| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
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The map label for this gene is 126444629
Identifier: 126444629
GI number: 126444629
Start: 118142
End: 118903
Strand: Reverse
Name: 126444629
Synonym: BURPS668_A0136
Alternate gene names: NA
Gene position: 118903-118142 (Counterclockwise)
Preceding gene: 126443199
Following gene: 126444123
Centisome position: 3.8
GC content: 67.85
Gene sequence:
>762_bases ATGACCGCCCGGCCGCGGACCCGGCGGCACGCGCGCGCACATGCCGATGCCGGCGCCAACGCCAACGCCGATGCCAACGC CGATGCCAACGCCGATACCAACGCCGATGCCAACGCCGACGCCGACGCCAACGTGAACATGAAGGCGGACGCGAGATGCG ATACGCGGAAGCACGCGCAGCGTCATTGCACCCATGCCTTCGTCGCGCACGATCCTCGGCTCATGACGCGGGACGTCGCC GAGAACCGCCGGGTCTGGCTGCTGAAGCGAAATTGCGCGCTGTCGCCGCGCCAATCGCTGATATCGATGGGGCTCCTGGC CGCGCTCACGCTGGCGATCGCGATGCCGTTCGCGATCGCCGGCGCATGGGCGGTGTTTGCCTGCGCGATCGGCGAAATCG CCGCGATGTGCGGTTGCTTCCTGCGCTATGCGCGGCACGCCGTCGATTACGATTGCGTCGCGCTGACCGAGCAGCGCCTC GAAGTCATTCAATGCGACGGCGCGCAGCTTCGGCGGTACGACTGGAACCCGCTATGGGTCGCCGTCGATCTCGATGCCGC GCACGCGCGCGATCCGACGATACGGATACGGCACGGAAGCGAGACCGCGCTCGTCGGCCGTCACGTCACGCTCGCGCGGC GGCGACATGTCGCGAGAGAACTCAACGCGGCGCTGGCGGCGAGCGCCGGCGACTTCGGCGACACGGACTTCGCCCCATCC GTTCGACAACGACAACCTGAACCACTCGCTGCGCATCGATAA
Upstream 100 bases:
>100_bases GCTGCGTCGACGCGAAACCGTGGGACGGCGCGCAGGGGCTCGAATGGACGCTGCCGAGCCCAGCGCCGTACCATTCGTTC GAAACGCCGCCGGCCGTCAA
Downstream 100 bases:
>100_bases CGCGGTGAAATACACGAGCGACCATTACGCGGGCGTCAAATTTGGCGCGCTGTACGGGTTCTCGAACGCGGCGAACTTCG CCGACAACCGCGATCGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Integral Membrane Protein-Like Protein; Transmembrane Protein
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MTARPRTRRHARAHADAGANANADANADANADTNADANADADANVNMKADARCDTRKHAQRHCTHAFVAHDPRLMTRDVA ENRRVWLLKRNCALSPRQSLISMGLLAALTLAIAMPFAIAGAWAVFACAIGEIAAMCGCFLRYARHAVDYDCVALTEQRL EVIQCDGAQLRRYDWNPLWVAVDLDAAHARDPTIRIRHGSETALVGRHVTLARRRHVARELNAALAASAGDFGDTDFAPS VRQRQPEPLAAHR
Sequences:
>Translated_253_residues MTARPRTRRHARAHADAGANANADANADANADTNADANADADANVNMKADARCDTRKHAQRHCTHAFVAHDPRLMTRDVA ENRRVWLLKRNCALSPRQSLISMGLLAALTLAIAMPFAIAGAWAVFACAIGEIAAMCGCFLRYARHAVDYDCVALTEQRL EVIQCDGAQLRRYDWNPLWVAVDLDAAHARDPTIRIRHGSETALVGRHVTLARRRHVARELNAALAASAGDFGDTDFAPS VRQRQPEPLAAHR >Mature_252_residues TARPRTRRHARAHADAGANANADANADANADTNADANADADANVNMKADARCDTRKHAQRHCTHAFVAHDPRLMTRDVAE NRRVWLLKRNCALSPRQSLISMGLLAALTLAIAMPFAIAGAWAVFACAIGEIAAMCGCFLRYARHAVDYDCVALTEQRLE VIQCDGAQLRRYDWNPLWVAVDLDAAHARDPTIRIRHGSETALVGRHVTLARRRHVARELNAALAASAGDFGDTDFAPSV RQRQPEPLAAHR
Specific function: Unknown
COG id: COG5488
COG function: function code S; Integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27697; Mature: 27565
Theoretical pI: Translated: 8.60; Mature: 8.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTARPRTRRHARAHADAGANANADANADANADTNADANADADANVNMKADARCDTRKHAQ CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH RHCTHAFVAHDPRLMTRDVAENRRVWLLKRNCALSPRQSLISMGLLAALTLAIAMPFAIA HHHHHHHHHCCCHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH GAWAVFACAIGEIAAMCGCFLRYARHAVDYDCVALTEQRLEVIQCDGAQLRRYDWNPLWV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHEECCCCEEEE AVDLDAAHARDPTIRIRHGSETALVGRHVTLARRRHVARELNAALAASAGDFGDTDFAPS EEECCCCCCCCCEEEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC VRQRQPEPLAAHR HHHCCCCCCCCCC >Mature Secondary Structure TARPRTRRHARAHADAGANANADANADANADTNADANADADANVNMKADARCDTRKHAQ CCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH RHCTHAFVAHDPRLMTRDVAENRRVWLLKRNCALSPRQSLISMGLLAALTLAIAMPFAIA HHHHHHHHHCCCHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH GAWAVFACAIGEIAAMCGCFLRYARHAVDYDCVALTEQRLEVIQCDGAQLRRYDWNPLWV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHEECCCCEEEE AVDLDAAHARDPTIRIRHGSETALVGRHVTLARRRHVARELNAALAASAGDFGDTDFAPS EEECCCCCCCCCEEEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC VRQRQPEPLAAHR HHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA