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The map label for this gene is cyc1 [H]

Identifier: 126443607

GI number: 126443607

Start: 925906

End: 926925

Strand: Reverse

Name: cyc1 [H]

Synonym: BURPS668_A0947

Alternate gene names: 126443607

Gene position: 926925-925906 (Counterclockwise)

Preceding gene: 126444598

Following gene: 126442548

Centisome position: 29.64

GC content: 71.08

Gene sequence:

>1020_bases
ATGCCCGCCACACCCGCGCCAACGCCGCCGGATCGACCGCTCGTCGGCGAAGCGTTCCGCATTGCCTCGATCGAACGTTC
GTTTGAGCGCCGTTTCGATCCGCACCGGCGCGCGCTGCACGCGCATTGCGTCCGATGGATCGGCGAGCAGTCGCTCGCGC
CCGCCGGATCGCCGCCGGCCGACCTGCGCGCGCTCCGCTATCCGGACCTCGTCGCCGGCTATTACGTCGGCGCGCCGCCG
GCCGTGCTCGAAGCGATCGCCGATCTGTCGATCTGGTTCTTCGTCTGGGACGACCGGCACGACGAGGACGCACGGCGGTT
GCGCCGCGCCGCGTGGGCACGCCTGCGCGACGCGCTGGGCGCGGTGCTCGCTTCGCCGCATGCGCGCGTCGCCGACGCGG
AGCCGATCGTCGGCGCGTTGGCCGATTGCATCGTGCGGATCCGCGCGCGGCTTGGCGACGCCTGGAACCGGCGCTTCACC
GGCCATCTGCGGCAGGTGATCGACGCCTACGACGACGAATTCCGCGCGCGCCTGGCGGCGCGCATCCCGACGCGCGACGC
GTACATGCGGTTACGCGAACGCACGTTCGGCTGTGAAGTCTGGCTCGACTGCCTCGAACTCGCGGCTGGCCGCGCGCTAC
CCGACGCGGTGCGCGCCGCGCCGCCGTATCGGCTCGCCGGCCGCGCGTCGCAGCAATTCGCCGCGCTTTACAACGATCTC
TGTTCGCTGCGCAAGGAGCGCGAAGCCGGAGAAATCCACAATCTCGGCATTTCGTTGATGCATCACGAGCGGATGTCGCT
GCGGGCCGCGATGCGCGAGATGCGCGCGCTGGCGAGCGCGCAGGTCGAGCGCTTCCTGGCCGGCCAGGGCGAGCTGCTGC
GCTTCGTCGCCGCGAGCGGGGCACCGCCCGAGATCGCCGCGGCGGCCCGCCACTGCGCGGCGAACATGGGCAACTGGATC
TCGTCGGTCTACTGGTTCCACCACGAATCGGACCGTTACGGCACCGCGCGCGACTTTTGA

Upstream 100 bases:

>100_bases
TTCGATCGATAGCCGTTCGGCGCAGGATCGACGATCATCTTCGCATGGACGCGATGCGTTCCAACGCTGCATCGCCGCAC
GCCAGCCGAAGGAGGCCACC

Downstream 100 bases:

>100_bases
TGACGGCCAGACGTCGGCGATGTGCGCGGCCCACCCGCGCCGACGACGGCGCACGGTCGCGGCGGCCGCGAGGCTCCGCG
CGTCGACGGGCCGCCCCCCG

Product: lyase

Products: NA

Alternate protein names: EIZS; Sesquiterpene cyclase; Sesquiterpene synthase [H]

Number of amino acids: Translated: 339; Mature: 338

Protein sequence:

>339_residues
MPATPAPTPPDRPLVGEAFRIASIERSFERRFDPHRRALHAHCVRWIGEQSLAPAGSPPADLRALRYPDLVAGYYVGAPP
AVLEAIADLSIWFFVWDDRHDEDARRLRRAAWARLRDALGAVLASPHARVADAEPIVGALADCIVRIRARLGDAWNRRFT
GHLRQVIDAYDDEFRARLAARIPTRDAYMRLRERTFGCEVWLDCLELAAGRALPDAVRAAPPYRLAGRASQQFAALYNDL
CSLRKEREAGEIHNLGISLMHHERMSLRAAMREMRALASAQVERFLAGQGELLRFVAASGAPPEIAAAARHCAANMGNWI
SSVYWFHHESDRYGTARDF

Sequences:

>Translated_339_residues
MPATPAPTPPDRPLVGEAFRIASIERSFERRFDPHRRALHAHCVRWIGEQSLAPAGSPPADLRALRYPDLVAGYYVGAPP
AVLEAIADLSIWFFVWDDRHDEDARRLRRAAWARLRDALGAVLASPHARVADAEPIVGALADCIVRIRARLGDAWNRRFT
GHLRQVIDAYDDEFRARLAARIPTRDAYMRLRERTFGCEVWLDCLELAAGRALPDAVRAAPPYRLAGRASQQFAALYNDL
CSLRKEREAGEIHNLGISLMHHERMSLRAAMREMRALASAQVERFLAGQGELLRFVAASGAPPEIAAAARHCAANMGNWI
SSVYWFHHESDRYGTARDF
>Mature_338_residues
PATPAPTPPDRPLVGEAFRIASIERSFERRFDPHRRALHAHCVRWIGEQSLAPAGSPPADLRALRYPDLVAGYYVGAPPA
VLEAIADLSIWFFVWDDRHDEDARRLRRAAWARLRDALGAVLASPHARVADAEPIVGALADCIVRIRARLGDAWNRRFTG
HLRQVIDAYDDEFRARLAARIPTRDAYMRLRERTFGCEVWLDCLELAAGRALPDAVRAAPPYRLAGRASQQFAALYNDLC
SLRKEREAGEIHNLGISLMHHERMSLRAAMREMRALASAQVERFLAGQGELLRFVAASGAPPEIAAAARHCAANMGNWIS
SVYWFHHESDRYGTARDF

Specific function: Catalyzes the cyclization of farnesyl diphosphate (FPP) to the sesquiterpene epi-isozizaene [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the terpene synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005630
- InterPro:   IPR008949 [H]

Pfam domain/function: PF03936 Terpene_synth_C [H]

EC number: =4.2.3.37 [H]

Molecular weight: Translated: 38003; Mature: 37871

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPATPAPTPPDRPLVGEAFRIASIERSFERRFDPHRRALHAHCVRWIGEQSLAPAGSPPA
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCH
DLRALRYPDLVAGYYVGAPPAVLEAIADLSIWFFVWDDRHDEDARRLRRAAWARLRDALG
HHHHHCCCHHHHCCCCCCCHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
AVLASPHARVADAEPIVGALADCIVRIRARLGDAWNRRFTGHLRQVIDAYDDEFRARLAA
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RIPTRDAYMRLRERTFGCEVWLDCLELAAGRALPDAVRAAPPYRLAGRASQQFAALYNDL
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHCCHHHHHHHHHHHH
CSLRKEREAGEIHNLGISLMHHERMSLRAAMREMRALASAQVERFLAGQGELLRFVAASG
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
APPEIAAAARHCAANMGNWISSVYWFHHESDRYGTARDF
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
PATPAPTPPDRPLVGEAFRIASIERSFERRFDPHRRALHAHCVRWIGEQSLAPAGSPPA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCH
DLRALRYPDLVAGYYVGAPPAVLEAIADLSIWFFVWDDRHDEDARRLRRAAWARLRDALG
HHHHHCCCHHHHCCCCCCCHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
AVLASPHARVADAEPIVGALADCIVRIRARLGDAWNRRFTGHLRQVIDAYDDEFRARLAA
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RIPTRDAYMRLRERTFGCEVWLDCLELAAGRALPDAVRAAPPYRLAGRASQQFAALYNDL
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHCCHHHHHHHHHHHH
CSLRKEREAGEIHNLGISLMHHERMSLRAAMREMRALASAQVERFLAGQGELLRFVAASG
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
APPEIAAAARHCAANMGNWISSVYWFHHESDRYGTARDF
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12000953 [H]