Click here to switch to the map view.

The map label for this gene is rbr [H]

Identifier: 126445768

GI number: 126445768

Start: 262414

End: 262836

Strand: Direct

Name: rbr [H]

Synonym: BMA10247_A0300

Alternate gene names: 126445768

Gene position: 262414-262836 (Clockwise)

Preceding gene: 126446700

Following gene: 126445967

Centisome position: 11.15

GC content: 63.36

Gene sequence:

>423_bases
ATGGCACAGCTCAAGGGCAGCAAGACCGAAGAGAACCTGAAATACGCGTTCGCCGGCGAATCTCAGGCGAATCGCCGCTA
CCTCTACTTCGCGTCGAAGGCGGACGTCGAGGGGCAGAACGACATCGCGGCGTTGTTCCGCTCGACCGCCGAGGGCGAAA
CGGGCCACGCGCACGGCCACCTCGAATACCTGGAAGCGGTCGGCGATCCGGCGACGGGGCTGCCGTTCGGCACATCCCGC
CAGAATCTGCAATCGGCGATAGCGGGCGAGACGCACGAGTACACCGATATGTATCCGGGCATGGCGAAGACTGCGCGCGA
CGAAGGCTTCGAAGAAATCGCCAATTGGTTCGAGACGCTCGCGAAAGCGGAGCGCAGCCACGCGAACCGGTATACGAAAG
CGCTCGACGGGCTCGTCGACTGA

Upstream 100 bases:

>100_bases
GCACGGTGCCCCGGCGGCGGCAGCCGATCTGCGCATCGTTCCCCACAATCGATCATCCGGCCCGGCGCGGCGCGCGCCGG
CTTCGGATAGGGAGGCGCAG

Downstream 100 bases:

>100_bases
GCGCGGCGCGCGCGCGCCGCACACGGTCAGCCGGGCGCGGCCGCGCGTGCGCGCCGCCCGCGCGATCCGGCGCAACGCGC
GCGCGCCGCGCGCAACGTGA

Product: rubrerythrin

Products: NA

Alternate protein names: RR [H]

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MAQLKGSKTEENLKYAFAGESQANRRYLYFASKADVEGQNDIAALFRSTAEGETGHAHGHLEYLEAVGDPATGLPFGTSR
QNLQSAIAGETHEYTDMYPGMAKTARDEGFEEIANWFETLAKAERSHANRYTKALDGLVD

Sequences:

>Translated_140_residues
MAQLKGSKTEENLKYAFAGESQANRRYLYFASKADVEGQNDIAALFRSTAEGETGHAHGHLEYLEAVGDPATGLPFGTSR
QNLQSAIAGETHEYTDMYPGMAKTARDEGFEEIANWFETLAKAERSHANRYTKALDGLVD
>Mature_139_residues
AQLKGSKTEENLKYAFAGESQANRRYLYFASKADVEGQNDIAALFRSTAEGETGHAHGHLEYLEAVGDPATGLPFGTSRQ
NLQSAIAGETHEYTDMYPGMAKTARDEGFEEIANWFETLAKAERSHANRYTKALDGLVD

Specific function: May provide oxidative stress protection via catalytic reduction of intracellular hydrogen peroxide [H]

COG id: COG1592

COG function: function code C; Rubrerythrin

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rubredoxin-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009040
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR004039
- InterPro:   IPR003251 [H]

Pfam domain/function: PF02915 Rubrerythrin [H]

EC number: NA

Molecular weight: Translated: 15395; Mature: 15264

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: PS50905 FERRITIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQLKGSKTEENLKYAFAGESQANRRYLYFASKADVEGQNDIAALFRSTAEGETGHAHGH
CCCCCCCCCCCCCEEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCHH
LEYLEAVGDPATGLPFGTSRQNLQSAIAGETHEYTDMYPGMAKTARDEGFEEIANWFETL
HHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHCCCHHHHHHHCCHHHHHHHHHHH
AKAERSHANRYTKALDGLVD
HHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AQLKGSKTEENLKYAFAGESQANRRYLYFASKADVEGQNDIAALFRSTAEGETGHAHGH
CCCCCCCCCCCCEEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCHH
LEYLEAVGDPATGLPFGTSRQNLQSAIAGETHEYTDMYPGMAKTARDEGFEEIANWFETL
HHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHCCCHHHHHHHCCHHHHHHHHHHH
AKAERSHANRYTKALDGLVD
HHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11972784; 12949112 [H]