| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
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The map label for this gene is 126445027
Identifier: 126445027
GI number: 126445027
Start: 1621698
End: 1622759
Strand: Reverse
Name: 126445027
Synonym: BURPS668_A1676
Alternate gene names: NA
Gene position: 1622759-1621698 (Counterclockwise)
Preceding gene: 126444772
Following gene: 126442826
Centisome position: 51.89
GC content: 70.62
Gene sequence:
>1062_bases ATGCACGCTCCATCGACGACCCTGAAGCTGGCCCGACGCCAGACGATCAACGTGACGGCCGACAGCATGGTCCGCGCGCG GCCGCTGTTCGAGGACGGCGCGCTGCCGCTCGTCGTGGAGCCCGAGCTGGCGGGCGTGGACGCGCCCGCATGGATCGAGC GGCACGGTGACGCGCTCGCCGGCTGGCTCCCGCGCCACGGCGCGATTCTGTTTCGCGGCTTCGGCATCGCCGACGAAGCG GCGTTTCAGCGCGCGGTCGCCGCCACCGGCGTGCGCCTGATGAGCTACATCGAGAAGGCGACGCCGCGCGAGCATCTCGG GCGGCACATCTACACGTCGACGTATTTTCCGCAGGAGTACGCGATCGCGCTGCACAACGAGCTGTCGTACGTGAAGGCGT GGCCCGGCCGGATCTTCTTCTGTTGCACGGCGCCGGCCGCGACGGGCGGTGCGACGCCGCTCGCCGACGTGCGCCGCGTG CTCGGCCGCATCGATCCCGCGGTACGCGACGAATTCCGCCGGCGCGGCTGGCAGCTCGCGCGCTGTTTCGGCTCGGGAAT GGGGCCGAGCTGGCGGCACGCGTACGCGGTCGAGTCGGTCGACGAACTCGAGCGCTATCTGCGCGCGATGGACGTGTCGT GGCAATGGCTGCCGAACGGCTGGCTGCGCACGCGCCAGGTTCGGCCGGCGATCCACACGCACCCGCGCACGGGCGACGCG CTGTGGTTCAACCACGTCGCGTTCTGGCATGCGTCGAGCCTGCACGAGCCGGTGCGCCGCCGCTTCGAGGCGGACTTCGG CGTCGAGAGCCTGCCGTACAACACCTATTACGGCGACGGCGGGACGATTCCCGACGACGTCGCCGCTCATCTGCGCGACG CGTATGCGCGCGAGACGGTCGCGTTCCCGTGGAGGAAGGGCGATTTCCTGATCGCGGACAACATGCTGATCGCGCACGGC CGCGCGCCGTTTACCGGCGAGCGTCGCGTGCTGGCCGCGATGGGGGACGCCGTCGAGCTGGATGCGCGCGAGATGGCGGC GCTTCGGGAGCGTCTCGCATGA
Upstream 100 bases:
>100_bases CCGCCCGCGCCGCCGCCGGATTCGCCCGGCGAGCTGGATGCGGACGACCTGGCCGCACTGGCCGCAAGCCGTTGAGCACA CGCCACCGAGGACCATCGAC
Downstream 100 bases:
>100_bases GCGCGACGAGCGAGACCGCGCTGCACGGCTTCCGGCTGTCGCCCGTGCAGCAGCGTGTGTGGACCTTGACGGACGCGGGG CGGCTGCCGGCCGCGCAACG
Product: condensation domain-containing protein
Products: NA
Alternate protein names: SyrP Protein; SyrP-Like Protein; Non-Ribosomal Peptide Synthetase; Regulatory Protein B; Regulatory Protein; Amino Acid Adenylation Domain Protein; Taurine Catabolism Dioxygenase TauD/TfdA Family; Pyoverdine Biosynthesis Regulatory Gene; Amino Acid Adenylation Domain-Containing Protein; Condensation Domain-Containing Protein; Taurine Catabolism Dioxygenase TauD TfdA Family; Syrp Like Protein Albicidin Biosynthesis Regulation; Taurine Catabolism Dioxygenase Taud/Tfda; Regulatory Protein SyrP-Like; SyrP-Like Regulatory Protein; NRPS-Like Protein; Syringomycin Biosynthesis ; Pyoverdine Biosynthesis Regulatory Protein SyrP-Like; Peptide Synthase; Syringomycin Biosynthesis; Oxidoreductase; Transcriptional Regulator; Clavaminic Acid Synthetase-Like Protein; Pyoverdine Biosynthesis Regulatory Gene SyrP-Like; Syringomycin Synthesis Regulator SyrP; Non Ribosomal Peptide Synthase Antibiotic Synthesis; Multi-Domain Non-Ribosomal Peptide Synthetase
Number of amino acids: Translated: 353; Mature: 353
Protein sequence:
>353_residues MHAPSTTLKLARRQTINVTADSMVRARPLFEDGALPLVVEPELAGVDAPAWIERHGDALAGWLPRHGAILFRGFGIADEA AFQRAVAATGVRLMSYIEKATPREHLGRHIYTSTYFPQEYAIALHNELSYVKAWPGRIFFCCTAPAATGGATPLADVRRV LGRIDPAVRDEFRRRGWQLARCFGSGMGPSWRHAYAVESVDELERYLRAMDVSWQWLPNGWLRTRQVRPAIHTHPRTGDA LWFNHVAFWHASSLHEPVRRRFEADFGVESLPYNTYYGDGGTIPDDVAAHLRDAYARETVAFPWRKGDFLIADNMLIAHG RAPFTGERRVLAAMGDAVELDAREMAALRERLA
Sequences:
>Translated_353_residues MHAPSTTLKLARRQTINVTADSMVRARPLFEDGALPLVVEPELAGVDAPAWIERHGDALAGWLPRHGAILFRGFGIADEA AFQRAVAATGVRLMSYIEKATPREHLGRHIYTSTYFPQEYAIALHNELSYVKAWPGRIFFCCTAPAATGGATPLADVRRV LGRIDPAVRDEFRRRGWQLARCFGSGMGPSWRHAYAVESVDELERYLRAMDVSWQWLPNGWLRTRQVRPAIHTHPRTGDA LWFNHVAFWHASSLHEPVRRRFEADFGVESLPYNTYYGDGGTIPDDVAAHLRDAYARETVAFPWRKGDFLIADNMLIAHG RAPFTGERRVLAAMGDAVELDAREMAALRERLA >Mature_353_residues MHAPSTTLKLARRQTINVTADSMVRARPLFEDGALPLVVEPELAGVDAPAWIERHGDALAGWLPRHGAILFRGFGIADEA AFQRAVAATGVRLMSYIEKATPREHLGRHIYTSTYFPQEYAIALHNELSYVKAWPGRIFFCCTAPAATGGATPLADVRRV LGRIDPAVRDEFRRRGWQLARCFGSGMGPSWRHAYAVESVDELERYLRAMDVSWQWLPNGWLRTRQVRPAIHTHPRTGDA LWFNHVAFWHASSLHEPVRRRFEADFGVESLPYNTYYGDGGTIPDDVAAHLRDAYARETVAFPWRKGDFLIADNMLIAHG RAPFTGERRVLAAMGDAVELDAREMAALRERLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39683; Mature: 39683
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHAPSTTLKLARRQTINVTADSMVRARPLFEDGALPLVVEPELAGVDAPAWIERHGDALA CCCCHHHHHHHHHCEEECCHHHHHHHCCCCCCCCCEEEECCCCCCCCCCHHHHHCCCHHH GWLPRHGAILFRGFGIADEAAFQRAVAATGVRLMSYIEKATPREHLGRHIYTSTYFPQEY HCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCEEEECCCCCHHH AIALHNELSYVKAWPGRIFFCCTAPAATGGATPLADVRRVLGRIDPAVRDEFRRRGWQLA HHHHHCCHHHEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHH RCFGSGMGPSWRHAYAVESVDELERYLRAMDVSWQWLPNGWLRTRQVRPAIHTHPRTGDA HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHECCCCCCHHHCCCCCCCC LWFNHVAFWHASSLHEPVRRRFEADFGVESLPYNTYYGDGGTIPDDVAAHLRDAYARETV HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHE AFPWRKGDFLIADNMLIAHGRAPFTGERRVLAAMGDAVELDAREMAALRERLA ECCCCCCCEEEECCEEEECCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MHAPSTTLKLARRQTINVTADSMVRARPLFEDGALPLVVEPELAGVDAPAWIERHGDALA CCCCHHHHHHHHHCEEECCHHHHHHHCCCCCCCCCEEEECCCCCCCCCCHHHHHCCCHHH GWLPRHGAILFRGFGIADEAAFQRAVAATGVRLMSYIEKATPREHLGRHIYTSTYFPQEY HCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCEEEECCCCCHHH AIALHNELSYVKAWPGRIFFCCTAPAATGGATPLADVRRVLGRIDPAVRDEFRRRGWQLA HHHHHCCHHHEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHH RCFGSGMGPSWRHAYAVESVDELERYLRAMDVSWQWLPNGWLRTRQVRPAIHTHPRTGDA HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHECCCCCCHHHCCCCCCCC LWFNHVAFWHASSLHEPVRRRFEADFGVESLPYNTYYGDGGTIPDDVAAHLRDAYARETV HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHE AFPWRKGDFLIADNMLIAHGRAPFTGERRVLAAMGDAVELDAREMAALRERLA ECCCCCCCEEEECCEEEECCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA