| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
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The map label for this gene is dhbE [H]
Identifier: 126444853
GI number: 126444853
Start: 848201
End: 849844
Strand: Reverse
Name: dhbE [H]
Synonym: BURPS668_A0874
Alternate gene names: 126444853
Gene position: 849844-848201 (Counterclockwise)
Preceding gene: 126444420
Following gene: 126443306
Centisome position: 27.17
GC content: 72.26
Gene sequence:
>1644_bases TTGCCCGCCGCCGCGCGCAACGCCGCGTCGAGCGACGCGCCCGACTGGCCCGACGACTTCGCGCGCCGCTACCGCGACGC CGGCTACTGGCGAGACGAGACCTTCTACGGCGCGCTCGCCGAGCGCGCGCGGCGCAGCCCCACCGCGACCGCGGTCGTCG ACGGCGAGCGCCGCGTCAGCTACCGCGCGCTGCTCGAGCGCATCCGGCGTCTCGCCGGCGGCTTGCGCCGCCTGGGCCTC GCGCGCGGCGACACGGCCGTCGTGCATCTGCCGAACGGCGTGCGCTTCATCGAAGCGTGCTTCGCGCTGTTCCAGCTCGG CGTGCGCCCGGTGCTCGCGCTGCCCGCGCATCGGCAACACGAGATCGGCGCGTTCTGCCGCTTCACGAATGCCCGCGCAT ATCTCGGCGCGGCCCGGCTCGGCGAGTTCGACTGCCGCCCGCTCGCTCACGCGCTGCGGGCGAGCTGCCCGGCGCTCGCG CACATCGTCGTCGCGGGCGACGATCATGCCTTCTTGCATTTCGATTCGCTGTACGACACGCCGCCCGTCGCCGACTGCGC GGCGCGCGCGGACGACATCGCGTGCTTCCAGCTCTCGGGCGGCACGACGGGCACGCCGAAACTGATTCCGCGCCGCCATC GCGAGTACCTGTACAACGTGCGCGCGTGCTCGGACGCGAGCGGCTTCGGCGCCGACACCGTCTATCTGGCCGCGCTGCCG ATGGCGCACAACTTCACGCTGTGCTGCCCCGGCGTGATCGGCGCGCTGCTCGCGGGCGGCCGCGTCGTCGCGACCGAGCA CCCCGAGCCGGAGTGCGGCTTTGCGCTGATCGCGCGCGAGCGGGTCACGCATACGGCGCTCGTCCCGCCGCTCGCGCTAC TGTGGCTGGACGCGCAGCGCGAGCGCCGAGCGGACCTGTCGAGCCTGCGCGTGCTGCAGGTCGGCGGCGCGCGGCTGATG GACCACGCGGCCGAACGCGTGACGCCCGTCCTCGGCTGCCGGCTGCAACAGGTATTCGGAATGGCCGAAGGCCTCATCTG CTGCACGCGGCTCGACGATCCGCCCGCGCGCATCGCGCGTACGCAGGGCCGGCCGGTGTCGCCCGCCGACGAAGTGCGCA TCGTCGACGAGGCGGGCCGCGCCGTCGCGCCTGGCGAGATCGGCGAATTGCAGGTGCGCGGGCCCTATACGATCCGCGGC TACTACCGGCTCGCCGAGCATCATGCGGCCGCGTTCACGGCCGACGGCTTCTATCGCACCGGCGACCGCGTGCGCCGCAC CGAAGAAGGCGACCTCGTCGTCGAGGGCCGCGACAAGGACCAGATCAATCGCGGCGGCGAAAAAGTATCCGCCGAGGAAG TCGAGAACCTGCTGCTCGCGCATTCGCAAATCCGCGACGCGGCGCTCGTCGCGATGTCCGATCCGCTGCTCGGCGAGCGC ACGTGCGCGTTCGTCGTCGCGCGCCCGCCCGCGCCGACCTCGCTCGCGCTGAAACGGCATTTGCGCGACCACGGGCTCGC CGCGTTCAAGATTCCCGATCGCATCGAATTCGTGCCGAGCTTTCCGGAAACCGGCATCGGCAAGACCAGCAAGAAATCGC TGCGCGACCTGCTGCGCCGCCGGCTCGAAGCGGCGCGCGCATGA
Upstream 100 bases:
>100_bases CGATTCGCCGGCCGCGTCTCCCACGGATTCGCCCGCCTGCGCCCCCAACGTTTCTCCGAACGTTTCCCCAAACGTTTCTC CCGCCGGCTCGCCGTCGCCG
Downstream 100 bases:
>100_bases AGCCGCCGCCTCCGCACGCCGGCTGGGTTCGCGAACTCAGGCTGTCGCCCTGCCCGCGCGCGCAGCTCGTCTGCATGCCG CACGCGGGCGGCGCCGCAAG
Product: 2,3-dihydroxybenzoate-AMP ligase
Products: (2,3-Dihydroxybenzoyl)adenylate; Diphosphate [C]
Alternate protein names: Dihydroxybenzoic acid-activating enzyme [H]
Number of amino acids: Translated: 547; Mature: 546
Protein sequence:
>547_residues MPAAARNAASSDAPDWPDDFARRYRDAGYWRDETFYGALAERARRSPTATAVVDGERRVSYRALLERIRRLAGGLRRLGL ARGDTAVVHLPNGVRFIEACFALFQLGVRPVLALPAHRQHEIGAFCRFTNARAYLGAARLGEFDCRPLAHALRASCPALA HIVVAGDDHAFLHFDSLYDTPPVADCAARADDIACFQLSGGTTGTPKLIPRRHREYLYNVRACSDASGFGADTVYLAALP MAHNFTLCCPGVIGALLAGGRVVATEHPEPECGFALIARERVTHTALVPPLALLWLDAQRERRADLSSLRVLQVGGARLM DHAAERVTPVLGCRLQQVFGMAEGLICCTRLDDPPARIARTQGRPVSPADEVRIVDEAGRAVAPGEIGELQVRGPYTIRG YYRLAEHHAAAFTADGFYRTGDRVRRTEEGDLVVEGRDKDQINRGGEKVSAEEVENLLLAHSQIRDAALVAMSDPLLGER TCAFVVARPPAPTSLALKRHLRDHGLAAFKIPDRIEFVPSFPETGIGKTSKKSLRDLLRRRLEAARA
Sequences:
>Translated_547_residues MPAAARNAASSDAPDWPDDFARRYRDAGYWRDETFYGALAERARRSPTATAVVDGERRVSYRALLERIRRLAGGLRRLGL ARGDTAVVHLPNGVRFIEACFALFQLGVRPVLALPAHRQHEIGAFCRFTNARAYLGAARLGEFDCRPLAHALRASCPALA HIVVAGDDHAFLHFDSLYDTPPVADCAARADDIACFQLSGGTTGTPKLIPRRHREYLYNVRACSDASGFGADTVYLAALP MAHNFTLCCPGVIGALLAGGRVVATEHPEPECGFALIARERVTHTALVPPLALLWLDAQRERRADLSSLRVLQVGGARLM DHAAERVTPVLGCRLQQVFGMAEGLICCTRLDDPPARIARTQGRPVSPADEVRIVDEAGRAVAPGEIGELQVRGPYTIRG YYRLAEHHAAAFTADGFYRTGDRVRRTEEGDLVVEGRDKDQINRGGEKVSAEEVENLLLAHSQIRDAALVAMSDPLLGER TCAFVVARPPAPTSLALKRHLRDHGLAAFKIPDRIEFVPSFPETGIGKTSKKSLRDLLRRRLEAARA >Mature_546_residues PAAARNAASSDAPDWPDDFARRYRDAGYWRDETFYGALAERARRSPTATAVVDGERRVSYRALLERIRRLAGGLRRLGLA RGDTAVVHLPNGVRFIEACFALFQLGVRPVLALPAHRQHEIGAFCRFTNARAYLGAARLGEFDCRPLAHALRASCPALAH IVVAGDDHAFLHFDSLYDTPPVADCAARADDIACFQLSGGTTGTPKLIPRRHREYLYNVRACSDASGFGADTVYLAALPM AHNFTLCCPGVIGALLAGGRVVATEHPEPECGFALIARERVTHTALVPPLALLWLDAQRERRADLSSLRVLQVGGARLMD HAAERVTPVLGCRLQQVFGMAEGLICCTRLDDPPARIARTQGRPVSPADEVRIVDEAGRAVAPGEIGELQVRGPYTIRGY YRLAEHHAAAFTADGFYRTGDRVRRTEEGDLVVEGRDKDQINRGGEKVSAEEVENLLLAHSQIRDAALVAMSDPLLGERT CAFVVARPPAPTSLALKRHLRDHGLAAFKIPDRIEFVPSFPETGIGKTSKKSLRDLLRRRLEAARA
Specific function: Activation of the carboxylate group of 2,3-dihydroxy- benzoate (DHB), via ATP-dependent PPi exchange reactions, to the acyladenylate [H]
COG id: COG1021
COG function: function code Q; Peptide arylation enzymes
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family [H]
Homologues:
Organism=Homo sapiens, GI38505220, Length=530, Percent_Identity=25.4716981132075, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI156151445, Length=563, Percent_Identity=23.0905861456483, Blast_Score=122, Evalue=6e-28, Organism=Homo sapiens, GI115511026, Length=570, Percent_Identity=24.7368421052632, Blast_Score=119, Evalue=7e-27, Organism=Homo sapiens, GI187761345, Length=537, Percent_Identity=27.3743016759777, Blast_Score=115, Evalue=1e-25, Organism=Homo sapiens, GI187761343, Length=537, Percent_Identity=27.3743016759777, Blast_Score=115, Evalue=1e-25, Organism=Homo sapiens, GI122937307, Length=513, Percent_Identity=25.3411306042885, Blast_Score=107, Evalue=3e-23, Organism=Homo sapiens, GI28416953, Length=561, Percent_Identity=24.5989304812834, Blast_Score=107, Evalue=4e-23, Organism=Homo sapiens, GI157311624, Length=539, Percent_Identity=23.3766233766234, Blast_Score=103, Evalue=3e-22, Organism=Homo sapiens, GI157311622, Length=539, Percent_Identity=23.3766233766234, Blast_Score=103, Evalue=3e-22, Organism=Homo sapiens, GI58082049, Length=541, Percent_Identity=22.735674676525, Blast_Score=99, Evalue=8e-21, Organism=Homo sapiens, GI42544132, Length=547, Percent_Identity=22.1206581352834, Blast_Score=99, Evalue=1e-20, Organism=Homo sapiens, GI8923896, Length=546, Percent_Identity=22.1611721611722, Blast_Score=70, Evalue=7e-12, Organism=Escherichia coli, GI1786810, Length=534, Percent_Identity=45.3183520599251, Blast_Score=447, Evalue=1e-127, Organism=Escherichia coli, GI145693145, Length=531, Percent_Identity=30.6967984934087, Blast_Score=206, Evalue=4e-54, Organism=Escherichia coli, GI1788107, Length=552, Percent_Identity=24.8188405797101, Blast_Score=139, Evalue=4e-34, Organism=Escherichia coli, GI221142682, Length=505, Percent_Identity=27.3267326732673, Blast_Score=129, Evalue=4e-31, Organism=Escherichia coli, GI1789201, Length=369, Percent_Identity=26.0162601626016, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1786529, Length=576, Percent_Identity=23.6111111111111, Blast_Score=89, Evalue=1e-18, Organism=Escherichia coli, GI1788595, Length=496, Percent_Identity=24.7983870967742, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1790505, Length=525, Percent_Identity=22.4761904761905, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1786801, Length=463, Percent_Identity=23.110151187905, Blast_Score=72, Evalue=7e-14, Organism=Caenorhabditis elegans, GI17560308, Length=555, Percent_Identity=27.2072072072072, Blast_Score=142, Evalue=7e-34, Organism=Caenorhabditis elegans, GI17531443, Length=371, Percent_Identity=29.3800539083558, Blast_Score=124, Evalue=9e-29, Organism=Caenorhabditis elegans, GI17538037, Length=542, Percent_Identity=25.6457564575646, Blast_Score=115, Evalue=5e-26, Organism=Caenorhabditis elegans, GI17557194, Length=523, Percent_Identity=25.8126195028681, Blast_Score=115, Evalue=8e-26, Organism=Caenorhabditis elegans, GI71994690, Length=377, Percent_Identity=28.1167108753316, Blast_Score=110, Evalue=2e-24, Organism=Caenorhabditis elegans, GI71994703, Length=377, Percent_Identity=28.1167108753316, Blast_Score=110, Evalue=2e-24, Organism=Caenorhabditis elegans, GI71994694, Length=377, Percent_Identity=28.1167108753316, Blast_Score=110, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17559526, Length=367, Percent_Identity=26.4305177111717, Blast_Score=102, Evalue=6e-22, Organism=Caenorhabditis elegans, GI32563687, Length=506, Percent_Identity=22.5296442687747, Blast_Score=97, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17558820, Length=350, Percent_Identity=25.7142857142857, Blast_Score=94, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17507435, Length=530, Percent_Identity=24.7169811320755, Blast_Score=87, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17560140, Length=311, Percent_Identity=26.6881028938907, Blast_Score=84, Evalue=2e-16, Organism=Caenorhabditis elegans, GI71985884, Length=358, Percent_Identity=26.536312849162, Blast_Score=81, Evalue=2e-15, Organism=Caenorhabditis elegans, GI71983001, Length=543, Percent_Identity=23.7569060773481, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71982997, Length=543, Percent_Identity=23.7569060773481, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17556356, Length=356, Percent_Identity=24.438202247191, Blast_Score=70, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6319699, Length=524, Percent_Identity=23.2824427480916, Blast_Score=130, Evalue=7e-31, Organism=Drosophila melanogaster, GI24581924, Length=532, Percent_Identity=25.9398496240602, Blast_Score=142, Evalue=4e-34, Organism=Drosophila melanogaster, GI21355181, Length=508, Percent_Identity=23.8188976377953, Blast_Score=114, Evalue=2e-25, Organism=Drosophila melanogaster, GI19922652, Length=495, Percent_Identity=24.6464646464646, Blast_Score=102, Evalue=5e-22, Organism=Drosophila melanogaster, GI18859661, Length=525, Percent_Identity=24, Blast_Score=100, Evalue=3e-21, Organism=Drosophila melanogaster, GI24656500, Length=500, Percent_Identity=24.6, Blast_Score=97, Evalue=4e-20, Organism=Drosophila melanogaster, GI24667955, Length=548, Percent_Identity=22.8102189781022, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI62472339, Length=548, Percent_Identity=22.8102189781022, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI24648260, Length=360, Percent_Identity=23.0555555555556, Blast_Score=82, Evalue=1e-15, Organism=Drosophila melanogaster, GI21356947, Length=351, Percent_Identity=23.0769230769231, Blast_Score=77, Evalue=4e-14, Organism=Drosophila melanogaster, GI24653035, Length=360, Percent_Identity=22.5, Blast_Score=75, Evalue=2e-13, Organism=Drosophila melanogaster, GI24667959, Length=432, Percent_Identity=23.3796296296296, Blast_Score=73, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020845 - InterPro: IPR000873 - InterPro: IPR011963 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: 2.7.7.58; 2.3.1.- [C]
Molecular weight: Translated: 59787; Mature: 59656
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAAARNAASSDAPDWPDDFARRYRDAGYWRDETFYGALAERARRSPTATAVVDGERRVS CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEECCCHHHH YRALLERIRRLAGGLRRLGLARGDTAVVHLPNGVRFIEACFALFQLGVRPVLALPAHRQH HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEECCCCCCC EIGAFCRFTNARAYLGAARLGEFDCRPLAHALRASCPALAHIVVAGDDHAFLHFDSLYDT CHHHHEEECCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCCCC PPVADCAARADDIACFQLSGGTTGTPKLIPRRHREYLYNVRACSDASGFGADTVYLAALP CCHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEC MAHNFTLCCPGVIGALLAGGRVVATEHPEPECGFALIARERVTHTALVPPLALLWLDAQR CCCCCEEECHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHH ERRADLSSLRVLQVGGARLMDHAAERVTPVLGCRLQQVFGMAEGLICCTRLDDPPARIAR HHHCCHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCHHCCCEEEECCCCCHHHHHH TQGRPVSPADEVRIVDEAGRAVAPGEIGELQVRGPYTIRGYYRLAEHHAAAFTADGFYRT CCCCCCCCHHHEEEHHHCCCEECCCCCCEEEECCCEEEHHHHHHHHHHHHEEECCCCCCC GDRVRRTEEGDLVVEGRDKDQINRGGEKVSAEEVENLLLAHSQIRDAALVAMSDPLLGER CHHHHCCCCCCEEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCC TCAFVVARPPAPTSLALKRHLRDHGLAAFKIPDRIEFVPSFPETGIGKTSKKSLRDLLRR EEEEEEECCCCCHHHHHHHHHHHCCEEEEECCCHHCCCCCCCCCCCCCCHHHHHHHHHHH RLEAARA HHHHHCC >Mature Secondary Structure PAAARNAASSDAPDWPDDFARRYRDAGYWRDETFYGALAERARRSPTATAVVDGERRVS CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEECCCHHHH YRALLERIRRLAGGLRRLGLARGDTAVVHLPNGVRFIEACFALFQLGVRPVLALPAHRQH HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEECCCCCCC EIGAFCRFTNARAYLGAARLGEFDCRPLAHALRASCPALAHIVVAGDDHAFLHFDSLYDT CHHHHEEECCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCCCC PPVADCAARADDIACFQLSGGTTGTPKLIPRRHREYLYNVRACSDASGFGADTVYLAALP CCHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEC MAHNFTLCCPGVIGALLAGGRVVATEHPEPECGFALIARERVTHTALVPPLALLWLDAQR CCCCCEEECHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHH ERRADLSSLRVLQVGGARLMDHAAERVTPVLGCRLQQVFGMAEGLICCTRLDDPPARIAR HHHCCHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCHHCCCEEEECCCCCHHHHHH TQGRPVSPADEVRIVDEAGRAVAPGEIGELQVRGPYTIRGYYRLAEHHAAAFTADGFYRT CCCCCCCCHHHEEEHHHCCCEECCCCCCEEEECCCEEEHHHHHHHHHHHHEEECCCCCCC GDRVRRTEEGDLVVEGRDKDQINRGGEKVSAEEVENLLLAHSQIRDAALVAMSDPLLGER CHHHHCCCCCCEEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCC TCAFVVARPPAPTSLALKRHLRDHGLAAFKIPDRIEFVPSFPETGIGKTSKKSLRDLLRR EEEEEEECCCCCHHHHHHHHHHHCCEEEEECCCHHCCCCCCCCCCCCCCHHHHHHHHHHH RLEAARA HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2,3-Dihydroxybenzoate; ATP [C]
Specific reaction: 2,3-Dihydroxybenzoate + ATP <==> (2,3-Dihydroxybenzoyl)adenylate + Diphosphate [C]
General reaction: Ligases; Forming Carbon-Sulfur Bonds; Acid-Thiol Ligases [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8921902; 9384377; 8224884; 12221282 [H]