| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
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The map label for this gene is 126443902
Identifier: 126443902
GI number: 126443902
Start: 2421456
End: 2423693
Strand: Reverse
Name: 126443902
Synonym: BURPS668_A2507
Alternate gene names: NA
Gene position: 2423693-2421456 (Counterclockwise)
Preceding gene: 126443743
Following gene: 126445060
Centisome position: 77.5
GC content: 69.08
Gene sequence:
>2238_bases ATGACATCCACATTCCTGCGTCACGCGCCCGCCGCGCGTGGAGACCACGCGCGCCGCCGGCGGCGCGCGATCACGCTTAC CGTTCCCGCGCTCGCCGCGGGCGCCTTTCACCTCGCGCCGGCCGTCGCGCAGACGAGCGAGGCCGTGCACGGCCACGGCA CGCTCGGCGCGTCCGGCGTAGCGAGCCGCGCCGAGACCGACGCGACGAGCGCCAAATCGGACGGCGCGGTTCGCGAAGCG GCGAGCCGCACGACAACCGGCGCCGCGCCGGACGCCACGATGCTGCCGACGATCGAAATCGTCGCGGCGCCCGAATCGAC GCCGCTCGTCGTCGTCACCGATCCGAAGACGCCGCGCCAGCCGCTGCCCGCGAGCGACGGCGCCGATTATCTGAAGACGA TTCCCGGCTTCGCGTCGATCCGCAGCGGCGGCACGAACGGCGACCCGGTGCTGCGCGGGATGTTCGGCTCGCGGCTGAAC ATTCTCGCGAACGGCATGCCGACGCTCGGTGCGTGTCCCGGCCGGATGGACGCGCCGACGTCGTACATCGCGCCCGAGAG CTACGACAAGGTGACGCTCGTCAAGGGGCCGCAGACCGTGCTGTACGGGCCGGGCGCATCGGCGGGCACGGTGCTGTTCG AGCGCGTGACGCCGCGCTTCAAGACGCCGGGCATGCGCTTTGACGGCAGCGTCGTCGGCGGCTCGTTCGGGCGCAACGAT CAGAACGTCGACGTGACGGCCGGCACGCCCGACTTCTACGGGCGCGTGAGCGCGAACCATGCGCACTCGCAGGACTACGA GGACGGCAACGGCCGCACGGTGCCGTCGCAATGGGACAAGTGGAACGCGGATGCGGCGCTCGGCTGGACGCCCGACGACA ACACGCGGCTCGAGCTGACGGCAGGCACGGGCGACGGCTACGCGCGCTATGCGGGCCGCGGAATGGACGGCGCGCATTTC CGGCGCGAGACGTTCGGTCTGAAGTTCGACAAGAAGCACATCGGCGACGTGCTCGATCGCATCGAGGCGCAGGTCTTCTA CAACGAAGCCGATCACGTGATGGACAACTACACGCTGCGGATGCCCGATCCGACGAGCAGCATGCCGATGCGCATGGCCT CCGAAGTGCGCCGCCGCACGCTCGGCGCGCGCGTCGCGGCGACGCTGCGCTTGACCGACGCGTTCAAGCTCGTGACGGGC GTCGATGCGCAGTCGAACCGCCTCGACTCGCGCTCGGCGATGGGGATGCAGAACTACGGCGACAAGCCGTGGAATCCGCA GGCGAACATGTGGAACGCGGGCGCGTTCGGCGAGCTGACCTGGTATGCGAGCGATGCGTCGCGCGTGATCGGCGGCGCGC GGATCGACTATGCGGCCGCGCGCGACAAGCGCGCGACGACGGGCGGCATGAAGATGAGCATGCGCAATCCGACGTTCGAC GATCTCCGCTCGCGCGTGCTGCCGAGCGGCTTCGTGCGCTACGAGCGTGATCTCGCGTCGCTGCCCGTCACGTGGTACGC GGGCATCGGCCATGCGCAGCGCTTTCCTGATTACTGGGAGCTGTTCTCCGCCAAGCGCGGCCCGAACGGTTCGATCAACG CGTTCTCCGCGATCAAGCCCGAGAAGACGACGCAGCTCGACATCGGCGCGCAGTACAAGAGCGACAAGCTCGACGCCTGG GTGTCCGCCTATGCGGGCTACGTGCAGGACTTCATCCTGTTCGACTATGCGACGGGCCCGATGGGACAGATCACGCGGGC GACGAACGTCAACGCGCAGATCATGGGCGGTGAGGTGGGCGCGTCGTGGCGTCCGCTCGCGCCGTGGCGCTTCGAAGGGT CGCTCGCGTATGCGTGGGGGCGCAACGTGCAAAGCGGTGCGCCGCTGCCGCAGATGCCGCCGCTCGAGGCACGCTTCGGC GTCGAGTACACTCGCGGGCCGTGGTCGGCGGGCGGGCTGTGGCGGGTCGTTGCGCCGCAGCATCGCTACGCGCTGAACGA GGGCAACGTCGTCGGCAAGGACTTTGGTCCGAGCGCCGGTTTCGGCGTGCTGTCGCTGCACGCGCAGTACCACGTGAGCA AGACGGTGCAGATCTCGGTCGGCGTCGACAACGTGCTCGACAAGGCTTATGCGGAGCACCTGAACCTCGCGGGCAACGCC GGTTTCGGCTATCCGGCGAATCTGCCTGTCACCGAACCCGGCCGCACCGCGTGGGTTCGTTTGAGCACCAAGCTCTGA
Upstream 100 bases:
>100_bases GACAGACGCCTGAACGTCCGATTTCATTTCCGTTCACGCCGTCCCCGCCTCCGTTCGATCCGACGATCGCGCGGAAGGGG CGTCTTTCGAGTTGCGATTC
Downstream 100 bases:
>100_bases TCCTTTCCGCGTTCTTCCTCCCCCGCATCGCAGTGCAGCATCCGCGATGCGGGCGGCCAACCCGCTTGACTCCCCTGCTT GCGTCAATCGATTAGAGAGC
Product: TonB-dependent copper receptor
Products: NA
Alternate protein names: NB-Dependent Copper Receptor; NB Dependent Receptor; NB-Dependent Receptor Protein; Outer Membrane Copper Receptor; Outer Membrane Protein C; Nb-Dependent Receptor; Outer Membrane Copper Receptor OprC; Outer Membrane Receptor Protein; Outer Membrane Protein; Outer Membrane Protein OprC; Exported Heme Receptor Protein; Outer Membrane Protein OprC Complement; Iron Complex Outermembrane Recepter Protein; NB-Dependent Receptor Plug; Outer Membrane Heme Receptor; Outer Membrane Insertion C-Terminal Signal; NB-Dependent Outer Membrane Receptor; NB-Dependent Siderophore Receptor Family Protein; Outer Membrane Protein NosA; IMP Dehydrogenase/GMP Reductase; Outer Membrane Protein Nosa; Nb-Dependent Copper Receptor; Outer Membrane nB-Dependent Heme Receptor; N-B Dependent Receptor; NB-Dependent Haemoglobin/Transferrin/Lactoferrin Receptor; NB-Dependent Receptor Plug Domain-Containing; Haem/Haemoglobin Uptake Outer Membrane Receptor PhuR; Ferrienterochelin/Colicin Outer Membrane Receptor; Outer Membrane Receptor Protein Mostly Fe Transport; NosA Protein; Membrane Receptor Protein; NB-Dependent Outer Membrane Heme Receptor; NB-Dependent Receptor Domain Protein; Outer Membrane Receptor Proteins
Number of amino acids: Translated: 745; Mature: 744
Protein sequence:
>745_residues MTSTFLRHAPAARGDHARRRRRAITLTVPALAAGAFHLAPAVAQTSEAVHGHGTLGASGVASRAETDATSAKSDGAVREA ASRTTTGAAPDATMLPTIEIVAAPESTPLVVVTDPKTPRQPLPASDGADYLKTIPGFASIRSGGTNGDPVLRGMFGSRLN ILANGMPTLGACPGRMDAPTSYIAPESYDKVTLVKGPQTVLYGPGASAGTVLFERVTPRFKTPGMRFDGSVVGGSFGRND QNVDVTAGTPDFYGRVSANHAHSQDYEDGNGRTVPSQWDKWNADAALGWTPDDNTRLELTAGTGDGYARYAGRGMDGAHF RRETFGLKFDKKHIGDVLDRIEAQVFYNEADHVMDNYTLRMPDPTSSMPMRMASEVRRRTLGARVAATLRLTDAFKLVTG VDAQSNRLDSRSAMGMQNYGDKPWNPQANMWNAGAFGELTWYASDASRVIGGARIDYAAARDKRATTGGMKMSMRNPTFD DLRSRVLPSGFVRYERDLASLPVTWYAGIGHAQRFPDYWELFSAKRGPNGSINAFSAIKPEKTTQLDIGAQYKSDKLDAW VSAYAGYVQDFILFDYATGPMGQITRATNVNAQIMGGEVGASWRPLAPWRFEGSLAYAWGRNVQSGAPLPQMPPLEARFG VEYTRGPWSAGGLWRVVAPQHRYALNEGNVVGKDFGPSAGFGVLSLHAQYHVSKTVQISVGVDNVLDKAYAEHLNLAGNA GFGYPANLPVTEPGRTAWVRLSTKL
Sequences:
>Translated_745_residues MTSTFLRHAPAARGDHARRRRRAITLTVPALAAGAFHLAPAVAQTSEAVHGHGTLGASGVASRAETDATSAKSDGAVREA ASRTTTGAAPDATMLPTIEIVAAPESTPLVVVTDPKTPRQPLPASDGADYLKTIPGFASIRSGGTNGDPVLRGMFGSRLN ILANGMPTLGACPGRMDAPTSYIAPESYDKVTLVKGPQTVLYGPGASAGTVLFERVTPRFKTPGMRFDGSVVGGSFGRND QNVDVTAGTPDFYGRVSANHAHSQDYEDGNGRTVPSQWDKWNADAALGWTPDDNTRLELTAGTGDGYARYAGRGMDGAHF RRETFGLKFDKKHIGDVLDRIEAQVFYNEADHVMDNYTLRMPDPTSSMPMRMASEVRRRTLGARVAATLRLTDAFKLVTG VDAQSNRLDSRSAMGMQNYGDKPWNPQANMWNAGAFGELTWYASDASRVIGGARIDYAAARDKRATTGGMKMSMRNPTFD DLRSRVLPSGFVRYERDLASLPVTWYAGIGHAQRFPDYWELFSAKRGPNGSINAFSAIKPEKTTQLDIGAQYKSDKLDAW VSAYAGYVQDFILFDYATGPMGQITRATNVNAQIMGGEVGASWRPLAPWRFEGSLAYAWGRNVQSGAPLPQMPPLEARFG VEYTRGPWSAGGLWRVVAPQHRYALNEGNVVGKDFGPSAGFGVLSLHAQYHVSKTVQISVGVDNVLDKAYAEHLNLAGNA GFGYPANLPVTEPGRTAWVRLSTKL >Mature_744_residues TSTFLRHAPAARGDHARRRRRAITLTVPALAAGAFHLAPAVAQTSEAVHGHGTLGASGVASRAETDATSAKSDGAVREAA SRTTTGAAPDATMLPTIEIVAAPESTPLVVVTDPKTPRQPLPASDGADYLKTIPGFASIRSGGTNGDPVLRGMFGSRLNI LANGMPTLGACPGRMDAPTSYIAPESYDKVTLVKGPQTVLYGPGASAGTVLFERVTPRFKTPGMRFDGSVVGGSFGRNDQ NVDVTAGTPDFYGRVSANHAHSQDYEDGNGRTVPSQWDKWNADAALGWTPDDNTRLELTAGTGDGYARYAGRGMDGAHFR RETFGLKFDKKHIGDVLDRIEAQVFYNEADHVMDNYTLRMPDPTSSMPMRMASEVRRRTLGARVAATLRLTDAFKLVTGV DAQSNRLDSRSAMGMQNYGDKPWNPQANMWNAGAFGELTWYASDASRVIGGARIDYAAARDKRATTGGMKMSMRNPTFDD LRSRVLPSGFVRYERDLASLPVTWYAGIGHAQRFPDYWELFSAKRGPNGSINAFSAIKPEKTTQLDIGAQYKSDKLDAWV SAYAGYVQDFILFDYATGPMGQITRATNVNAQIMGGEVGASWRPLAPWRFEGSLAYAWGRNVQSGAPLPQMPPLEARFGV EYTRGPWSAGGLWRVVAPQHRYALNEGNVVGKDFGPSAGFGVLSLHAQYHVSKTVQISVGVDNVLDKAYAEHLNLAGNAG FGYPANLPVTEPGRTAWVRLSTKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80268; Mature: 80137
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSTFLRHAPAARGDHARRRRRAITLTVPALAAGAFHLAPAVAQTSEAVHGHGTLGASGV CCCCHHHCCCCCCCHHHHHHCEEEEEEEHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCC ASRAETDATSAKSDGAVREAASRTTTGAAPDATMLPTIEIVAAPESTPLVVVTDPKTPRQ CCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCC PLPASDGADYLKTIPGFASIRSGGTNGDPVLRGMFGSRLNILANGMPTLGACPGRMDAPT CCCCCCCCHHHHHCCCHHHHCCCCCCCCHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCC SYIAPESYDKVTLVKGPQTVLYGPGASAGTVLFERVTPRFKTPGMRFDGSVVGGSFGRND CCCCCCCCCEEEEEECCCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCC QNVDVTAGTPDFYGRVSANHAHSQDYEDGNGRTVPSQWDKWNADAALGWTPDDNTRLELT CCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEE AGTGDGYARYAGRGMDGAHFRRETFGLKFDKKHIGDVLDRIEAQVFYNEADHVMDNYTLR ECCCCCHHHHCCCCCCCHHHHHHHCCCEECHHHHHHHHHHHHHHHEECCHHHHHCCCEEE MPDPTSSMPMRMASEVRRRTLGARVAATLRLTDAFKLVTGVDAQSNRLDSRSAMGMQNYG CCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEHHHHHHHHCCCCHHCCCCHHHHCCHHHCC DKPWNPQANMWNAGAFGELTWYASDASRVIGGARIDYAAARDKRATTGGMKMSMRNPTFD CCCCCCCCCCCCCCCCCEEEEEECCHHHHHCCCEEEHHHHCCCCCCCCCEEEEECCCCHH DLRSRVLPSGFVRYERDLASLPVTWYAGIGHAQRFPDYWELFSAKRGPNGSINAFSAIKP HHHHHHCCCHHHHHHHHHHHCCEEEEECCCCHHHCCHHHHHHHCCCCCCCCCCEEECCCC EKTTQLDIGAQYKSDKLDAWVSAYAGYVQDFILFDYATGPMGQITRATNVNAQIMGGEVG CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEECCCCEEEECCCCC ASWRPLAPWRFEGSLAYAWGRNVQSGAPLPQMPPLEARFGVEYTRGPWSAGGLWRVVAPQ CCCCCCCCEEECCCEEEEECCCCCCCCCCCCCCCCCHHCCCEECCCCCCCCCEEEEECCC HRYALNEGNVVGKDFGPSAGFGVLSLHAQYHVSKTVQISVGVDNVLDKAYAEHLNLAGNA HHEECCCCCEECCCCCCCCCCCEEEEEEEEEECEEEEEEECHHHHHHHHHHHHHCCCCCC GFGYPANLPVTEPGRTAWVRLSTKL CCCCCCCCCCCCCCCEEEEEEEECC >Mature Secondary Structure TSTFLRHAPAARGDHARRRRRAITLTVPALAAGAFHLAPAVAQTSEAVHGHGTLGASGV CCCHHHCCCCCCCHHHHHHCEEEEEEEHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCC ASRAETDATSAKSDGAVREAASRTTTGAAPDATMLPTIEIVAAPESTPLVVVTDPKTPRQ CCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCC PLPASDGADYLKTIPGFASIRSGGTNGDPVLRGMFGSRLNILANGMPTLGACPGRMDAPT CCCCCCCCHHHHHCCCHHHHCCCCCCCCHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCC SYIAPESYDKVTLVKGPQTVLYGPGASAGTVLFERVTPRFKTPGMRFDGSVVGGSFGRND CCCCCCCCCEEEEEECCCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCC QNVDVTAGTPDFYGRVSANHAHSQDYEDGNGRTVPSQWDKWNADAALGWTPDDNTRLELT CCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEE AGTGDGYARYAGRGMDGAHFRRETFGLKFDKKHIGDVLDRIEAQVFYNEADHVMDNYTLR ECCCCCHHHHCCCCCCCHHHHHHHCCCEECHHHHHHHHHHHHHHHEECCHHHHHCCCEEE MPDPTSSMPMRMASEVRRRTLGARVAATLRLTDAFKLVTGVDAQSNRLDSRSAMGMQNYG CCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEHHHHHHHHCCCCHHCCCCHHHHCCHHHCC DKPWNPQANMWNAGAFGELTWYASDASRVIGGARIDYAAARDKRATTGGMKMSMRNPTFD CCCCCCCCCCCCCCCCCEEEEEECCHHHHHCCCEEEHHHHCCCCCCCCCEEEEECCCCHH DLRSRVLPSGFVRYERDLASLPVTWYAGIGHAQRFPDYWELFSAKRGPNGSINAFSAIKP HHHHHHCCCHHHHHHHHHHHCCEEEEECCCCHHHCCHHHHHHHCCCCCCCCCCEEECCCC EKTTQLDIGAQYKSDKLDAWVSAYAGYVQDFILFDYATGPMGQITRATNVNAQIMGGEVG CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEECCCCEEEECCCCC ASWRPLAPWRFEGSLAYAWGRNVQSGAPLPQMPPLEARFGVEYTRGPWSAGGLWRVVAPQ CCCCCCCCEEECCCEEEEECCCCCCCCCCCCCCCCCHHCCCEECCCCCCCCCEEEEECCC HRYALNEGNVVGKDFGPSAGFGVLSLHAQYHVSKTVQISVGVDNVLDKAYAEHLNLAGNA HHEECCCCCEECCCCCCCCCCCEEEEEEEEEECEEEEEEECHHHHHHHHHHHHHCCCCCC GFGYPANLPVTEPGRTAWVRLSTKL CCCCCCCCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA