| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
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The map label for this gene is ycdQ [C]
Identifier: 126443432
GI number: 126443432
Start: 2515381
End: 2516361
Strand: Reverse
Name: ycdQ [C]
Synonym: BURPS668_A2618
Alternate gene names: 126443432
Gene position: 2516361-2515381 (Counterclockwise)
Preceding gene: 126442327
Following gene: 126442857
Centisome position: 80.46
GC content: 71.66
Gene sequence:
>981_bases ATGACGCGCGCTTGTTCGATCGACGAGGTGACGATGAAAATTTCCGTACTCGTGCCGACCTTCCGGCGCCCCGCGGATCT CGCCCGCTGTCTGATCGCGCTGCAGCGGCAGCGCGTCGCGCCCGACGAGGTGATCGTCGTCGCGCGTCCCGACGACGACG TGACGCACGAGCGGCTTGCCGATCCCGCCGTGCGCGGCGCGCTCGCGCTGCGGATCGTGACGGTCGACGTGCCGGGACAG GTGGCGGCGCTCAACCGCGGGCTCGACGCCGCGCGCGGCGACGTGATCGCGATCACCGACGACGACGCCGCGCCGCGTGT CGACTGGATCGAGCGGATCGGCGCGATCTTCGCCGCCGATCCGCGCGTCGGCGCGGTGGGCGGCCGCGACTGGGTGCACG AGAAGGGCCGGCTGCTCGACGGCGAGCAGCCGCTCGTCGGCAGGCTCACGGTGTCGGGCAAGATCGTCGGCAATCACCAT CTCGGCGTCGGCGGCGCGCGCGAGGTCGATACCCTCAAGGGGGCGAACATGAGCTATCGCCGCACGGCGATCGAGGGGCT GCGCTTCGATACGCGCCTGCGCGGCGCGGGCGCGCAGACGCACAACGATACGTCGTTCAGCATGTGCGTGAAGCGCGCGG GCTGGAAGCTCGTCTACGACCCGGCCGTCGCCGTCGACCATTACCCGGCCGAACGCTTCGACGACGATCGCCGCGACGCC GCGTCGATGGCCGCGCTGTCGAACGCCGCCTACAACCTGCATCTGACGTTGCGCGAGCATTTGTCGCCCGTGCGGCGCGA GATCGCGTGGTGGTGGTGGACGTTCGTCGGCACCCGTGCGTATCCGGGGCTCGTGCACGTCGTGTTGAGCGCCGCCGCGA AGAACGGTGCGAGCATGCGCGCGCGCTGGCGCGCGGTGCGGCGGGGCGCGCGCGACGCGCGGCGCGTGAGCATCGCACCT CACGCCGGCATCGCGCAGTGA
Upstream 100 bases:
>100_bases CCGCGGGCGTGCAACTGCAAGGCGGGATCTTCAACGGCGTGCCGGCGCGCACGCGCGGCTACGGCCGCGGCTATGCGGCC GTGCACGAATATCTGAGCGC
Downstream 100 bases:
>100_bases GCGGCAGGTCGCAGATTCAATCGATTCGGGCTGGAGTTTTCGCATGATTGCCACGAAGGTTCACGTTCATCTGTTTTACG GCGCGGATCCGCGCACCTAC
Product: glycosyl transferase group 2 family protein
Products: NA
Alternate protein names: Glycosyl Transferase Family Protein; Glycosyl Transferase; Glycosyl Transferase Group 2 Family Protein; Glycoside Hydrolase Family 2 Protein; Glycosyl Transferase Family 2 Protein; Family 2 Glycosyl Transferase
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MTRACSIDEVTMKISVLVPTFRRPADLARCLIALQRQRVAPDEVIVVARPDDDVTHERLADPAVRGALALRIVTVDVPGQ VAALNRGLDAARGDVIAITDDDAAPRVDWIERIGAIFAADPRVGAVGGRDWVHEKGRLLDGEQPLVGRLTVSGKIVGNHH LGVGGAREVDTLKGANMSYRRTAIEGLRFDTRLRGAGAQTHNDTSFSMCVKRAGWKLVYDPAVAVDHYPAERFDDDRRDA ASMAALSNAAYNLHLTLREHLSPVRREIAWWWWTFVGTRAYPGLVHVVLSAAAKNGASMRARWRAVRRGARDARRVSIAP HAGIAQ
Sequences:
>Translated_326_residues MTRACSIDEVTMKISVLVPTFRRPADLARCLIALQRQRVAPDEVIVVARPDDDVTHERLADPAVRGALALRIVTVDVPGQ VAALNRGLDAARGDVIAITDDDAAPRVDWIERIGAIFAADPRVGAVGGRDWVHEKGRLLDGEQPLVGRLTVSGKIVGNHH LGVGGAREVDTLKGANMSYRRTAIEGLRFDTRLRGAGAQTHNDTSFSMCVKRAGWKLVYDPAVAVDHYPAERFDDDRRDA ASMAALSNAAYNLHLTLREHLSPVRREIAWWWWTFVGTRAYPGLVHVVLSAAAKNGASMRARWRAVRRGARDARRVSIAP HAGIAQ >Mature_325_residues TRACSIDEVTMKISVLVPTFRRPADLARCLIALQRQRVAPDEVIVVARPDDDVTHERLADPAVRGALALRIVTVDVPGQV AALNRGLDAARGDVIAITDDDAAPRVDWIERIGAIFAADPRVGAVGGRDWVHEKGRLLDGEQPLVGRLTVSGKIVGNHHL GVGGAREVDTLKGANMSYRRTAIEGLRFDTRLRGAGAQTHNDTSFSMCVKRAGWKLVYDPAVAVDHYPAERFDDDRRDAA SMAALSNAAYNLHLTLREHLSPVRREIAWWWWTFVGTRAYPGLVHVVLSAAAKNGASMRARWRAVRRGARDARRVSIAPH AGIAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35699; Mature: 35568
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRACSIDEVTMKISVLVPTFRRPADLARCLIALQRQRVAPDEVIVVARPDDDVTHERLA CCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHC DPAVRGALALRIVTVDVPGQVAALNRGLDAARGDVIAITDDDAAPRVDWIERIGAIFAAD CHHHHCEEEEEEEEEECCCCHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHEECC PRVGAVGGRDWVHEKGRLLDGEQPLVGRLTVSGKIVGNHHLGVGGAREVDTLKGANMSYR CCCCCCCCCHHHHHCCCCCCCCCCCEEEEEEEEEEEECCEECCCCCCCHHHHCCCCCHHH RTAIEGLRFDTRLRGAGAQTHNDTSFSMCVKRAGWKLVYDPAVAVDHYPAERFDDDRRDA HHHHHCCCCCCEECCCCCCCCCCCHHHHHHHHCCCEEEECCEEEECCCCHHHCCCHHHHH ASMAALSNAAYNLHLTLREHLSPVRREIAWWWWTFVGTRAYPGLVHVVLSAAAKNGASMR HHHHHHHCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHH ARWRAVRRGARDARRVSIAPHAGIAQ HHHHHHHHCCCHHHEEEECCCCCCCC >Mature Secondary Structure TRACSIDEVTMKISVLVPTFRRPADLARCLIALQRQRVAPDEVIVVARPDDDVTHERLA CCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHC DPAVRGALALRIVTVDVPGQVAALNRGLDAARGDVIAITDDDAAPRVDWIERIGAIFAAD CHHHHCEEEEEEEEEECCCCHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHEECC PRVGAVGGRDWVHEKGRLLDGEQPLVGRLTVSGKIVGNHHLGVGGAREVDTLKGANMSYR CCCCCCCCCHHHHHCCCCCCCCCCCEEEEEEEEEEEECCEECCCCCCCHHHHCCCCCHHH RTAIEGLRFDTRLRGAGAQTHNDTSFSMCVKRAGWKLVYDPAVAVDHYPAERFDDDRRDA HHHHHCCCCCCEECCCCCCCCCCCHHHHHHHHCCCEEEECCEEEECCCCHHHCCCHHHHH ASMAALSNAAYNLHLTLREHLSPVRREIAWWWWTFVGTRAYPGLVHVVLSAAAKNGASMR HHHHHHHCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHH ARWRAVRRGARDARRVSIAPHAGIAQ HHHHHHHHCCCHHHEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA