Click here to switch to the map view.

The map label for this gene is pchB [H]

Identifier: 126443288

GI number: 126443288

Start: 847129

End: 847434

Strand: Reverse

Name: pchB [H]

Synonym: BURPS668_A0872

Alternate gene names: 126443288

Gene position: 847434-847129 (Counterclockwise)

Preceding gene: 126443306

Following gene: 126442399

Centisome position: 27.1

GC content: 69.93

Gene sequence:

>306_bases
ATGAAGACACCGGACCAATGCACGGGCCTCGCCGACATCCGCGAAGCCATCGACCGCCTCGACGCCGACATCATCGCGGC
GCTCGGCGCGCGCATGCAATACGTGAAGGCCGCCTCGCGCTTCAAGCCGACCGAGGCGAGCATCGCGGCGCCGGAGCGCG
TCGCGGCGATGCTGCCCGACCGGCGCCGCTGGGCCGAGCAGGCCGGGCTCGACGGCGCGTTCGTCGAGACGCTGTATGCG
CAAATCATCGCGTGGTACATCGAACAGCAAACGCGGCATTGGCGCCGCCAGCGGGGGCTCGCATGA

Upstream 100 bases:

>100_bases
TCGACGGCGACCATTTCTATCTGCGCCACGCGTACCCGGCGCTCATCGCGCACATCGCCGGGCAGATCGACCGCTCGCTG
CGCCCACTCAAGGAACACGC

Downstream 100 bases:

>100_bases
GCGCCCGCCTGTCCGCGCTGCTCAATACGTTCGCGCGCGCCGCGCGCCGCGCGGCCGACACGGGCGAGCCCGTGCTCGCC
GCGGCATCGTTTCCGCTGCG

Product: isochorismate-pyruvate lyase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MKTPDQCTGLADIREAIDRLDADIIAALGARMQYVKAASRFKPTEASIAAPERVAAMLPDRRRWAEQAGLDGAFVETLYA
QIIAWYIEQQTRHWRRQRGLA

Sequences:

>Translated_101_residues
MKTPDQCTGLADIREAIDRLDADIIAALGARMQYVKAASRFKPTEASIAAPERVAAMLPDRRRWAEQAGLDGAFVETLYA
QIIAWYIEQQTRHWRRQRGLA
>Mature_101_residues
MKTPDQCTGLADIREAIDRLDADIIAALGARMQYVKAASRFKPTEASIAAPERVAAMLPDRRRWAEQAGLDGAFVETLYA
QIIAWYIEQQTRHWRRQRGLA

Specific function: Has isochorismate-pyruvate lyase activity. Probably involved in the conversion of isochorismate to salicylate and pyruvate [H]

COG id: COG1605

COG function: function code E; Chorismate mutase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 chorismate mutase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002701
- InterPro:   IPR020822
- InterPro:   IPR008241 [H]

Pfam domain/function: PF01817 CM_2 [H]

EC number: NA

Molecular weight: Translated: 11429; Mature: 11429

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTPDQCTGLADIREAIDRLDADIIAALGARMQYVKAASRFKPTEASIAAPERVAAMLPD
CCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHCCH
RRRWAEQAGLDGAFVETLYAQIIAWYIEQQTRHWRRQRGLA
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKTPDQCTGLADIREAIDRLDADIIAALGARMQYVKAASRFKPTEASIAAPERVAAMLPD
CCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHCCH
RRRWAEQAGLDGAFVETLYAQIIAWYIEQQTRHWRRQRGLA
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7500944; 10984043 [H]