific function: Unknown

COG id: COG4632

COG function: function code G; Exopolysaccharide biosynthesis protein related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56545; Mature: 56545

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00579 RIBOSOMAL_L29 ; PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTTKSPGISVIRQRLAVALPLALTLTLASCGGDDLTPAAQRWAMPGTELPLGPQGLAQS
CCCCCCCCHHHHHHHHHHHHHHHHEEEHHHCCCCCCCHHHHHHCCCCCCCCCCHHHHHHH
VSTQTLAAGVAYYQIKRGAASAADFWTVNLGFYATQAAAQADAANLAAAGFATRVDASAG
HHHHHHHHHHEEEEEECCCCCCCCEEEEECCEEEHHHHHHCCHHHHHHHCCCEEECCCCC
TDLQGKVLGYWLSAGRYATQAEATAAAARIAQATQNRYKPGTRHTSLAGAPTTGPWIVNV
CCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEE
LAIDPSRAGAALSLALPGGNDLGAGGETVSAARARVNALAGVNGGFFTNINPFGAPLPPR
EEECCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCC
SPVGATVVDGRLVAAAIGRRPGLLLARDANGRQRATVVRNLATAITLTDAQGSAIAVQTL
CCCCCEEECCEEEEHHHCCCCCEEEEECCCCCHHHHHHHHHEEEEEEECCCCCEEEEEEC
NRPILGTVVNCGAQARTPTSEPAQDTVCTNYDDLVMYDSLYLRGGASNTLVDAGYQGARY
CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCEEECCCCCCEE
ELVVDANGAVVAGHATLGAPPPPNGYVLQGLGASAAWLQAHATPGTRLAVSRRLSADGAD
EEEEECCCCEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEEEECCCCCCCC
LALASGTSLVEAGPTLSVPNLAQSAAQEGFAPTVGGVDAGEGAAANGNWYNGWYVARNGR
EEEECCCCEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC
TAAGVAADGTILLVEIDGRQPTLSVGTSIPETAAVMAWLGATSAVNLDGGGSSNMVVGGK
EEECEECCCEEEEEEECCCCCEEEECCCCCHHHHHHHHHCCCCEEEECCCCCCCEEECCE
MVGHPSDAVGERGVGDTLMLLPG
EECCCCHHHCCCCCCCEEEEECC
>Mature Secondary Structure
MRTTKSPGISVIRQRLAVALPLALTLTLASCGGDDLTPAAQRWAMPGTELPLGPQGLAQS
CCCCCCCCHHHHHHHHHHHHHHHHEEEHHHCCCCCCCHHHHHHCCCCCCCCCCHHHHHHH
VSTQTLAAGVAYYQIKRGAASAADFWTVNLGFYATQAAAQADAANLAAAGFATRVDASAG
HHHHHHHHHHEEEEEECCCCCCCCEEEEECCEEEHHHHHHCCHHHHHHHCCCEEECCCCC
TDLQGKVLGYWLSAGRYATQAEATAAAARIAQATQNRYKPGTRHTSLAGAPTTGPWIVNV
CCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEE
LAIDPSRAGAALSLALPGGNDLGAGGETVSAARARVNALAGVNGGFFTNINPFGAPLPPR
EEECCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCC
SPVGATVVDGRLVAAAIGRRPGLLLARDANGRQRATVVRNLATAITLTDAQGSAIAVQTL
CCCCCEEECCEEEEHHHCCCCCEEEEECCCCCHHHHHHHHHEEEEEEECCCCCEEEEEEC
NRPILGTVVNCGAQARTPTSEPAQDTVCTNYDDLVMYDSLYLRGGASNTLVDAGYQGARY
CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCEEECCCCCCEE
ELVVDANGAVVAGHATLGAPPPPNGYVLQGLGASAAWLQAHATPGTRLAVSRRLSADGAD
EEEEECCCCEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEEEECCCCCCCC
LALASGTSLVEAGPTLSVPNLAQSAAQEGFAPTVGGVDAGEGAAANGNWYNGWYVARNGR
EEEECCCCEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC
TAAGVAADGTILLVEIDGRQPTLSVGTSIPETAAVMAWLGATSAVNLDGGGSSNMVVGGK
EEECEECCCEEEEEEECCCCCEEEECCCCCHHHHHHHHHCCCCEEEECCCCCCCEEECCE
MVGHPSDAVGERGVGDTLMLLPG
EECCCCHHHCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA