| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
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The map label for this gene is 126445019
Identifier: 126445019
GI number: 126445019
Start: 1926813
End: 1927340
Strand: Reverse
Name: 126445019
Synonym: BURPS668_A1989
Alternate gene names: NA
Gene position: 1927340-1926813 (Counterclockwise)
Preceding gene: 126442369
Following gene: 126445338
Centisome position: 61.63
GC content: 65.91
Gene sequence:
>528_bases ATGGCGGGGCTGAGCAAATCAATGATGCGTGAGCGCCGCGCAATGGCGTTTGCGCGAGCGCTCGAGCGGCGCCGCAGGCT GGATGCGGTATTGCGTGAAGAGCTTGCCGAGCGGCGCACCCGGCTGCAATCGCTTGACAGGGTGTTGAAAGAAAAAGTCA GCCAGGTCGAGCTGAAAGCGGACGACGTGCATCGCCACGCCGCCCGGATCGACACCCTGATGACCGGAACCGCGTCGTTC TCGCTGGATGAATTGACGGCCTGTCGCGCGTACCTCGACGTCGCCGGAGCGCATCTGCGCGCGCTCGAGAGCGAGGAGGC GCGGCTGCGCGCTGAGTTCGGTGCGCTCGCCGCCGCGATCGAGGAAAAGAAGCTTGAGATCGGACGCAATCTGAGCCGTA TCGATGCCTGCGACGCGCGCATCGAGCAGATTCGCCGGCATGGTGAGCGGGCGGCCGACGAGGCGCTCGACGAGGAAATG GAAGAAGCCGCGCTCGGCGCGCGCATGCGGAACAGGGGGGCAGCTTGA
Upstream 100 bases:
>100_bases AGGCCGACGCGATTCGATCTTTTTTTTCGCAACGAACGGACGATTACGCGGCCGCCGAGGACACCATCGCCAGGCTGTAT GCGTTGAGCGGGGCGAACTG
Downstream 100 bases:
>100_bases CGCCTGCGCTTTTTGCTTTGCAGGGTTGGGCCGGCGCGCTGCTCGATGATGTCACGCTGCTCGCCATCTGCTCGGTTCGC CTCTATATCGTGATGTCCGT
Product: putative type III secretion protein HrpB7
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MAGLSKSMMRERRAMAFARALERRRRLDAVLREELAERRTRLQSLDRVLKEKVSQVELKADDVHRHAARIDTLMTGTASF SLDELTACRAYLDVAGAHLRALESEEARLRAEFGALAAAIEEKKLEIGRNLSRIDACDARIEQIRRHGERAADEALDEEM EEAALGARMRNRGAA
Sequences:
>Translated_175_residues MAGLSKSMMRERRAMAFARALERRRRLDAVLREELAERRTRLQSLDRVLKEKVSQVELKADDVHRHAARIDTLMTGTASF SLDELTACRAYLDVAGAHLRALESEEARLRAEFGALAAAIEEKKLEIGRNLSRIDACDARIEQIRRHGERAADEALDEEM EEAALGARMRNRGAA >Mature_174_residues AGLSKSMMRERRAMAFARALERRRRLDAVLREELAERRTRLQSLDRVLKEKVSQVELKADDVHRHAARIDTLMTGTASFS LDELTACRAYLDVAGAHLRALESEEARLRAEFGALAAAIEEKKLEIGRNLSRIDACDARIEQIRRHGERAADEALDEEME EAALGARMRNRGAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19741; Mature: 19610
Theoretical pI: Translated: 8.26; Mature: 8.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGLSKSMMRERRAMAFARALERRRRLDAVLREELAERRTRLQSLDRVLKEKVSQVELKA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DDVHRHAARIDTLMTGTASFSLDELTACRAYLDVAGAHLRALESEEARLRAEFGALAAAI HHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEKKLEIGRNLSRIDACDARIEQIRRHGERAADEALDEEMEEAALGARMRNRGAA HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AGLSKSMMRERRAMAFARALERRRRLDAVLREELAERRTRLQSLDRVLKEKVSQVELKA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DDVHRHAARIDTLMTGTASFSLDELTACRAYLDVAGAHLRALESEEARLRAEFGALAAAI HHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEKKLEIGRNLSRIDACDARIEQIRRHGERAADEALDEEMEEAALGARMRNRGAA HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA