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The map label for this gene is speB [H]

Identifier: 126446631

GI number: 126446631

Start: 624634

End: 625587

Strand: Reverse

Name: speB [H]

Synonym: BMA10247_A0674

Alternate gene names: 126446631

Gene position: 625587-624634 (Counterclockwise)

Preceding gene: 126446852

Following gene: 126446653

Centisome position: 26.59

GC content: 71.28

Gene sequence:

>954_bases
ATGTCGGATGACTACTTCCAGCCGCAAAGCGGCAACGCGATGCCGCGCTTCGCCGGCATCGCGACGATGATGCGGCTGCC
GCAGGCGGCGAGCGCCGCGGGGCTCGACGCGTGCTTTGTCGGCGTGCCGTTCGATCTCGGCACGTCGAACCGCACCGGCG
CGCGGTTCGGCCCGCGCCAGATCCGCAGCGAATCCGTGCTGCTGCGCCCGTACAACATGGCCACGCGCGCGGCGCCGTTC
GATTCGCTGCGCGTCGCCGATCTCGGCGACGTCGCGACGAACCCGTACAACCTCGCCGATTCGATCGCGCGGATCGAGGC
CGCGTACCACGCGATCCTCGCGCACGGCTGCCGCCCGGTCACGCTCGGCGGCGACCACACGATCACGCTGCCGATCCTGC
GTGCGATGCATCGCCGGCACGGGCGCGTCGGGCTCATCCACGTCGACGCGCACGCGGACGTCAACGACACGATGTTCGGC
GAGAAGATCGCGCACGGCACGCCGTTTCGCCGCGCGCTCGAGGAAGGGCTGCTCGACGGCGACCGCGTCGTGCAGATCGG
CTTGCGCGGCACCGGCTATGCGGCCGAGGATTTCGACTGGTGCCGCGATCAGGGCTTTCGCGTCGTCCAAGCCGAGGCGT
GCTGGAACCGCTCGCTCGCGCCGCTGATGGACGAAGTGCGCGCGCGCGTGCAAGGCGGCCCGGTCTATCTGAGCTTCGAC
ATCGACGGCATCGATCCGGCGTACGCGCCGGGCACCGGCACGCCGGAGATCGCCGGCCTCACGGTGCCGCAGGGCCTCGA
GATCGTGCGCGGCGCGTGGGGGCTCGACATCGTCGGCGCCGATCTCGTCGAGGTCGCGCCGCCGTACGATCCGTTCGGCA
CCACCGCGCTGCTCGGCGCGAACCTCGCTTACGAGATGCTCTGCGTGCTGCCCGGCGTGGCGCGGCGCGCGTGA

Upstream 100 bases:

>100_bases
TTCGAACTTCGGGATTCAAGTCGCCATTCTGGCGGCGTACAACGCCCCATGTCGGCGTATTCGCATGATACGGCGCGTTC
GATATGAGAGGGGAAAAACG

Downstream 100 bases:

>100_bases
CGCGCGCGGGCGCCCCATCGCCCCGGCCGTAACGGGCCGCGCGTGAAGCAGGCGTAGCGCCACGCGGACGGACGCACCCG
CTCGCGTGCGCGAACCTCGG

Product: agmatinase

Products: NA

Alternate protein names: GBase; D-arginase [H]

Number of amino acids: Translated: 317; Mature: 316

Protein sequence:

>317_residues
MSDDYFQPQSGNAMPRFAGIATMMRLPQAASAAGLDACFVGVPFDLGTSNRTGARFGPRQIRSESVLLRPYNMATRAAPF
DSLRVADLGDVATNPYNLADSIARIEAAYHAILAHGCRPVTLGGDHTITLPILRAMHRRHGRVGLIHVDAHADVNDTMFG
EKIAHGTPFRRALEEGLLDGDRVVQIGLRGTGYAAEDFDWCRDQGFRVVQAEACWNRSLAPLMDEVRARVQGGPVYLSFD
IDGIDPAYAPGTGTPEIAGLTVPQGLEIVRGAWGLDIVGADLVEVAPPYDPFGTTALLGANLAYEMLCVLPGVARRA

Sequences:

>Translated_317_residues
MSDDYFQPQSGNAMPRFAGIATMMRLPQAASAAGLDACFVGVPFDLGTSNRTGARFGPRQIRSESVLLRPYNMATRAAPF
DSLRVADLGDVATNPYNLADSIARIEAAYHAILAHGCRPVTLGGDHTITLPILRAMHRRHGRVGLIHVDAHADVNDTMFG
EKIAHGTPFRRALEEGLLDGDRVVQIGLRGTGYAAEDFDWCRDQGFRVVQAEACWNRSLAPLMDEVRARVQGGPVYLSFD
IDGIDPAYAPGTGTPEIAGLTVPQGLEIVRGAWGLDIVGADLVEVAPPYDPFGTTALLGANLAYEMLCVLPGVARRA
>Mature_316_residues
SDDYFQPQSGNAMPRFAGIATMMRLPQAASAAGLDACFVGVPFDLGTSNRTGARFGPRQIRSESVLLRPYNMATRAAPFD
SLRVADLGDVATNPYNLADSIARIEAAYHAILAHGCRPVTLGGDHTITLPILRAMHRRHGRVGLIHVDAHADVNDTMFGE
KIAHGTPFRRALEEGLLDGDRVVQIGLRGTGYAAEDFDWCRDQGFRVVQAEACWNRSLAPLMDEVRARVQGGPVYLSFDI
DGIDPAYAPGTGTPEIAGLTVPQGLEIVRGAWGLDIVGADLVEVAPPYDPFGTTALLGANLAYEMLCVLPGVARRA

Specific function: Catalyzes The Formation Of Putrescine From Agmatine. [C]

COG id: COG0010

COG function: function code E; Arginase/agmatinase/formimionoglutamate hydrolase, arginase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the arginase family. Agmatinase subfamily [H]

Homologues:

Organism=Homo sapiens, GI37537722, Length=307, Percent_Identity=62.5407166123778, Blast_Score=389, Evalue=1e-108,
Organism=Homo sapiens, GI10947139, Length=313, Percent_Identity=25.5591054313099, Blast_Score=91, Evalue=2e-18,
Organism=Escherichia coli, GI1789306, Length=295, Percent_Identity=42.0338983050847, Blast_Score=185, Evalue=4e-48,
Organism=Saccharomyces cerevisiae, GI6325146, Length=193, Percent_Identity=32.6424870466321, Blast_Score=76, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005925
- InterPro:   IPR006035
- InterPro:   IPR020855 [H]

Pfam domain/function: PF00491 Arginase [H]

EC number: =3.5.3.7; =3.5.3.10 [H]

Molecular weight: Translated: 34040; Mature: 33909

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: PS00147 ARGINASE_1 ; PS00148 ARGINASE_2 ; PS01053 ARGINASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDDYFQPQSGNAMPRFAGIATMMRLPQAASAAGLDACFVGVPFDLGTSNRTGARFGPRQ
CCCCCCCCCCCCCCHHHHHHHHHHHCCCHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHH
IRSESVLLRPYNMATRAAPFDSLRVADLGDVATNPYNLADSIARIEAAYHAILAHGCRPV
HCCCCEEEECCCCHHHCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEE
TLGGDHTITLPILRAMHRRHGRVGLIHVDAHADVNDTMFGEKIAHGTPFRRALEEGLLDG
EECCCCEEHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHCCCCC
DRVVQIGLRGTGYAAEDFDWCRDQGFRVVQAEACWNRSLAPLMDEVRARVQGGPVYLSFD
CEEEEEECCCCCCCCCCHHHHHHCCCEEEEEHHHHCCCHHHHHHHHHHHHCCCCEEEEEE
IDGIDPAYAPGTGTPEIAGLTVPQGLEIVRGAWGLDIVGADLVEVAPPYDPFGTTALLGA
CCCCCCCCCCCCCCCCEEEEECCCCHHHHHCCCCCEECCCHHHHCCCCCCCCCCHHHHHH
NLAYEMLCVLPGVARRA
HHHHHHHHHHCCHHHCC
>Mature Secondary Structure 
SDDYFQPQSGNAMPRFAGIATMMRLPQAASAAGLDACFVGVPFDLGTSNRTGARFGPRQ
CCCCCCCCCCCCCHHHHHHHHHHHCCCHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHH
IRSESVLLRPYNMATRAAPFDSLRVADLGDVATNPYNLADSIARIEAAYHAILAHGCRPV
HCCCCEEEECCCCHHHCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEE
TLGGDHTITLPILRAMHRRHGRVGLIHVDAHADVNDTMFGEKIAHGTPFRRALEEGLLDG
EECCCCEEHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHCCCCC
DRVVQIGLRGTGYAAEDFDWCRDQGFRVVQAEACWNRSLAPLMDEVRARVQGGPVYLSFD
CEEEEEECCCCCCCCCCHHHHHHCCCEEEEEHHHHCCCHHHHHHHHHHHHCCCCEEEEEE
IDGIDPAYAPGTGTPEIAGLTVPQGLEIVRGAWGLDIVGADLVEVAPPYDPFGTTALLGA
CCCCCCCCCCCCCCCCEEEEECCCCHHHHHCCCCCEECCCHHHHCCCCCCCCCCHHHHHH
NLAYEMLCVLPGVARRA
HHHHHHHHHHCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA