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The map label for this gene is nahR [H]

Identifier: 126445832

GI number: 126445832

Start: 333930

End: 334871

Strand: Direct

Name: nahR [H]

Synonym: BMA10247_A0378

Alternate gene names: 126445832

Gene position: 333930-334871 (Clockwise)

Preceding gene: 126445877

Following gene: 126446894

Centisome position: 14.19

GC content: 62.63

Gene sequence:

>942_bases
ATGAATCTACGCTCGATCGACCTGAACCTGCTCGTCATATTGGATGCGCTGCTCGCGGAGCGGCAGGTGACCCGCGCCGG
ACAAAGGATCGGCCTGACGCAGCCGGCCGTCAGCAACGCGCTCGGGCGGCTGCGCTACGTGTTCAAGGACGAAATCCTGA
TGCGCACGCCGCTCGGGATGGAACTGACGCCCCGGGCGAAGGCGCTCGCCTGCCCGATTCGCCAGATTTTGCAACAAATA
GAGGAATTATTTGTTCCGGAAAATCAGTTCGATTCATTTACGTCCGATCGCCGTTTTACGCTCAGAATGTCGGACCTGAC
CGAATTGCTGCTGCCGCCGCCGCTATTGCGCAATATTCGGGGTACGGCGCCGCATATCCGGATGAACGTGATGCACCTGA
ACGCGGACAAGACCGTCGAGGCGCTCGATTCCGGCCGGCTCGACATGGCGGTCTGTGCGGGGCTCGATCATCCGGACGCG
ATTTCGTCGCAAGTGCTGTTTCAGGATCGGCTCGTCTGCGTGCTGAGCCGGCGCCATCCGGATGCGAACAGGCCGCTCAC
GCTCGAGCGCTTCGCGGCGCTCGATTTCCTCAACGTATCGATCAATCCCGTCGACAGCAGCCTGATCGACACGATGCTCG
CGGACATGCGCTTCACGCGCCGCATCGCGTTCAACGTGCCGCACTGGCTTGTCGTGCCGAGCATGCTCGATGCGCTGCCG
CTTGCCGTCATCATGTCCGAGCGGCACGCGCTGAGCCTAGGCGACTCGCGCCTCGCGATCCGCGAGCTGCCGCTCGATCT
CGAGCCGGTCACCTGGACGCTGTACTGGCATCGGCGTTACGACAACAGCGTTGCGCACGAATGGCTGCGCAATTGCATCA
CCGACGTCGTCGACGCGATCCAGCAGCGCGGCGTGTTCGAAGAGGCAAGCGCGGTGGGGTGA

Upstream 100 bases:

>100_bases
TCTTTTCCGTCGATTTACTAAATTCAATTTGGATTTGTATTTGGCAAATACCGAACGCCGATTATTTGGCGGCCAATTTC
GGAAAGGAAACGGCGCAATC

Downstream 100 bases:

>100_bases
GCGCCGCGGCGCGTCACGTGTCGGGCGCGGCGCCGCCGCGCATCGCATGTCGCGCATCGCATGCGCCGATCGTGGCGCGC
GCATTGCACGGATTGCATGT

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MNLRSIDLNLLVILDALLAERQVTRAGQRIGLTQPAVSNALGRLRYVFKDEILMRTPLGMELTPRAKALACPIRQILQQI
EELFVPENQFDSFTSDRRFTLRMSDLTELLLPPPLLRNIRGTAPHIRMNVMHLNADKTVEALDSGRLDMAVCAGLDHPDA
ISSQVLFQDRLVCVLSRRHPDANRPLTLERFAALDFLNVSINPVDSSLIDTMLADMRFTRRIAFNVPHWLVVPSMLDALP
LAVIMSERHALSLGDSRLAIRELPLDLEPVTWTLYWHRRYDNSVAHEWLRNCITDVVDAIQQRGVFEEASAVG

Sequences:

>Translated_313_residues
MNLRSIDLNLLVILDALLAERQVTRAGQRIGLTQPAVSNALGRLRYVFKDEILMRTPLGMELTPRAKALACPIRQILQQI
EELFVPENQFDSFTSDRRFTLRMSDLTELLLPPPLLRNIRGTAPHIRMNVMHLNADKTVEALDSGRLDMAVCAGLDHPDA
ISSQVLFQDRLVCVLSRRHPDANRPLTLERFAALDFLNVSINPVDSSLIDTMLADMRFTRRIAFNVPHWLVVPSMLDALP
LAVIMSERHALSLGDSRLAIRELPLDLEPVTWTLYWHRRYDNSVAHEWLRNCITDVVDAIQQRGVFEEASAVG
>Mature_313_residues
MNLRSIDLNLLVILDALLAERQVTRAGQRIGLTQPAVSNALGRLRYVFKDEILMRTPLGMELTPRAKALACPIRQILQQI
EELFVPENQFDSFTSDRRFTLRMSDLTELLLPPPLLRNIRGTAPHIRMNVMHLNADKTVEALDSGRLDMAVCAGLDHPDA
ISSQVLFQDRLVCVLSRRHPDANRPLTLERFAALDFLNVSINPVDSSLIDTMLADMRFTRRIAFNVPHWLVVPSMLDALP
LAVIMSERHALSLGDSRLAIRELPLDLEPVTWTLYWHRRYDNSVAHEWLRNCITDVVDAIQQRGVFEEASAVG

Specific function: Regulates the expression of the naphthalene (nahA-F) and salicylate (nahG-M) metabolism genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081684, Length=309, Percent_Identity=27.831715210356, Blast_Score=109, Evalue=3e-25,
Organism=Escherichia coli, GI1790147, Length=303, Percent_Identity=24.4224422442244, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: 825 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 35485; Mature: 35485

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLRSIDLNLLVILDALLAERQVTRAGQRIGLTQPAVSNALGRLRYVFKDEILMRTPLGM
CCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEECCCCC
ELTPRAKALACPIRQILQQIEELFVPENQFDSFTSDRRFTLRMSDLTELLLPPPLLRNIR
CCCCCHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCEEEEEHHHHHHHHCCCHHHHHCC
GTAPHIRMNVMHLNADKTVEALDSGRLDMAVCAGLDHPDAISSQVLFQDRLVCVLSRRHP
CCCCEEEEEEEEECCCHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCC
DANRPLTLERFAALDFLNVSINPVDSSLIDTMLADMRFTRRIAFNVPHWLVVPSMLDALP
CCCCCEEHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LAVIMSERHALSLGDSRLAIRELPLDLEPVTWTLYWHRRYDNSVAHEWLRNCITDVVDAI
HHHHHHCCHHCCCCCCHHHHHHCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHH
QQRGVFEEASAVG
HHCCCHHHHHCCC
>Mature Secondary Structure
MNLRSIDLNLLVILDALLAERQVTRAGQRIGLTQPAVSNALGRLRYVFKDEILMRTPLGM
CCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEECCCCC
ELTPRAKALACPIRQILQQIEELFVPENQFDSFTSDRRFTLRMSDLTELLLPPPLLRNIR
CCCCCHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCEEEEEHHHHHHHHCCCHHHHHCC
GTAPHIRMNVMHLNADKTVEALDSGRLDMAVCAGLDHPDAISSQVLFQDRLVCVLSRRHP
CCCCEEEEEEEEECCCHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCC
DANRPLTLERFAALDFLNVSINPVDSSLIDTMLADMRFTRRIAFNVPHWLVVPSMLDALP
CCCCCEEHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LAVIMSERHALSLGDSRLAIRELPLDLEPVTWTLYWHRRYDNSVAHEWLRNCITDVVDAI
HHHHHHCCHHCCCCCCHHHHHHCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHH
QQRGVFEEASAVG
HHCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2703465; 2848005 [H]