Definition Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence.
Accession NC_009075
Length 3,127,456

Click here to switch to the map view.

The map label for this gene is bsaU

Identifier: 126444099

GI number: 126444099

Start: 2105704

End: 2107008

Strand: Reverse

Name: bsaU

Synonym: BURPS668_A2169

Alternate gene names: NA

Gene position: 2107008-2105704 (Counterclockwise)

Preceding gene: 126444157

Following gene: 126443367

Centisome position: 67.37

GC content: 77.93

Gene sequence:

>1305_bases
ATGGGTTCAACCATCAGCAATAGCGCGCCGATCGCGCCGATCGTCTCGGGCGTCGAGCCCGCGCAGCAGTCGGACGCGGA
GCGGACGTCCGATCTGCAGCGCGCGTATCGCGAGCAATGCCGCGCGGCGCTCGGCAAGCGCGACGACGGACGCGACTGCG
ACGACACCGAAGCGCAGCGCGCCCACGCGAGGAAAAAGACGAAGCGCAACGGCGAGCCGCCGGGCGCGGCGGGCGGGATG
CCCGCGCCGCATGCGGCGCGGGACCGGGCGTTCGCGTTGCGGTTCGGCGGCGCGCGGCTCGGCGAAGCGCGAAGCGGCGC
GAACGCGCGGGATGCGCGCGTCGGAGCGGGCGCCGAAGCGGGTATCGAAGCGGGTATCGAAGCGGGTATCGAAGCGGGCG
TGGGGGTGGGCACCGACGCGCATGCGGCGGGCGGCGCGTGCACGCGCGGCGAAATCGCGGCGCGCGGCGGCGCGACGATG
CGCGGCCGCGCGCCGGCCTCCGGCGCGGTTCGCGCGACTAGCGAACGCGCACCCGCCGCTGCGACGGCCGACGCGCACGC
GCCGCAGGCGGCGGCCGAGAGCGCGCCGCCGTCCGTGCCGATGCCGGCGGCGCACGCGGCGCCGCGCACGTCGGGCGGCA
GCGCGCGCGATATCGCGGCCGCCGCCGCGCGGATTTGCGCGACGGAGGCGGACCCGGCGGCGGGCGTCGTCGCGTCGCGC
TCGCCGGCGTTGCCCGCCGCGCGCGGGCCGGCCTCGGCGAGGGCCGCCGCATCGGCCGCGTCGGCCATGTCGGCCATGTC
GTCGACACGACGCCCGACGGCCGCCGCTTCGCCGGGCGCTGCGCGCGAACGCGTCGACGGCGACGGCGACGATTCGAACC
GTGCGGGCGACGCGTCGCTCGCCGGCTTGCCGCGCGGCGTTCAACCGCAGGCGTCGCTGCGCGCCGCCGAGCCCGCGGCG
CGCGCGCACGACCCGTCGCGCGCCGCGCGCCAACGCGCGCAGGCCGGCGCGGCGCAGGCGGACGCGCGCGATGTCCGGGA
AACGCAAGGCACCCAGGTGCGCTACAGCTTCAATTCGTGGGACGGGCGGCCCGCGGTCGAGCTGCGCTTCGATGCCGGCG
GCGCGCCGCGCGTCGTCAACGCGCAGCCGAGCCACGACCGCGTGCAGCGCGCGATGGAGCACGGCGCCGATCGGCTGTCG
CCCGGATGGACGGTCGAATTCGATCGGTCGCGCGCGGATGATGACAGCGGCGGCCGCTCGCCGTGGCGGCGCGCGCGGCA
GGAGCCGGAGGCGGATGAGCGATGA

Upstream 100 bases:

>100_bases
CGGCGCAACGCGCATCGCGACTGGCTCGCGCGGCGCAGGATCGAAACCGAGCGGCGGCGCGAATCGGCCGCCGAAGCGGA
CATCACGGAAGGAGCAGGTC

Downstream 100 bases:

>100_bases
GCGCGCGCTATACGTTGTTCAGGCGCGTCGCGCCCGCGGAATTGCCGCTGTACCGCCGTGCGCGGGCGCTGCGCGCGGCG
GGCGAGCACGCCGCGCTGCG

Product: BsaU protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 433

Protein sequence:

>434_residues
MGSTISNSAPIAPIVSGVEPAQQSDAERTSDLQRAYREQCRAALGKRDDGRDCDDTEAQRAHARKKTKRNGEPPGAAGGM
PAPHAARDRAFALRFGGARLGEARSGANARDARVGAGAEAGIEAGIEAGIEAGVGVGTDAHAAGGACTRGEIAARGGATM
RGRAPASGAVRATSERAPAAATADAHAPQAAAESAPPSVPMPAAHAAPRTSGGSARDIAAAAARICATEADPAAGVVASR
SPALPAARGPASARAAASAASAMSAMSSTRRPTAAASPGAARERVDGDGDDSNRAGDASLAGLPRGVQPQASLRAAEPAA
RAHDPSRAARQRAQAGAAQADARDVRETQGTQVRYSFNSWDGRPAVELRFDAGGAPRVVNAQPSHDRVQRAMEHGADRLS
PGWTVEFDRSRADDDSGGRSPWRRARQEPEADER

Sequences:

>Translated_434_residues
MGSTISNSAPIAPIVSGVEPAQQSDAERTSDLQRAYREQCRAALGKRDDGRDCDDTEAQRAHARKKTKRNGEPPGAAGGM
PAPHAARDRAFALRFGGARLGEARSGANARDARVGAGAEAGIEAGIEAGIEAGVGVGTDAHAAGGACTRGEIAARGGATM
RGRAPASGAVRATSERAPAAATADAHAPQAAAESAPPSVPMPAAHAAPRTSGGSARDIAAAAARICATEADPAAGVVASR
SPALPAARGPASARAAASAASAMSAMSSTRRPTAAASPGAARERVDGDGDDSNRAGDASLAGLPRGVQPQASLRAAEPAA
RAHDPSRAARQRAQAGAAQADARDVRETQGTQVRYSFNSWDGRPAVELRFDAGGAPRVVNAQPSHDRVQRAMEHGADRLS
PGWTVEFDRSRADDDSGGRSPWRRARQEPEADER
>Mature_433_residues
GSTISNSAPIAPIVSGVEPAQQSDAERTSDLQRAYREQCRAALGKRDDGRDCDDTEAQRAHARKKTKRNGEPPGAAGGMP
APHAARDRAFALRFGGARLGEARSGANARDARVGAGAEAGIEAGIEAGIEAGVGVGTDAHAAGGACTRGEIAARGGATMR
GRAPASGAVRATSERAPAAATADAHAPQAAAESAPPSVPMPAAHAAPRTSGGSARDIAAAAARICATEADPAAGVVASRS
PALPAARGPASARAAASAASAMSAMSSTRRPTAAASPGAARERVDGDGDDSNRAGDASLAGLPRGVQPQASLRAAEPAAR
AHDPSRAARQRAQAGAAQADARDVRETQGTQVRYSFNSWDGRPAVELRFDAGGAPRVVNAQPSHDRVQRAMEHGADRLSP
GWTVEFDRSRADDDSGGRSPWRRARQEPEADER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44064; Mature: 43933

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSTISNSAPIAPIVSGVEPAQQSDAERTSDLQRAYREQCRAALGKRDDGRDCDDTEAQR
CCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
AHARKKTKRNGEPPGAAGGMPAPHAARDRAFALRFGGARLGEARSGANARDARVGAGAEA
HHHHHHHHCCCCCCCCCCCCCCCCHHHCCEEEEEECCCHHCHHHCCCCCCHHHCCCCCHH
GIEAGIEAGIEAGVGVGTDAHAAGGACTRGEIAARGGATMRGRAPASGAVRATSERAPAA
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEEECCCCCCCC
ATADAHAPQAAAESAPPSVPMPAAHAAPRTSGGSARDIAAAAARICATEADPAAGVVASR
CCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
SPALPAARGPASARAAASAASAMSAMSSTRRPTAAASPGAARERVDGDGDDSNRAGDASL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHH
AGLPRGVQPQASLRAAEPAARAHDPSRAARQRAQAGAAQADARDVRETQGTQVRYSFNSW
HCCCCCCCCHHHHHHCCCHHHCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEECCC
DGRPAVELRFDAGGAPRVVNAQPSHDRVQRAMEHGADRLSPGWTVEFDRSRADDDSGGRS
CCCCEEEEEECCCCCCCEECCCCCHHHHHHHHHHCHHHCCCCCEEEECCCCCCCCCCCCC
PWRRARQEPEADER
HHHHHHCCCCCCCC
>Mature Secondary Structure 
GSTISNSAPIAPIVSGVEPAQQSDAERTSDLQRAYREQCRAALGKRDDGRDCDDTEAQR
CCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
AHARKKTKRNGEPPGAAGGMPAPHAARDRAFALRFGGARLGEARSGANARDARVGAGAEA
HHHHHHHHCCCCCCCCCCCCCCCCHHHCCEEEEEECCCHHCHHHCCCCCCHHHCCCCCHH
GIEAGIEAGIEAGVGVGTDAHAAGGACTRGEIAARGGATMRGRAPASGAVRATSERAPAA
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEEECCCCCCCC
ATADAHAPQAAAESAPPSVPMPAAHAAPRTSGGSARDIAAAAARICATEADPAAGVVASR
CCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
SPALPAARGPASARAAASAASAMSAMSSTRRPTAAASPGAARERVDGDGDDSNRAGDASL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHH
AGLPRGVQPQASLRAAEPAARAHDPSRAARQRAQAGAAQADARDVRETQGTQVRYSFNSW
HCCCCCCCCHHHHHHCCCHHHCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEECCC
DGRPAVELRFDAGGAPRVVNAQPSHDRVQRAMEHGADRLSPGWTVEFDRSRADDDSGGRS
CCCCEEEEEECCCCCCCEECCCCCHHHHHHHHHHCHHHCCCCCEEEECCCCCCCCCCCCC
PWRRARQEPEADER
HHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA