Click here to switch to the map view.

The map label for this gene is amiD [H]

Identifier: 126446700

GI number: 126446700

Start: 261103

End: 262143

Strand: Direct

Name: amiD [H]

Synonym: BMA10247_A0299

Alternate gene names: 126446700

Gene position: 261103-262143 (Clockwise)

Preceding gene: 126446137

Following gene: 126445768

Centisome position: 11.1

GC content: 68.78

Gene sequence:

>1041_bases
ATGGCTGAAGAACAACAAGCGAAAATCATCAACGAGGGCAGGCGCGGGTTTCTCGCGCGTTCGTCGGCGTGGCCGGTGGG
GATGCTGATGCTGCCGCTGGCCGGCTGCGGCGACGGCGACGGCGACGGCGTCGTGCCGTCCGCGCACGCGCAGGATACGC
CCCCGCCGTCGGGCGCCGGTTACACGATCGATCGCTCGATCCAGTCGCCGAACCAGGATTCGCGGGTGCGCACGCTCGTG
CTGCATTACACCGCGCAGACGCTCGCGGATTCGATCGCCTCGCTGACGAGCCCGCAGCGGCAGGTCAGCGCGCACTATCT
GGTGCCCGACGCGGCCGACGACGGCCGGCGCTTCAAGGTATTCGAGCTCGTGCCGCAGGCGCGCCGCGCATGGCACGCGG
GCGTCAGCTACTGGCAAGGCGACCGGATGCTCAATGCGGGCTCGGTCGGCATCGAGATCGTCAATCTCGGCTTTCCGCCG
GAGGACGAAAACCTGCCGCTGATGAACCGGCGCTGGTACCCGTATCCGGACGCGCAGGTGGCCGTGTTCGGCGCGCTGGC
GGCCGATGTCGTCGCGCAGCATCAGGTGCTGCCGCACAAGGTGGTCGGGCACTCGGACGTCGCGCCGGGCCGCAAGACCG
ATCCGGGGCCGCTGTTCCCGTGGAAGAAGCTCTACGATCAATACAAGATCGGCGCATGGCCGGAGGCGGAGGCCGTCGAT
TACTACCGCGTCAACCGGCCGTTCGCGGGCGACGTCGCGAGCCTGCAGTCGAAGCTGCTCGCGTACGGCTACGACACGCC
GCAGACGGGCACGCTCGACGCGCAGACCGTCAACGTCGTGTCGGCGTTCCAGATGCATTTCAGGCCGTCGCGTTACGACG
GCGTGCCGGATGTCGAGACCGTCGCGATTCTCGACGCGCTGCTCGAGAAGTACTTCAACCGCGGCCGCGCGATCAACAAG
CAGACGTTGCCGGGCGCAACCGCGCCGACGGGCGAGAAGGGCAGCGACGCGTGGCCGCTCGCGCCCGCGCCGTCGCGCTG
A

Upstream 100 bases:

>100_bases
GCGGACTCCCACGCTCGCGCGTCGCATCATCGCGCAACCTACTCGCTCGGCGCATCGCGCCGATTCTCAATCGCAAGTTA
CGACTCGAACGGAAAAGGGT

Downstream 100 bases:

>100_bases
CGTCGCCGGCGCCCGCGCGCCTTGCTGCGCCGCGAGACGGCGCAGCAAGGCCCGGTTGCGTTCGCGCTTGACCGCTTCGC
GCCTTCGCTTGCCCGCCTCG

Product: N-acetylmuramoyl-L-alanine amidase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 345

Protein sequence:

>346_residues
MAEEQQAKIINEGRRGFLARSSAWPVGMLMLPLAGCGDGDGDGVVPSAHAQDTPPPSGAGYTIDRSIQSPNQDSRVRTLV
LHYTAQTLADSIASLTSPQRQVSAHYLVPDAADDGRRFKVFELVPQARRAWHAGVSYWQGDRMLNAGSVGIEIVNLGFPP
EDENLPLMNRRWYPYPDAQVAVFGALAADVVAQHQVLPHKVVGHSDVAPGRKTDPGPLFPWKKLYDQYKIGAWPEAEAVD
YYRVNRPFAGDVASLQSKLLAYGYDTPQTGTLDAQTVNVVSAFQMHFRPSRYDGVPDVETVAILDALLEKYFNRGRAINK
QTLPGATAPTGEKGSDAWPLAPAPSR

Sequences:

>Translated_346_residues
MAEEQQAKIINEGRRGFLARSSAWPVGMLMLPLAGCGDGDGDGVVPSAHAQDTPPPSGAGYTIDRSIQSPNQDSRVRTLV
LHYTAQTLADSIASLTSPQRQVSAHYLVPDAADDGRRFKVFELVPQARRAWHAGVSYWQGDRMLNAGSVGIEIVNLGFPP
EDENLPLMNRRWYPYPDAQVAVFGALAADVVAQHQVLPHKVVGHSDVAPGRKTDPGPLFPWKKLYDQYKIGAWPEAEAVD
YYRVNRPFAGDVASLQSKLLAYGYDTPQTGTLDAQTVNVVSAFQMHFRPSRYDGVPDVETVAILDALLEKYFNRGRAINK
QTLPGATAPTGEKGSDAWPLAPAPSR
>Mature_345_residues
AEEQQAKIINEGRRGFLARSSAWPVGMLMLPLAGCGDGDGDGVVPSAHAQDTPPPSGAGYTIDRSIQSPNQDSRVRTLVL
HYTAQTLADSIASLTSPQRQVSAHYLVPDAADDGRRFKVFELVPQARRAWHAGVSYWQGDRMLNAGSVGIEIVNLGFPPE
DENLPLMNRRWYPYPDAQVAVFGALAADVVAQHQVLPHKVVGHSDVAPGRKTDPGPLFPWKKLYDQYKIGAWPEAEAVDY
YRVNRPFAGDVASLQSKLLAYGYDTPQTGTLDAQTVNVVSAFQMHFRPSRYDGVPDVETVAILDALLEKYFNRGRAINKQ
TLPGATAPTGEKGSDAWPLAPAPSR

Specific function: Unknown

COG id: COG3023

COG function: function code V; Negative regulator of beta-lactamase expression

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-acetylmuramoyl-L-alanine amidase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787092, Length=255, Percent_Identity=43.1372549019608, Blast_Score=187, Evalue=6e-49,
Organism=Escherichia coli, GI1786300, Length=124, Percent_Identity=34.6774193548387, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002502
- InterPro:   IPR002477 [H]

Pfam domain/function: PF01510 Amidase_2 [H]

EC number: =3.5.1.28 [H]

Molecular weight: Translated: 37716; Mature: 37585

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEEQQAKIINEGRRGFLARSSAWPVGMLMLPLAGCGDGDGDGVVPSAHAQDTPPPSGAG
CCCHHHHHHHHHCCCCEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
YTIDRSIQSPNQDSRVRTLVLHYTAQTLADSIASLTSPQRQVSAHYLVPDAADDGRRFKV
EEEECCCCCCCCCCHHEEEHHHHHHHHHHHHHHHHCCCHHHCCEEEECCCCCCCCCEEEH
FELVPQARRAWHAGVSYWQGDRMLNAGSVGIEIVNLGFPPEDENLPLMNRRWYPYPDAQV
HHHHHHHHHHHHHCCHHCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHH
AVFGALAADVVAQHQVLPHKVVGHSDVAPGRKTDPGPLFPWKKLYDQYKIGAWPEAEAVD
HHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC
YYRVNRPFAGDVASLQSKLLAYGYDTPQTGTLDAQTVNVVSAFQMHFRPSRYDGVPDVET
EEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHH
VAILDALLEKYFNRGRAINKQTLPGATAPTGEKGSDAWPLAPAPSR
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AEEQQAKIINEGRRGFLARSSAWPVGMLMLPLAGCGDGDGDGVVPSAHAQDTPPPSGAG
CCHHHHHHHHHCCCCEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
YTIDRSIQSPNQDSRVRTLVLHYTAQTLADSIASLTSPQRQVSAHYLVPDAADDGRRFKV
EEEECCCCCCCCCCHHEEEHHHHHHHHHHHHHHHHCCCHHHCCEEEECCCCCCCCCEEEH
FELVPQARRAWHAGVSYWQGDRMLNAGSVGIEIVNLGFPPEDENLPLMNRRWYPYPDAQV
HHHHHHHHHHHHHCCHHCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHH
AVFGALAADVVAQHQVLPHKVVGHSDVAPGRKTDPGPLFPWKKLYDQYKIGAWPEAEAVD
HHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC
YYRVNRPFAGDVASLQSKLLAYGYDTPQTGTLDAQTVNVVSAFQMHFRPSRYDGVPDVET
EEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHH
VAILDALLEKYFNRGRAINKQTLPGATAPTGEKGSDAWPLAPAPSR
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]