| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
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The map label for this gene is 126445205
Identifier: 126445205
GI number: 126445205
Start: 1901281
End: 1901832
Strand: Reverse
Name: 126445205
Synonym: BURPS668_A1963
Alternate gene names: NA
Gene position: 1901832-1901281 (Counterclockwise)
Preceding gene: 126442400
Following gene: 126444675
Centisome position: 60.81
GC content: 68.84
Gene sequence:
>552_bases ATGCGCGAGACGAACGACAAACAGCAGCGCGGGAACGTCACGCAACGGCACGACACGCCGGCTGCGCCGGGCGGCAACCG GGTCACGCAGGCATTCGAGCGGTTCGCCGCGCGCGTCACGCAGTGGGCCGGCTCGCCCGTCGCGTTCGGCGTCGCGGTCG CGATCACGATCGGATGGCTCGCGTGCGGGCCGCTCGTCCATTTCTCCGACGCGTGGCAGCTCGTCATCAACACCGGTACG ACGATCATCACGTTTCTGATGGTGTTCCTGCTCCAGCGCAACCAGAATCGGGACAGCGTCGCGCTGCATCTGAAGCTCGA CGAGCTGGTCGCGGCGACGAAATCCGCGAGCAACCGGCTGATCGGCATCGAGGATGCGTCGGAGGACGAGCTCAAGCGGC TTGCGCACGCCTATCTGGAGCTCGCGCTGCGGGCGCGGACGCTGCGCGAGACGAGCGGCGAGCCCGCGCGGCGGGACGCG GACGACGACAGTGACGGTGACGGAGACGACGCCGCGAGCGAGGCGCAAGAGCGTCCTACGCCCGCCGATTGA
Upstream 100 bases:
>100_bases TACCGGTTCGCGCATGCGGGGCGGGCGGCGCGCCCCCGCCGGCGACGCGCGAGCGGGCGGCGACGGAGGACCGTTTCGCC GCTTTCATGGAGAGCGGATC
Downstream 100 bases:
>100_bases CGCGGGCGCGGCCCGGTGCGGCGCGCGCGGCGGCGGCATCCGCGAACCGAGGCGCGCACCGATGAAGCACGCTTCGATTC GTCCGTGCCGGTGCGCATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MRETNDKQQRGNVTQRHDTPAAPGGNRVTQAFERFAARVTQWAGSPVAFGVAVAITIGWLACGPLVHFSDAWQLVINTGT TIITFLMVFLLQRNQNRDSVALHLKLDELVAATKSASNRLIGIEDASEDELKRLAHAYLELALRARTLRETSGEPARRDA DDDSDGDGDDAASEAQERPTPAD
Sequences:
>Translated_183_residues MRETNDKQQRGNVTQRHDTPAAPGGNRVTQAFERFAARVTQWAGSPVAFGVAVAITIGWLACGPLVHFSDAWQLVINTGT TIITFLMVFLLQRNQNRDSVALHLKLDELVAATKSASNRLIGIEDASEDELKRLAHAYLELALRARTLRETSGEPARRDA DDDSDGDGDDAASEAQERPTPAD >Mature_183_residues MRETNDKQQRGNVTQRHDTPAAPGGNRVTQAFERFAARVTQWAGSPVAFGVAVAITIGWLACGPLVHFSDAWQLVINTGT TIITFLMVFLLQRNQNRDSVALHLKLDELVAATKSASNRLIGIEDASEDELKRLAHAYLELALRARTLRETSGEPARRDA DDDSDGDGDDAASEAQERPTPAD
Specific function: Unknown
COG id: COG5478
COG function: function code S; Predicted small integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19980; Mature: 19980
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRETNDKQQRGNVTQRHDTPAAPGGNRVTQAFERFAARVTQWAGSPVAFGVAVAITIGWL CCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH ACGPLVHFSDAWQLVINTGTTIITFLMVFLLQRNQNRDSVALHLKLDELVAATKSASNRL HHCCHHHHCCHHEEEECCCHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHCCCCE IGIEDASEDELKRLAHAYLELALRARTLRETSGEPARRDADDDSDGDGDDAASEAQERPT EECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCC PAD CCC >Mature Secondary Structure MRETNDKQQRGNVTQRHDTPAAPGGNRVTQAFERFAARVTQWAGSPVAFGVAVAITIGWL CCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH ACGPLVHFSDAWQLVINTGTTIITFLMVFLLQRNQNRDSVALHLKLDELVAATKSASNRL HHCCHHHHCCHHEEEECCCHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHCCCCE IGIEDASEDELKRLAHAYLELALRARTLRETSGEPARRDADDDSDGDGDDAASEAQERPT EECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCC PAD CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA