| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
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The map label for this gene is 126443596
Identifier: 126443596
GI number: 126443596
Start: 1044622
End: 1046187
Strand: Reverse
Name: 126443596
Synonym: BURPS668_A1084
Alternate gene names: NA
Gene position: 1046187-1044622 (Counterclockwise)
Preceding gene: 126444315
Following gene: 126444567
Centisome position: 33.45
GC content: 72.16
Gene sequence:
>1566_bases ATGCAGGAGGGCAACATGTCCGACCCGTCACGGGAGAATCCCCCGACCGACGCGCACGCTTCGTCGCTCGTCACGCACGA CGAACCGGTGCCGCGCGGCCGCCGCGCGCCGCGTCCGCTCTGGACGCTCGTGCCGCGCGCCGCCGGCTACGGCGTCGTGT TCTTCGTCATCTGGATGGTGCTGACCATCATGTTTCCGAACGTCTTCACGCGCTCGTCCGAGCGCGCGGTCGTCAACAAC GAAGTGACGCTCGTCACGTCGCCGGTCGAAGGCGTCGTGACCGAGCAGCACGTGACGGCCGGCAAGCCGTTCGACGCGAA CCAGCCGCTCGCGACCGTGCAGAACCCGAACGTCGATCGCGCGCTGCTGATCGACCTGACGGGCAAGAAGCTCGACAACC AGCAGCGCGAGGACGCGGCGCGCGCCGAGCTCGCGGGCGACGAGAGCCAGCTCGCGTCGACCGAGCACGATCTGCAGCGC TATCAGTCCGTGGCACAGAAGGAGCACGCGGCGACCATCCGCGCGCTCGAGGCGCGGCTCGCGGTCGCGCGCGCGCAGGT GGACCAGCAGGAAGACATCGTCAACCGCAATCAGGCGATGCAGTGGGCAGGCGCCGTGAGCGAGGCGTACACCAGCGCGT CGCGCTATCAGCTATCGATCCTGTCGAACGCGAAAGCGGCCGCGGCCGCCGAGCTCGAGCACGCGGTCGCGAACGGCGAC GCGTCGCGCAGCAAGGTCTACGCGTCCGCCACCGACGGGCCGGCCGCGTCGCTGTCGCAGCGCGGCCGGCTGCTCGGCGC GGACATCGCGCAGCGCAAGGCCGAGATCGCGCAGTTCGACGCTTACGGCCAGTCGGTCGACAAGCTGATCGCCGCCGAGC AGCAGCGGCTCGACAGGCTGAGCCGCATCGAGATCCGCTCGGGCGAGCCGGGCGTCGCGGAGGACGTGCTCGCCCCGCCC GGCACGCGCGTCGCCGCCGGCGCGACGCTGATCCGTGCGAGCAACTGCGCGCGCTCGCGTGTGGTCGCCGTGTTCCCGCG CAGCCTGAGCGACGACCTGCTGCCCGGCACGCATCTGAACGTGCGGATGGACGGTGTGCCGGCCGTGCTGCCCGCGTCGA TCGCCGAAGTGCTGCCGCGCGCGTCCGAAGGCGAGCAGGCGCGCTACTTCGTGCCCTTCCCGCCGATCGAAAAGAACGAG ATCTATGTGATCGCGAAGCTCGACGAGCCGCTCGCGCCGCTGTCGCGCCGCGCGAGCGCCCGGCCGGACGCGCGCTGCGC GATGGGGCGCTGGGCGAGAGTCAGCCTCGATCGGGGCTGGCTCGCGAGCAACGTGTCCGGTCTCGCGAACGTCGATCCGA ACTGGACCGCCGGCGCGCGTTCGGCGCTCGCGCGCGGCGGGCAATGGCTGCGCGACGCCGGCGTGCAAGCCCGGCGCCGG CTCGAGGACTTCGCGACGAACGCCGCGCGCCGGCTCGGCGAGCGGGCCGCGGACGGGCGGCGCTGGCTGAACGAGCGGGC GAGCGCGGCCCGACGCTGGCTCGACGATCTGAAATCGGCGGCCTGA
Upstream 100 bases:
>100_bases GGAGGCCCGCCTGTCGCCGTCGATCCCGTCGACGTCGACGCGCGCGGCACCGGGCCGCGCGTGCGCGCCTGTCTTTTGTC TCATCGTTCGCGCTTTTGCG
Downstream 100 bases:
>100_bases GCGCGCGCAGCCCCATGCCGATGAGATTTCACCTCGTCCGCCGCCTGGGCCGTGCGGCATCGTTCGCGATCGGGCCGATG GCCTCGCTGCTGTTCGTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 521; Mature: 521
Protein sequence:
>521_residues MQEGNMSDPSRENPPTDAHASSLVTHDEPVPRGRRAPRPLWTLVPRAAGYGVVFFVIWMVLTIMFPNVFTRSSERAVVNN EVTLVTSPVEGVVTEQHVTAGKPFDANQPLATVQNPNVDRALLIDLTGKKLDNQQREDAARAELAGDESQLASTEHDLQR YQSVAQKEHAATIRALEARLAVARAQVDQQEDIVNRNQAMQWAGAVSEAYTSASRYQLSILSNAKAAAAAELEHAVANGD ASRSKVYASATDGPAASLSQRGRLLGADIAQRKAEIAQFDAYGQSVDKLIAAEQQRLDRLSRIEIRSGEPGVAEDVLAPP GTRVAAGATLIRASNCARSRVVAVFPRSLSDDLLPGTHLNVRMDGVPAVLPASIAEVLPRASEGEQARYFVPFPPIEKNE IYVIAKLDEPLAPLSRRASARPDARCAMGRWARVSLDRGWLASNVSGLANVDPNWTAGARSALARGGQWLRDAGVQARRR LEDFATNAARRLGERAADGRRWLNERASAARRWLDDLKSAA
Sequences:
>Translated_521_residues MQEGNMSDPSRENPPTDAHASSLVTHDEPVPRGRRAPRPLWTLVPRAAGYGVVFFVIWMVLTIMFPNVFTRSSERAVVNN EVTLVTSPVEGVVTEQHVTAGKPFDANQPLATVQNPNVDRALLIDLTGKKLDNQQREDAARAELAGDESQLASTEHDLQR YQSVAQKEHAATIRALEARLAVARAQVDQQEDIVNRNQAMQWAGAVSEAYTSASRYQLSILSNAKAAAAAELEHAVANGD ASRSKVYASATDGPAASLSQRGRLLGADIAQRKAEIAQFDAYGQSVDKLIAAEQQRLDRLSRIEIRSGEPGVAEDVLAPP GTRVAAGATLIRASNCARSRVVAVFPRSLSDDLLPGTHLNVRMDGVPAVLPASIAEVLPRASEGEQARYFVPFPPIEKNE IYVIAKLDEPLAPLSRRASARPDARCAMGRWARVSLDRGWLASNVSGLANVDPNWTAGARSALARGGQWLRDAGVQARRR LEDFATNAARRLGERAADGRRWLNERASAARRWLDDLKSAA >Mature_521_residues MQEGNMSDPSRENPPTDAHASSLVTHDEPVPRGRRAPRPLWTLVPRAAGYGVVFFVIWMVLTIMFPNVFTRSSERAVVNN EVTLVTSPVEGVVTEQHVTAGKPFDANQPLATVQNPNVDRALLIDLTGKKLDNQQREDAARAELAGDESQLASTEHDLQR YQSVAQKEHAATIRALEARLAVARAQVDQQEDIVNRNQAMQWAGAVSEAYTSASRYQLSILSNAKAAAAAELEHAVANGD ASRSKVYASATDGPAASLSQRGRLLGADIAQRKAEIAQFDAYGQSVDKLIAAEQQRLDRLSRIEIRSGEPGVAEDVLAPP GTRVAAGATLIRASNCARSRVVAVFPRSLSDDLLPGTHLNVRMDGVPAVLPASIAEVLPRASEGEQARYFVPFPPIEKNE IYVIAKLDEPLAPLSRRASARPDARCAMGRWARVSLDRGWLASNVSGLANVDPNWTAGARSALARGGQWLRDAGVQARRR LEDFATNAARRLGERAADGRRWLNERASAARRWLDDLKSAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56521; Mature: 56521
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQEGNMSDPSRENPPTDAHASSLVTHDEPVPRGRRAPRPLWTLVPRAAGYGVVFFVIWMV CCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHH LTIMFPNVFTRSSERAVVNNEVTLVTSPVEGVVTEQHVTAGKPFDANQPLATVQNPNVDR HHHHHHHHHCCCCCCEEECCCEEEEECCCCCHHHHHHHCCCCCCCCCCCCEECCCCCCCE ALLIDLTGKKLDNQQREDAARAELAGDESQLASTEHDLQRYQSVAQKEHAATIRALEARL EEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVARAQVDQQEDIVNRNQAMQWAGAVSEAYTSASRYQLSILSNAKAAAAAELEHAVANGD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHCCC ASRSKVYASATDGPAASLSQRGRLLGADIAQRKAEIAQFDAYGQSVDKLIAAEQQRLDRL CCCCEEEEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRIEIRSGEPGVAEDVLAPPGTRVAAGATLIRASNCARSRVVAVFPRSLSDDLLPGTHLN HHEEECCCCCCCHHHCCCCCCCCHHHCHHHEECCCCHHCCEEEEECCCCCCCCCCCCEEE VRMDGVPAVLPASIAEVLPRASEGEQARYFVPFPPIEKNEIYVIAKLDEPLAPLSRRASA EEECCCCCHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCEEEEEECCCCCHHHHHHCCC RPDARCAMGRWARVSLDRGWLASNVSGLANVDPNWTAGARSALARGGQWLRDAGVQARRR CCCHHHHHCCCEEEECCCCHHHHCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHH LEDFATNAARRLGERAADGRRWLNERASAARRWLDDLKSAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQEGNMSDPSRENPPTDAHASSLVTHDEPVPRGRRAPRPLWTLVPRAAGYGVVFFVIWMV CCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHH LTIMFPNVFTRSSERAVVNNEVTLVTSPVEGVVTEQHVTAGKPFDANQPLATVQNPNVDR HHHHHHHHHCCCCCCEEECCCEEEEECCCCCHHHHHHHCCCCCCCCCCCCEECCCCCCCE ALLIDLTGKKLDNQQREDAARAELAGDESQLASTEHDLQRYQSVAQKEHAATIRALEARL EEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVARAQVDQQEDIVNRNQAMQWAGAVSEAYTSASRYQLSILSNAKAAAAAELEHAVANGD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHCCC ASRSKVYASATDGPAASLSQRGRLLGADIAQRKAEIAQFDAYGQSVDKLIAAEQQRLDRL CCCCEEEEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRIEIRSGEPGVAEDVLAPPGTRVAAGATLIRASNCARSRVVAVFPRSLSDDLLPGTHLN HHEEECCCCCCCHHHCCCCCCCCHHHCHHHEECCCCHHCCEEEEECCCCCCCCCCCCEEE VRMDGVPAVLPASIAEVLPRASEGEQARYFVPFPPIEKNEIYVIAKLDEPLAPLSRRASA EEECCCCCHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCEEEEEECCCCCHHHHHHCCC RPDARCAMGRWARVSLDRGWLASNVSGLANVDPNWTAGARSALARGGQWLRDAGVQARRR CCCHHHHHCCCEEEECCCCHHHHCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHH LEDFATNAARRLGERAADGRRWLNERASAARRWLDDLKSAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA