| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
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The map label for this gene is 126443489
Identifier: 126443489
GI number: 126443489
Start: 1121407
End: 1121931
Strand: Reverse
Name: 126443489
Synonym: BURPS668_A1180
Alternate gene names: NA
Gene position: 1121931-1121407 (Counterclockwise)
Preceding gene: 126442988
Following gene: 126444760
Centisome position: 35.87
GC content: 67.05
Gene sequence:
>525_bases ATGGGCGGATCCATTTCGAAAAGCAGCGATGCGGTGTCGACCGCGTCGATCCCGGCCACTCAATCGCACGCCGACACGGA CACGGCGTCGAAGGCTTCATCGCACTCGGCGCAGCGCAGGCCTTCGTCCGGCGCATTCGAAGGGCTGATGCCGCTTGCGC AAAAAGGCACCGTCGGCGAACTCCAGAATTTCGCCGCCGCGGCGTTTGCCGCGACGACGGGCGCGTCGCCCGCGCTCGTC GATGCGGCGCATCACAATCCCGCGATGCAGACCTTGCGCGAGCAGCCGATGACGCAGGAAAACGTCACTCAGCTATGCCA GATGGAAACCGACGCCGCCCGCAAGGGCGACCCGGCCAACTGGCAAAACCGGCTGGCGGCGAGCTCGGTCGCGGACGTCG CGCGGCATGCCGTCGCCCAGACGGTGGCGCTGAACGTCTCGCTCGGCCGCGACGGCCCGATAAAAACGCAGGAGGAAGGC GGCTGGAACGTGCATGAGCACGTCATCGGCGTGCACGGCAGCTGA
Upstream 100 bases:
>100_bases CGACGCGGCTTCCGCCGCGGCCACGCGCTGCGCCCCGGCTTGCCGATACTCGCCACACCGCATCGGTCGCACCGCACCGA CGGTCAATCAAGGAGGCAAC
Downstream 100 bases:
>100_bases ACGCGGGCAATCCCGCCCGGCGCGCGACCGAGCCGCCGCCGGGCGCGCCGCCGCGCATCACGCGACGTAGCCGGCGACGC TGACGAACTGGCACAGGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MGGSISKSSDAVSTASIPATQSHADTDTASKASSHSAQRRPSSGAFEGLMPLAQKGTVGELQNFAAAAFAATTGASPALV DAAHHNPAMQTLREQPMTQENVTQLCQMETDAARKGDPANWQNRLAASSVADVARHAVAQTVALNVSLGRDGPIKTQEEG GWNVHEHVIGVHGS
Sequences:
>Translated_174_residues MGGSISKSSDAVSTASIPATQSHADTDTASKASSHSAQRRPSSGAFEGLMPLAQKGTVGELQNFAAAAFAATTGASPALV DAAHHNPAMQTLREQPMTQENVTQLCQMETDAARKGDPANWQNRLAASSVADVARHAVAQTVALNVSLGRDGPIKTQEEG GWNVHEHVIGVHGS >Mature_173_residues GGSISKSSDAVSTASIPATQSHADTDTASKASSHSAQRRPSSGAFEGLMPLAQKGTVGELQNFAAAAFAATTGASPALVD AAHHNPAMQTLREQPMTQENVTQLCQMETDAARKGDPANWQNRLAASSVADVARHAVAQTVALNVSLGRDGPIKTQEEGG WNVHEHVIGVHGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17963; Mature: 17832
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGSISKSSDAVSTASIPATQSHADTDTASKASSHSAQRRPSSGAFEGLMPLAQKGTVGE CCCCCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHH LQNFAAAAFAATTGASPALVDAAHHNPAMQTLREQPMTQENVTQLCQMETDAARKGDPAN HHHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCC WQNRLAASSVADVARHAVAQTVALNVSLGRDGPIKTQEEGGWNVHEHVIGVHGS HHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCHHHHEEECCCC >Mature Secondary Structure GGSISKSSDAVSTASIPATQSHADTDTASKASSHSAQRRPSSGAFEGLMPLAQKGTVGE CCCCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHH LQNFAAAAFAATTGASPALVDAAHHNPAMQTLREQPMTQENVTQLCQMETDAARKGDPAN HHHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCC WQNRLAASSVADVARHAVAQTVALNVSLGRDGPIKTQEEGGWNVHEHVIGVHGS HHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCHHHHEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA