| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
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The map label for this gene is 126445517
Identifier: 126445517
GI number: 126445517
Start: 1336962
End: 1338653
Strand: Reverse
Name: 126445517
Synonym: BURPS668_A1426
Alternate gene names: NA
Gene position: 1338653-1336962 (Counterclockwise)
Preceding gene: 126443305
Following gene: 126443097
Centisome position: 42.8
GC content: 70.74
Gene sequence:
>1692_bases ATGAACAAGAAACGTAGTAATCCTGAACAGACGCGGCTTGGCCAGGTCCGTGCCGTCGCCGGCATTCTCTCCATGTCCGT CCTCGTTCCGCTCGCCGGTTGCGGCGGCGGTGGCGACGGAGGCGGAAGCGGCACGCCGTCGGCCGCCGCGCAGCCGACCC CCGCGCCGGCGCCGGCGCCGGCCCCGGCACCCGCGCCGAGCTCGGGTTCGTCGCAATCCACCAATTCGTCGACCTCGACG GCGGCCTGCCCCGTCACGCAGGCCGCCTCGACCGCCGCCAGCGAAACGCTCGTCACCCGCACCGTTTCGCACGAAGCGCC CGTCGATCATCTGATCGTCAAGCTGCAACGCACGGCGGCGGCGAGCGCATCCGGCGCGCGCATCATGGCCGCGGCGAACG ACGCGGCCCGACTCGATTCGGTGATCCAGCGCGTGATGTCGCAATGGAGCGCGAAGAGCGGCGCCGTTCGCTCGTATGCG CAGAACATCGCGCCGACGAACGCGGTGCAGGTGGAACGGACGATGTCGGACGGTGCCGCGCTGCTCGCGCTCGGACAAAA GATGAGCGCGGATAATGCCGGCGCTCTCGCGCAAACGTTCGCGGCCGATCCGGACGTCGCCTATGCGGAGCCCGACCGGC GCGTGTTCGCCCGCACGGTGGCGACCGACCCGGACTACGCGCAGCAGTGGAACTACTTCGATCCGGCGGCCGGCATCAAT CTGCCGGACGCATGGAACGTGACGAACGGCCTGCCGAGCGTCGTCACCGCGGTGCTCGACACCGGCTATCGCCCGCATCC GGACATCATCGCGAACCTGCTGCCGGGCTACGATTTCATCTCCGACATCAACACCGGCAACAACGGCCACGGCCGCGGCC CGGATGCGACCGACCCGGGCGACTGGGTCACGCAGCAGGAACTGACCGATCCGTCGAGCCCGTTCTACCAATGCGCGAGC GCGCCGTCGAACAGCAGCTGGCACGGCACGCAGGTCGCCGGCATCATCGGCGCCGCCGCGAACAACGGCATCGGCATCGC GGGCGTCAGCTGGTACGGCAAGATCCTGCCCGTGCGCGTGCTCGGCAAGTGCGGCGGCACGACGAGCGACATCGCCGACG CGATGCGCTGGGCGGCGGGCATTCCCGTCGCGGGCGCGCCGACGAACCTCACGCCGGCGAAGGTGATCAACCTGAGCCTC GGCGGCACCGGCCCGTGCGGCGACACGTTCCAGCAGGCGATCAACGACGTGATCGCGCGCGGCACGACCGTCGTCGTCTC GGCCGGCAACGACGGCCAGGCGACGACGCTGGACCGCCCGGCCAACTGCAAGGGCGTGATCTCGGTCGGCGCGACCGACA GCACCGGCCAGCGCGCGTGGTACAGCAACTTCGGCTCGGACATCACGCTGAGCGCGCCGGGCTCGAACATCCTGTCGACG AGCAATGCGGGCACCACGGTGCCGACCACCGACGCGTACGGCACGCACAGCGGCACGAGCCTTGCCGCGCCGCAGGTGGC GGGCGTCGCCTCGCTGATGCTCGCGGTCAACCCGAACCTCACGCCCGCGCAGATCGCGCAGAAGCTCGCGAGCACCGCGC GGCCGTCGCCGGCCACCGCATCCTGCCTCGCGCGCGCGCCGGGCGCGGGCATCGTCGACGCCGGCACGGTGGTTGCGTCC GCAACGAAATAG
Upstream 100 bases:
>100_bases GCGACGAAGAATGAGGATCGTGCTCGCGAAACCCTCACGCCACGGGTCTTGACCGCGTTGACCGCGCATGCGGTATCGAA CCCAAGAGTGGAGAGGCCCC
Downstream 100 bases:
>100_bases CGTCGCGTCCCGAACGCGCTCTTGCGGCGGCCGCCCGAACGGGCGGCCGTCTTTCTTCGGTTCGCGGCCGCGCCGGCGGC AATGCGCCGCCTCGCGCGCA
Product: putative serine metalloprotease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 563; Mature: 563
Protein sequence:
>563_residues MNKKRSNPEQTRLGQVRAVAGILSMSVLVPLAGCGGGGDGGGSGTPSAAAQPTPAPAPAPAPAPAPSSGSSQSTNSSTST AACPVTQAASTAASETLVTRTVSHEAPVDHLIVKLQRTAAASASGARIMAAANDAARLDSVIQRVMSQWSAKSGAVRSYA QNIAPTNAVQVERTMSDGAALLALGQKMSADNAGALAQTFAADPDVAYAEPDRRVFARTVATDPDYAQQWNYFDPAAGIN LPDAWNVTNGLPSVVTAVLDTGYRPHPDIIANLLPGYDFISDINTGNNGHGRGPDATDPGDWVTQQELTDPSSPFYQCAS APSNSSWHGTQVAGIIGAAANNGIGIAGVSWYGKILPVRVLGKCGGTTSDIADAMRWAAGIPVAGAPTNLTPAKVINLSL GGTGPCGDTFQQAINDVIARGTTVVVSAGNDGQATTLDRPANCKGVISVGATDSTGQRAWYSNFGSDITLSAPGSNILST SNAGTTVPTTDAYGTHSGTSLAAPQVAGVASLMLAVNPNLTPAQIAQKLASTARPSPATASCLARAPGAGIVDAGTVVAS ATK
Sequences:
>Translated_563_residues MNKKRSNPEQTRLGQVRAVAGILSMSVLVPLAGCGGGGDGGGSGTPSAAAQPTPAPAPAPAPAPAPSSGSSQSTNSSTST AACPVTQAASTAASETLVTRTVSHEAPVDHLIVKLQRTAAASASGARIMAAANDAARLDSVIQRVMSQWSAKSGAVRSYA QNIAPTNAVQVERTMSDGAALLALGQKMSADNAGALAQTFAADPDVAYAEPDRRVFARTVATDPDYAQQWNYFDPAAGIN LPDAWNVTNGLPSVVTAVLDTGYRPHPDIIANLLPGYDFISDINTGNNGHGRGPDATDPGDWVTQQELTDPSSPFYQCAS APSNSSWHGTQVAGIIGAAANNGIGIAGVSWYGKILPVRVLGKCGGTTSDIADAMRWAAGIPVAGAPTNLTPAKVINLSL GGTGPCGDTFQQAINDVIARGTTVVVSAGNDGQATTLDRPANCKGVISVGATDSTGQRAWYSNFGSDITLSAPGSNILST SNAGTTVPTTDAYGTHSGTSLAAPQVAGVASLMLAVNPNLTPAQIAQKLASTARPSPATASCLARAPGAGIVDAGTVVAS ATK >Mature_563_residues MNKKRSNPEQTRLGQVRAVAGILSMSVLVPLAGCGGGGDGGGSGTPSAAAQPTPAPAPAPAPAPAPSSGSSQSTNSSTST AACPVTQAASTAASETLVTRTVSHEAPVDHLIVKLQRTAAASASGARIMAAANDAARLDSVIQRVMSQWSAKSGAVRSYA QNIAPTNAVQVERTMSDGAALLALGQKMSADNAGALAQTFAADPDVAYAEPDRRVFARTVATDPDYAQQWNYFDPAAGIN LPDAWNVTNGLPSVVTAVLDTGYRPHPDIIANLLPGYDFISDINTGNNGHGRGPDATDPGDWVTQQELTDPSSPFYQCAS APSNSSWHGTQVAGIIGAAANNGIGIAGVSWYGKILPVRVLGKCGGTTSDIADAMRWAAGIPVAGAPTNLTPAKVINLSL GGTGPCGDTFQQAINDVIARGTTVVVSAGNDGQATTLDRPANCKGVISVGATDSTGQRAWYSNFGSDITLSAPGSNILST SNAGTTVPTTDAYGTHSGTSLAAPQVAGVASLMLAVNPNLTPAQIAQKLASTARPSPATASCLARAPGAGIVDAGTVVAS ATK
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
Organism=Homo sapiens, GI20336180, Length=421, Percent_Identity=28.2660332541568, Blast_Score=84, Evalue=3e-16, Organism=Homo sapiens, GI4505577, Length=420, Percent_Identity=27.8571428571429, Blast_Score=84, Evalue=3e-16, Organism=Homo sapiens, GI20336182, Length=412, Percent_Identity=27.4271844660194, Blast_Score=84, Evalue=5e-16, Organism=Homo sapiens, GI20336190, Length=423, Percent_Identity=27.6595744680851, Blast_Score=83, Evalue=6e-16, Organism=Homo sapiens, GI20336184, Length=412, Percent_Identity=27.4271844660194, Blast_Score=83, Evalue=7e-16, Organism=Homo sapiens, GI27894285, Length=422, Percent_Identity=27.2511848341232, Blast_Score=83, Evalue=7e-16, Organism=Homo sapiens, GI20336188, Length=422, Percent_Identity=27.2511848341232, Blast_Score=83, Evalue=7e-16, Organism=Homo sapiens, GI299523015, Length=389, Percent_Identity=26.2210796915167, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI76443679, Length=433, Percent_Identity=26.5588914549654, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI20336186, Length=391, Percent_Identity=27.3657289002558, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI20336246, Length=389, Percent_Identity=26.2210796915167, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI20336242, Length=375, Percent_Identity=26.1333333333333, Blast_Score=66, Evalue=8e-11, Organism=Caenorhabditis elegans, GI71983555, Length=362, Percent_Identity=26.2430939226519, Blast_Score=75, Evalue=7e-14, Organism=Caenorhabditis elegans, GI25141268, Length=362, Percent_Identity=26.2430939226519, Blast_Score=75, Evalue=9e-14, Organism=Caenorhabditis elegans, GI71987206, Length=363, Percent_Identity=29.2011019283747, Blast_Score=72, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6320775, Length=218, Percent_Identity=33.9449541284404, Blast_Score=92, Evalue=3e-19, Organism=Saccharomyces cerevisiae, GI6324576, Length=194, Percent_Identity=32.9896907216495, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI281360987, Length=402, Percent_Identity=25.3731343283582, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI24642494, Length=402, Percent_Identity=25.3731343283582, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI24642490, Length=402, Percent_Identity=25.3731343283582, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI45555723, Length=402, Percent_Identity=25.3731343283582, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI24642492, Length=402, Percent_Identity=25.3731343283582, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI24642488, Length=404, Percent_Identity=25, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI24642484, Length=404, Percent_Identity=25, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI24642486, Length=404, Percent_Identity=25, Blast_Score=72, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007280 - InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 [H]
Pfam domain/function: PF00082 Peptidase_S8; PF04151 PPC [H]
EC number: NA
Molecular weight: Translated: 56532; Mature: 56532
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: PS00137 SUBTILASE_HIS ; PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKKRSNPEQTRLGQVRAVAGILSMSVLVPLAGCGGGGDGGGSGTPSAAAQPTPAPAPAP CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC APAPAPSSGSSQSTNSSTSTAACPVTQAASTAASETLVTRTVSHEAPVDHLIVKLQRTAA CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH ASASGARIMAAANDAARLDSVIQRVMSQWSAKSGAVRSYAQNIAPTNAVQVERTMSDGAA CCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEEEEHHHCCCCE LLALGQKMSADNAGALAQTFAADPDVAYAEPDRRVFARTVATDPDYAQQWNYFDPAAGIN EEHHCCCCCCCCCCHHHHHHCCCCCCEECCCCHHHHHHHHCCCCCHHHHCCCCCCCCCCC LPDAWNVTNGLPSVVTAVLDTGYRPHPDIIANLLPGYDFISDINTGNNGHGRGPDATDPG CCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCC DWVTQQELTDPSSPFYQCASAPSNSSWHGTQVAGIIGAAANNGIGIAGVSWYGKILPVRV CCCCHHHCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHH LGKCGGTTSDIADAMRWAAGIPVAGAPTNLTPAKVINLSLGGTGPCGDTFQQAINDVIAR HHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHC GTTVVVSAGNDGQATTLDRPANCKGVISVGATDSTGQRAWYSNFGSDITLSAPGSNILST CCEEEEECCCCCCCEECCCCCCCCEEEEECCCCCCCCHHHHHCCCCCEEEECCCCCCEEC SNAGTTVPTTDAYGTHSGTSLAAPQVAGVASLMLAVNPNLTPAQIAQKLASTARPSPATA CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEECCCCCHHHHHHHHHHHCCCCCCHH SCLARAPGAGIVDAGTVVASATK HHHHHCCCCCEEECCCEEEECCC >Mature Secondary Structure MNKKRSNPEQTRLGQVRAVAGILSMSVLVPLAGCGGGGDGGGSGTPSAAAQPTPAPAPAP CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC APAPAPSSGSSQSTNSSTSTAACPVTQAASTAASETLVTRTVSHEAPVDHLIVKLQRTAA CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH ASASGARIMAAANDAARLDSVIQRVMSQWSAKSGAVRSYAQNIAPTNAVQVERTMSDGAA CCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEEEEHHHCCCCE LLALGQKMSADNAGALAQTFAADPDVAYAEPDRRVFARTVATDPDYAQQWNYFDPAAGIN EEHHCCCCCCCCCCHHHHHHCCCCCCEECCCCHHHHHHHHCCCCCHHHHCCCCCCCCCCC LPDAWNVTNGLPSVVTAVLDTGYRPHPDIIANLLPGYDFISDINTGNNGHGRGPDATDPG CCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCC DWVTQQELTDPSSPFYQCASAPSNSSWHGTQVAGIIGAAANNGIGIAGVSWYGKILPVRV CCCCHHHCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHH LGKCGGTTSDIADAMRWAAGIPVAGAPTNLTPAKVINLSLGGTGPCGDTFQQAINDVIAR HHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHC GTTVVVSAGNDGQATTLDRPANCKGVISVGATDSTGQRAWYSNFGSDITLSAPGSNILST CCEEEEECCCCCCCEECCCCCCCCEEEEECCCCCCCCHHHHHCCCCCEEEECCCCCCEEC SNAGTTVPTTDAYGTHSGTSLAAPQVAGVASLMLAVNPNLTPAQIAQKLASTARPSPATA CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEECCCCCHHHHHHHHHHHCCCCCCHH SCLARAPGAGIVDAGTVVASATK HHHHHCCCCCEEECCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2187155; 12024217 [H]