| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
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The map label for this gene is argM [C]
Identifier: 126444673
GI number: 126444673
Start: 693048
End: 694466
Strand: Reverse
Name: argM [C]
Synonym: BURPS668_A0727
Alternate gene names: 126444673
Gene position: 694466-693048 (Counterclockwise)
Preceding gene: 126443713
Following gene: 126445558
Centisome position: 22.21
GC content: 67.3
Gene sequence:
>1419_bases ATGAGCTACCGACCGAACAACGAATCCGCATGGATTCAACCCGCCGCGCCCGCGCACCGCACGAGCGCCGAATACCGCGC GCTCGACGCCGCGCACCACCTCCACCCGTTCTCGGACATGGGCTCGCTCAATCGCGCGGGCAGCCGCGTGATCGTGAAGG CCGAAGGCGTCCACCTGTGGGATTCCGACGGCAACAGGATCATCGACGGCATGGCCGGGCTCTGGTGCGTGAACGTCGGC TACGGCCGCGACGAGCTGATCGAGGCCGGCAGCCGCCAGTTGCGCGAGCTGCCGTTCTACAACACCTTCTTCAAGACCAC CCATCCGCCCGTCATCGAGCTGTCCGCGCTGCTCGCGCAGATCGCGCCGCCCGCGTTCAACCGCTTCTTCTATTGCAACA GCGGCTCCGAGGGCAACGACACGGTGCTGCGCATCGCGCATCAGTACTGGCGCGCGCAGAACCGCCCGCAGAAGAAGTTC GTCATTTCGCGCCGAAACGGCTACCACGGCTCGACGATCGCGGGCGCGACGCTCGGCGGCATGCGCTACATGCACGAGCA GATGCCCTCGAAGGTCGAGCACATCGTCCACATCGATCAGCCCTATTACTTCGGCGAAGCGCGCGAGGGGCAGACGCCCG AGGCGTTCGGCCTCGAGCGCGCGCGACAGCTCGAAGCGAAGATTCTCGAGCTCGGCGCGCAGAACGTCGCGGCGTTCATC GGCGAGCCGTTCCAGGGCGCGGGCGGCGTGATCTTTCCGCCGTCGACGTACTGGCCGGAGATCGAGCGGATCTGCCGCCA GTACGACGTGCTGCTCGTCGCCGACGAAGTGATCGGCGGCTTCGGGCGCACCGGCGAATGGTTCGCGCACCAGCACTTCG GCTTCGCGCCCGACCTGATGACGCTCGCCAAGGGCCTGACGAGCGGTTACGTGCCGATGGGCGCGGTCGCGCTGTCGGAC CGGATCGCCGACGCGCTGATCGCGCACGGCGAGTTCAACCACGGGATGACGTACTCCGGGCATCCGGTCGCGGCGGCGGT GGCCGTCGCGAATCTGAAGGTGCTGCGCGACGAGCGGATCGTCGAGCGCGTGAAGACCGATACCGGCCCCTACTTCCAGC AGCGGTTGCGCGAAACGTTCGCGAACCATCCGATCGTCGGCGACATCGCCGGCGCGGGGCTCGTCGCCGGCATCCAGCTC GCGCGCGAGCCGCGCACGCGCAAGCGCTTCGAGAACGGCGGCGAAGTCGGCACGATCTGCCGCGACTACTGCTTCAACGG CAACCTGATCATGCGCGCGACGGGCGACCGGATGCTGCTGTCGCCGCCGCTCGTGATCTCGAAACCGCAGATCGACGAGA TCGTCGAGAAGGCGAAGCGTGCGATCGATGCGACGGCGCAGCAACTGGGTCTTTCCTAA
Upstream 100 bases:
>100_bases AATACGAAGCGTTCTTCCGCGTGATCAGCTCGTGGGAACGCAAGCATCTGCTGCTGCACGTCTGAACGCGCATGCAGCCG CATCCATCCAGGAGGACACG
Downstream 100 bases:
>100_bases CGGCATTGCCAATCGGGCAGGCGGCGCGCGGGCGCCGCGCGCCCACCTTCATCATCAGGGGAACAACATGAGTGTGAGCC ATCTTCGTCATGCGGTCGCG
Product: putative aminotransferase
Products: L-glutamate; N2-succinylglutamic-semialdehyde [C]
Alternate protein names: NA
Number of amino acids: Translated: 472; Mature: 471
Protein sequence:
>472_residues MSYRPNNESAWIQPAAPAHRTSAEYRALDAAHHLHPFSDMGSLNRAGSRVIVKAEGVHLWDSDGNRIIDGMAGLWCVNVG YGRDELIEAGSRQLRELPFYNTFFKTTHPPVIELSALLAQIAPPAFNRFFYCNSGSEGNDTVLRIAHQYWRAQNRPQKKF VISRRNGYHGSTIAGATLGGMRYMHEQMPSKVEHIVHIDQPYYFGEAREGQTPEAFGLERARQLEAKILELGAQNVAAFI GEPFQGAGGVIFPPSTYWPEIERICRQYDVLLVADEVIGGFGRTGEWFAHQHFGFAPDLMTLAKGLTSGYVPMGAVALSD RIADALIAHGEFNHGMTYSGHPVAAAVAVANLKVLRDERIVERVKTDTGPYFQQRLRETFANHPIVGDIAGAGLVAGIQL AREPRTRKRFENGGEVGTICRDYCFNGNLIMRATGDRMLLSPPLVISKPQIDEIVEKAKRAIDATAQQLGLS
Sequences:
>Translated_472_residues MSYRPNNESAWIQPAAPAHRTSAEYRALDAAHHLHPFSDMGSLNRAGSRVIVKAEGVHLWDSDGNRIIDGMAGLWCVNVG YGRDELIEAGSRQLRELPFYNTFFKTTHPPVIELSALLAQIAPPAFNRFFYCNSGSEGNDTVLRIAHQYWRAQNRPQKKF VISRRNGYHGSTIAGATLGGMRYMHEQMPSKVEHIVHIDQPYYFGEAREGQTPEAFGLERARQLEAKILELGAQNVAAFI GEPFQGAGGVIFPPSTYWPEIERICRQYDVLLVADEVIGGFGRTGEWFAHQHFGFAPDLMTLAKGLTSGYVPMGAVALSD RIADALIAHGEFNHGMTYSGHPVAAAVAVANLKVLRDERIVERVKTDTGPYFQQRLRETFANHPIVGDIAGAGLVAGIQL AREPRTRKRFENGGEVGTICRDYCFNGNLIMRATGDRMLLSPPLVISKPQIDEIVEKAKRAIDATAQQLGLS >Mature_471_residues SYRPNNESAWIQPAAPAHRTSAEYRALDAAHHLHPFSDMGSLNRAGSRVIVKAEGVHLWDSDGNRIIDGMAGLWCVNVGY GRDELIEAGSRQLRELPFYNTFFKTTHPPVIELSALLAQIAPPAFNRFFYCNSGSEGNDTVLRIAHQYWRAQNRPQKKFV ISRRNGYHGSTIAGATLGGMRYMHEQMPSKVEHIVHIDQPYYFGEAREGQTPEAFGLERARQLEAKILELGAQNVAAFIG EPFQGAGGVIFPPSTYWPEIERICRQYDVLLVADEVIGGFGRTGEWFAHQHFGFAPDLMTLAKGLTSGYVPMGAVALSDR IADALIAHGEFNHGMTYSGHPVAAAVAVANLKVLRDERIVERVKTDTGPYFQQRLRETFANHPIVGDIAGAGLVAGIQLA REPRTRKRFENGGEVGTICRDYCFNGNLIMRATGDRMLLSPPLVISKPQIDEIVEKAKRAIDATAQQLGLS
Specific function: Catalyzes The Transmination Of N(2)-Succinylornithine And Alpha-Ketoglutarate Into N(2)-Succinylglutamate Semialdehyde And Glutamate. Can Also Act As A Acetylornithine Aminotransferase. [C]
COG id: COG0161
COG function: function code H; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI24119277, Length=360, Percent_Identity=29.1666666666667, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI37574042, Length=370, Percent_Identity=29.7297297297297, Blast_Score=146, Evalue=4e-35, Organism=Homo sapiens, GI226442705, Length=367, Percent_Identity=29.9727520435967, Blast_Score=145, Evalue=1e-34, Organism=Homo sapiens, GI13994255, Length=423, Percent_Identity=27.8959810874704, Blast_Score=142, Evalue=9e-34, Organism=Homo sapiens, GI226442709, Length=323, Percent_Identity=30.6501547987616, Blast_Score=137, Evalue=3e-32, Organism=Homo sapiens, GI4557809, Length=444, Percent_Identity=26.3513513513513, Blast_Score=129, Evalue=6e-30, Organism=Homo sapiens, GI284507298, Length=228, Percent_Identity=32.8947368421053, Blast_Score=113, Evalue=4e-25, Organism=Homo sapiens, GI188536080, Length=286, Percent_Identity=26.5734265734266, Blast_Score=84, Evalue=3e-16, Organism=Homo sapiens, GI38679950, Length=286, Percent_Identity=26.5734265734266, Blast_Score=84, Evalue=3e-16, Organism=Homo sapiens, GI38679946, Length=286, Percent_Identity=26.5734265734266, Blast_Score=84, Evalue=3e-16, Organism=Escherichia coli, GI1788044, Length=415, Percent_Identity=26.9879518072289, Blast_Score=157, Evalue=1e-39, Organism=Escherichia coli, GI1786991, Length=447, Percent_Identity=28.8590604026846, Blast_Score=155, Evalue=4e-39, Organism=Escherichia coli, GI1789759, Length=415, Percent_Identity=27.710843373494, Blast_Score=155, Evalue=6e-39, Organism=Escherichia coli, GI145693181, Length=411, Percent_Identity=25.7907542579075, Blast_Score=147, Evalue=2e-36, Organism=Escherichia coli, GI1789016, Length=421, Percent_Identity=26.3657957244656, Blast_Score=129, Evalue=4e-31, Organism=Escherichia coli, GI1787560, Length=370, Percent_Identity=29.7297297297297, Blast_Score=117, Evalue=1e-27, Organism=Escherichia coli, GI1786349, Length=310, Percent_Identity=25.4838709677419, Blast_Score=78, Evalue=1e-15, Organism=Caenorhabditis elegans, GI71992977, Length=427, Percent_Identity=28.3372365339578, Blast_Score=155, Evalue=3e-38, Organism=Caenorhabditis elegans, GI25144271, Length=423, Percent_Identity=27.4231678486998, Blast_Score=152, Evalue=4e-37, Organism=Caenorhabditis elegans, GI32564660, Length=450, Percent_Identity=29.3333333333333, Blast_Score=145, Evalue=5e-35, Organism=Caenorhabditis elegans, GI25144274, Length=235, Percent_Identity=33.1914893617021, Blast_Score=134, Evalue=1e-31, Organism=Saccharomyces cerevisiae, GI6323470, Length=460, Percent_Identity=26.5217391304348, Blast_Score=167, Evalue=4e-42, Organism=Saccharomyces cerevisiae, GI6324386, Length=366, Percent_Identity=30.6010928961749, Blast_Score=139, Evalue=7e-34, Organism=Saccharomyces cerevisiae, GI6324432, Length=433, Percent_Identity=25.4041570438799, Blast_Score=130, Evalue=7e-31, Organism=Saccharomyces cerevisiae, GI6321456, Length=364, Percent_Identity=23.3516483516484, Blast_Score=78, Evalue=2e-15, Organism=Drosophila melanogaster, GI161085790, Length=426, Percent_Identity=28.8732394366197, Blast_Score=152, Evalue=3e-37, Organism=Drosophila melanogaster, GI28574759, Length=430, Percent_Identity=29.3023255813954, Blast_Score=152, Evalue=4e-37, Organism=Drosophila melanogaster, GI21356575, Length=371, Percent_Identity=29.9191374663073, Blast_Score=146, Evalue=4e-35, Organism=Drosophila melanogaster, GI21357415, Length=475, Percent_Identity=26.7368421052632, Blast_Score=146, Evalue=4e-35, Organism=Drosophila melanogaster, GI281366494, Length=342, Percent_Identity=23.6842105263158, Blast_Score=73, Evalue=4e-13, Organism=Drosophila melanogaster, GI24667139, Length=342, Percent_Identity=23.6842105263158, Blast_Score=73, Evalue=4e-13, Organism=Drosophila melanogaster, GI24667143, Length=342, Percent_Identity=23.6842105263158, Blast_Score=73, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005814 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00202 Aminotran_3 [H]
EC number: 2.6.1.- [C]
Molecular weight: Translated: 52183; Mature: 52052
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: PS00600 AA_TRANSFER_CLASS_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYRPNNESAWIQPAAPAHRTSAEYRALDAAHHLHPFSDMGSLNRAGSRVIVKAEGVHLW CCCCCCCCCCEEECCCCCHHCCHHHHHHHHHHHCCCCHHHCCHHCCCCEEEEEECCEEEE DSDGNRIIDGMAGLWCVNVGYGRDELIEAGSRQLRELPFYNTFFKTTHPPVIELSALLAQ CCCCCEEHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHH IAPPAFNRFFYCNSGSEGNDTVLRIAHQYWRAQNRPQKKFVISRRNGYHGSTIAGATLGG HCCCHHCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHEEEECCCCCCCCCCCHHHHHH MRYMHEQMPSKVEHIVHIDQPYYFGEAREGQTPEAFGLERARQLEAKILELGAQNVAAFI HHHHHHHHHHHHHHHEECCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GEPFQGAGGVIFPPSTYWPEIERICRQYDVLLVADEVIGGFGRTGEWFAHQHFGFAPDLM CCCCCCCCCEEECCCCCCHHHHHHHHHHCEEEEEHHHHCCCCCCCHHHHHHCCCCCHHHH TLAKGLTSGYVPMGAVALSDRIADALIAHGEFNHGMTYSGHPVAAAVAVANLKVLRDERI HHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH VERVKTDTGPYFQQRLRETFANHPIVGDIAGAGLVAGIQLAREPRTRKRFENGGEVGTIC HHHHHCCCCHHHHHHHHHHHCCCCCEEHHHCCHHHHHHHHHCCCHHHHHHHCCCCHHHHH RDYCFNGNLIMRATGDRMLLSPPLVISKPQIDEIVEKAKRAIDATAQQLGLS HHHHCCCCEEEEECCCEEEECCCCEECCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SYRPNNESAWIQPAAPAHRTSAEYRALDAAHHLHPFSDMGSLNRAGSRVIVKAEGVHLW CCCCCCCCCEEECCCCCHHCCHHHHHHHHHHHCCCCHHHCCHHCCCCEEEEEECCEEEE DSDGNRIIDGMAGLWCVNVGYGRDELIEAGSRQLRELPFYNTFFKTTHPPVIELSALLAQ CCCCCEEHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHH IAPPAFNRFFYCNSGSEGNDTVLRIAHQYWRAQNRPQKKFVISRRNGYHGSTIAGATLGG HCCCHHCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHEEEECCCCCCCCCCCHHHHHH MRYMHEQMPSKVEHIVHIDQPYYFGEAREGQTPEAFGLERARQLEAKILELGAQNVAAFI HHHHHHHHHHHHHHHEECCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GEPFQGAGGVIFPPSTYWPEIERICRQYDVLLVADEVIGGFGRTGEWFAHQHFGFAPDLM CCCCCCCCCEEECCCCCCHHHHHHHHHHCEEEEEHHHHCCCCCCCHHHHHHCCCCCHHHH TLAKGLTSGYVPMGAVALSDRIADALIAHGEFNHGMTYSGHPVAAAVAVANLKVLRDERI HHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH VERVKTDTGPYFQQRLRETFANHPIVGDIAGAGLVAGIQLAREPRTRKRFENGGEVGTIC HHHHHCCCCHHHHHHHHHHHCCCCCEEHHHCCHHHHHHHHHCCCHHHHHHHCCCCHHHHH RDYCFNGNLIMRATGDRMLLSPPLVISKPQIDEIVEKAKRAIDATAQQLGLS HHHHCCCCEEEEECCCEEEECCCCEECCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: Pyridoxal Phosphate. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: N-alpha-acetylornithine; 2-oxoglutarate [C]
Specific reaction: N-alpha-acetylornithine + 2-oxoglutarate = N-acetylglutamate semialdehyde + L-glutamate N2-succinylornithine + 2-oxoglutarate = N2-succinylglutamic-semialdehyde + L-glutamate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8796346; 9163424 [H]