| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
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The map label for this gene is epsB [H]
Identifier: 126442327
GI number: 126442327
Start: 2516358
End: 2518577
Strand: Reverse
Name: epsB [H]
Synonym: BURPS668_A2619
Alternate gene names: 126442327
Gene position: 2518577-2516358 (Counterclockwise)
Preceding gene: 126445515
Following gene: 126443432
Centisome position: 80.53
GC content: 67.84
Gene sequence:
>2220_bases ATGGTGAATACGCAAGCGAAACATCCTTATGCCGACCTCGCGGCGAAGACCGACGAGGAAGACGTCGTCCTGGGCCAGAT GATCCAGGTGATTCTCGACGATATCTGGCTGCTCCTCGGCATCGCGTTGGTCGTGGTCGCGCTCGCCGGGCTCTACTGCT ACGTCGCGAAGCCGCTCTATTCGGCCGATGCGCAGGTGCGGGTGGAGGCGAGCGACAACACGTCGCAGGCGCTTACGCAG ACGCAGACGGGCGCGATGATCAACAGCGGGCCGCCGACGCCGCCCACCGATGCGGAAATCGAGATCATCAAGAGCCGCGG CGTCGTCGCGCCGGTCGTCGAGCAGTTCAAGCTGAACGTGTCGGTCACGCCGAACACGTTGCCGATTCTCGGCGCGATCG CCGCGCGGCTCGCGACGCCGGGCCATCCGGGCAAACCGTGGCTCGGCTTGTCGTCGTACGCGTGGGGCGGCGAGGAGGCG AGCATCGATTCGATCGACGTGACGCCCGCGCTCGAAGGCAAGCAGCTCACGCTCACGGCCGGCGCGGACGGCGGCTACGC GCTCGCCGATCCGGACGGCGCGGTGCTCGTGCGCGGCAAGGTCGGCGAGCGCGAGCAGGGCGGCGGCGTGACGATCAACG TCTCGAAGCTCGTCGCGCGCCCCGGCACGCGCTTCACGGTAGTCCGGCAGAACGATCTCGATGCGATCACCGCGTTCCAG TCGGCGATCCAGGTGGCCGAGCAGGGCAAGCAGACCGGCGTGATCCAGATCTCGCTCGAAGGCAAGGACCCCGAACAGAC CGCGCAGATCGCGAACGCGCTCGCGCAGTCGTATCTGCATCAGCACGTGACGAGCAAGCAGGCCGAAGCGACGAAGATGC TCGAGTTCCTGAAGAACGAAGAGCCGCGCCTGAAATCGGACCTCGAGCGCGCGGAGGCGGAGCTCACCCAGTATCAGCGC ACGTCGGGCTCGATCAACGCGAGCGACGAAGCGAAAGTCTACCTCGAAGGCAGCGTCCAGTACGAGCAGCAGGTCGCCGC GCAGCGGCTGCAGCTCGCGGCGCTCGCGCAGCGTTACACGGACGAGCATCCGCTCGTCGTCGCGGCGAAGCAGCAGCTCG GCCAGCTCGAGGCGGAGCGCGCGAAGTACGACGGCAAGTTCCGCGGGCTGCCGGCGACCGAAGTCAAGGCTGTCGCGTTG CAGCGCAACGCGAAGGTCGCGGAAGACATCTACGTGCTGCTGCTCAACCGCGTGCAGGAGCTGTCGGTGCAGAAGGCCGG CACGGGCGGCAACATCCGCCTCGTCGATGCGGCGCTGCGCCCGGGCGTGCCGGTCAAGCCGAAGAAGGTGCTGGTCCTGT CGGCGGCGACGCTGCTCGGCCTGATCCTCGGCACGAGCGTCGTGTTCCTGCGCCGCAACCTGTTCCATGGCATCGAGGAT CCGGATCGCGTCGAGCGCGCGTTCAACCTGCCGCTGTACGGCCTCGTGCCGATGAGCGCGGAGCAGGCGCGATTCGATGC CGCGGACAAGGGCAATCGCGTGCGGCCGATTCTCGCGTGCGCGCGGCCGAAGGATCTGAGCGTCGAAAGCCTGCGCAGCC TGCGCACCGCGATGCAGTTCGCGCTGATGGATGCGAAGAACCGCGTGATCGTGCTGACCGGGCCGACCCCCGGCATCGGC AAGAGCTTTCTCGCGGTCAACCTCGCCGCGCTCGTCGCGCATTCGGGCAAGCGTGTGCTGCTGATCGACGCGGACATGCG GCGCGGCTCGCTCGATCGCCACTTCGGCACCGGGGGAAGGCGCGGCCTGTCGGAATTGCTGAGCGATCAGGTCGCGCTCG AAGAGGCGATTCGCGAAACGTCGGTGCCGGGGCTGTCGTTCATCCCGAGCGGCGCGCGCCCGCCGAATCCGTCGGAGCTG CTGATGTCGCCGCGCCTGTCGCAATACCTCGACGGCCTCGCGAAGCGCTACGACATGGTGATCGTCGATTCGCCGCCGAT CCTCGCCGTCACCGACGCGACGATCTTCGGCGAACTCGCCGGCTCGACGTTCCTCGTGCTGCGCTCCGGCATGCACACCG AAGGCGAGATCGGCGACGCGATCAAGCGGCTGCGCACCGCGGGCGTGCAACTGCAAGGCGGGATCTTCAACGGCGTGCCG GCGCGCACGCGCGGCTACGGCCGCGGCTATGCGGCCGTGCACGAATATCTGAGCGCATGA
Upstream 100 bases:
>100_bases TTTTCCCGACGATCCAGTCGATTTACTACATGAAGCAGATCACGCGCTGATCGGTCCCGGGCCGCCGCGCGCGGCCCGCC TCAACCTCAAGCGGGAATGC
Downstream 100 bases:
>100_bases CGCGCGCTTGTTCGATCGACGAGGTGACGATGAAAATTTCCGTACTCGTGCCGACCTTCCGGCGCCCCGCGGATCTCGCC CGCTGTCTGATCGCGCTGCA
Product: chain length determinant protein
Products: ADP; protein tyrosine phosphate [C]
Alternate protein names: EPS I polysaccharide export protein epsB [H]
Number of amino acids: Translated: 739; Mature: 739
Protein sequence:
>739_residues MVNTQAKHPYADLAAKTDEEDVVLGQMIQVILDDIWLLLGIALVVVALAGLYCYVAKPLYSADAQVRVEASDNTSQALTQ TQTGAMINSGPPTPPTDAEIEIIKSRGVVAPVVEQFKLNVSVTPNTLPILGAIAARLATPGHPGKPWLGLSSYAWGGEEA SIDSIDVTPALEGKQLTLTAGADGGYALADPDGAVLVRGKVGEREQGGGVTINVSKLVARPGTRFTVVRQNDLDAITAFQ SAIQVAEQGKQTGVIQISLEGKDPEQTAQIANALAQSYLHQHVTSKQAEATKMLEFLKNEEPRLKSDLERAEAELTQYQR TSGSINASDEAKVYLEGSVQYEQQVAAQRLQLAALAQRYTDEHPLVVAAKQQLGQLEAERAKYDGKFRGLPATEVKAVAL QRNAKVAEDIYVLLLNRVQELSVQKAGTGGNIRLVDAALRPGVPVKPKKVLVLSAATLLGLILGTSVVFLRRNLFHGIED PDRVERAFNLPLYGLVPMSAEQARFDAADKGNRVRPILACARPKDLSVESLRSLRTAMQFALMDAKNRVIVLTGPTPGIG KSFLAVNLAALVAHSGKRVLLIDADMRRGSLDRHFGTGGRRGLSELLSDQVALEEAIRETSVPGLSFIPSGARPPNPSEL LMSPRLSQYLDGLAKRYDMVIVDSPPILAVTDATIFGELAGSTFLVLRSGMHTEGEIGDAIKRLRTAGVQLQGGIFNGVP ARTRGYGRGYAAVHEYLSA
Sequences:
>Translated_739_residues MVNTQAKHPYADLAAKTDEEDVVLGQMIQVILDDIWLLLGIALVVVALAGLYCYVAKPLYSADAQVRVEASDNTSQALTQ TQTGAMINSGPPTPPTDAEIEIIKSRGVVAPVVEQFKLNVSVTPNTLPILGAIAARLATPGHPGKPWLGLSSYAWGGEEA SIDSIDVTPALEGKQLTLTAGADGGYALADPDGAVLVRGKVGEREQGGGVTINVSKLVARPGTRFTVVRQNDLDAITAFQ SAIQVAEQGKQTGVIQISLEGKDPEQTAQIANALAQSYLHQHVTSKQAEATKMLEFLKNEEPRLKSDLERAEAELTQYQR TSGSINASDEAKVYLEGSVQYEQQVAAQRLQLAALAQRYTDEHPLVVAAKQQLGQLEAERAKYDGKFRGLPATEVKAVAL QRNAKVAEDIYVLLLNRVQELSVQKAGTGGNIRLVDAALRPGVPVKPKKVLVLSAATLLGLILGTSVVFLRRNLFHGIED PDRVERAFNLPLYGLVPMSAEQARFDAADKGNRVRPILACARPKDLSVESLRSLRTAMQFALMDAKNRVIVLTGPTPGIG KSFLAVNLAALVAHSGKRVLLIDADMRRGSLDRHFGTGGRRGLSELLSDQVALEEAIRETSVPGLSFIPSGARPPNPSEL LMSPRLSQYLDGLAKRYDMVIVDSPPILAVTDATIFGELAGSTFLVLRSGMHTEGEIGDAIKRLRTAGVQLQGGIFNGVP ARTRGYGRGYAAVHEYLSA >Mature_739_residues MVNTQAKHPYADLAAKTDEEDVVLGQMIQVILDDIWLLLGIALVVVALAGLYCYVAKPLYSADAQVRVEASDNTSQALTQ TQTGAMINSGPPTPPTDAEIEIIKSRGVVAPVVEQFKLNVSVTPNTLPILGAIAARLATPGHPGKPWLGLSSYAWGGEEA SIDSIDVTPALEGKQLTLTAGADGGYALADPDGAVLVRGKVGEREQGGGVTINVSKLVARPGTRFTVVRQNDLDAITAFQ SAIQVAEQGKQTGVIQISLEGKDPEQTAQIANALAQSYLHQHVTSKQAEATKMLEFLKNEEPRLKSDLERAEAELTQYQR TSGSINASDEAKVYLEGSVQYEQQVAAQRLQLAALAQRYTDEHPLVVAAKQQLGQLEAERAKYDGKFRGLPATEVKAVAL QRNAKVAEDIYVLLLNRVQELSVQKAGTGGNIRLVDAALRPGVPVKPKKVLVLSAATLLGLILGTSVVFLRRNLFHGIED PDRVERAFNLPLYGLVPMSAEQARFDAADKGNRVRPILACARPKDLSVESLRSLRTAMQFALMDAKNRVIVLTGPTPGIG KSFLAVNLAALVAHSGKRVLLIDADMRRGSLDRHFGTGGRRGLSELLSDQVALEEAIRETSVPGLSFIPSGARPPNPSEL LMSPRLSQYLDGLAKRYDMVIVDSPPILAVTDATIFGELAGSTFLVLRSGMHTEGEIGDAIKRLRTAGVQLQGGIFNGVP ARTRGYGRGYAAVHEYLSA
Specific function: Probably involved in polymerization and/or export of exopolysaccharide EPS I which functions as a virulence factor. May be involved in an ATP-dependent process in the pathway for EPS I production, possibly export of the trimeric repeat units across the in
COG id: COG3206
COG function: function code M; Uncharacterized protein involved in exopolysaccharide biosynthesis
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the etk/wzc family [H]
Homologues:
Organism=Escherichia coli, GI87082032, Length=729, Percent_Identity=35.3909465020576, Blast_Score=442, Evalue=1e-125, Organism=Escherichia coli, GI1787216, Length=726, Percent_Identity=33.0578512396694, Blast_Score=416, Evalue=1e-117,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 - InterPro: IPR005702 - InterPro: IPR005700 - InterPro: IPR003856 [H]
Pfam domain/function: PF01656 CbiA; PF02706 Wzz [H]
EC number: 2.7.1.112 [C]
Molecular weight: Translated: 79205; Mature: 79205
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNTQAKHPYADLAAKTDEEDVVLGQMIQVILDDIWLLLGIALVVVALAGLYCYVAKPLY CCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH SADAQVRVEASDNTSQALTQTQTGAMINSGPPTPPTDAEIEIIKSRGVVAPVVEQFKLNV CCCCEEEEEECCCCHHHHHHHHCCCEECCCCCCCCCCCEEEEEECCCCHHHHHHHHEEEE SVTPNTLPILGAIAARLATPGHPGKPWLGLSSYAWGGEEASIDSIDVTPALEGKQLTLTA EECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCEEEEEE GADGGYALADPDGAVLVRGKVGEREQGGGVTINVSKLVARPGTRFTVVRQNDLDAITAFQ CCCCCEEEECCCCCEEEECCCCCCCCCCCEEEEHHHHHCCCCCEEEEEECCCCHHHHHHH SAIQVAEQGKQTGVIQISLEGKDPEQTAQIANALAQSYLHQHVTSKQAEATKMLEFLKNE HHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EPRLKSDLERAEAELTQYQRTSGSINASDEAKVYLEGSVQYEQQVAAQRLQLAALAQRYT CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHC DEHPLVVAAKQQLGQLEAERAKYDGKFRGLPATEVKAVALQRNAKVAEDIYVLLLNRVQE CCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH LSVQKAGTGGNIRLVDAALRPGVPVKPKKVLVLSAATLLGLILGTSVVFLRRNLFHGIED HHHHCCCCCCCEEEEEEHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCC PDRVERAFNLPLYGLVPMSAEQARFDAADKGNRVRPILACARPKDLSVESLRSLRTAMQF HHHHHHHHCCCEEEEECCCHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHH ALMDAKNRVIVLTGPTPGIGKSFLAVNLAALVAHSGKRVLLIDADMRRGSLDRHFGTGGR HHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHCCCCHH RGLSELLSDQVALEEAIRETSVPGLSFIPSGARPPNPSELLMSPRLSQYLDGLAKRYDMV HHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHCCCHHHHHHHHHHHCCEE IVDSPPILAVTDATIFGELAGSTFLVLRSGMHTEGEIGDAIKRLRTAGVQLQGGIFNGVP EECCCCEEEEECHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHCCCEEECCCCCCCC ARTRGYGRGYAAVHEYLSA CCCCCCCCCHHHHHHHHCC >Mature Secondary Structure MVNTQAKHPYADLAAKTDEEDVVLGQMIQVILDDIWLLLGIALVVVALAGLYCYVAKPLY CCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH SADAQVRVEASDNTSQALTQTQTGAMINSGPPTPPTDAEIEIIKSRGVVAPVVEQFKLNV CCCCEEEEEECCCCHHHHHHHHCCCEECCCCCCCCCCCEEEEEECCCCHHHHHHHHEEEE SVTPNTLPILGAIAARLATPGHPGKPWLGLSSYAWGGEEASIDSIDVTPALEGKQLTLTA EECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCEEEEEE GADGGYALADPDGAVLVRGKVGEREQGGGVTINVSKLVARPGTRFTVVRQNDLDAITAFQ CCCCCEEEECCCCCEEEECCCCCCCCCCCEEEEHHHHHCCCCCEEEEEECCCCHHHHHHH SAIQVAEQGKQTGVIQISLEGKDPEQTAQIANALAQSYLHQHVTSKQAEATKMLEFLKNE HHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EPRLKSDLERAEAELTQYQRTSGSINASDEAKVYLEGSVQYEQQVAAQRLQLAALAQRYT CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHC DEHPLVVAAKQQLGQLEAERAKYDGKFRGLPATEVKAVALQRNAKVAEDIYVLLLNRVQE CCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH LSVQKAGTGGNIRLVDAALRPGVPVKPKKVLVLSAATLLGLILGTSVVFLRRNLFHGIED HHHHCCCCCCCEEEEEEHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCC PDRVERAFNLPLYGLVPMSAEQARFDAADKGNRVRPILACARPKDLSVESLRSLRTAMQF HHHHHHHHCCCEEEEECCCHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHH ALMDAKNRVIVLTGPTPGIGKSFLAVNLAALVAHSGKRVLLIDADMRRGSLDRHFGTGGR HHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHCCCCHH RGLSELLSDQVALEEAIRETSVPGLSFIPSGARPPNPSELLMSPRLSQYLDGLAKRYDMV HHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHCCCHHHHHHHHHHHCCEE IVDSPPILAVTDATIFGELAGSTFLVLRSGMHTEGEIGDAIKRLRTAGVQLQGGIFNGVP EECCCCEEEEECHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHCCCEEECCCCCCCC ARTRGYGRGYAAVHEYLSA CCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; a protein tyrosine [C]
Specific reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]