| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
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The map label for this gene is 126443086
Identifier: 126443086
GI number: 126443086
Start: 2190394
End: 2190993
Strand: Reverse
Name: 126443086
Synonym: BURPS668_A2258
Alternate gene names: NA
Gene position: 2190993-2190394 (Counterclockwise)
Preceding gene: 126444612
Following gene: 126443441
Centisome position: 70.06
GC content: 73.83
Gene sequence:
>600_bases ATGATGCACGGCGCCACGGTCGCCGCGGCCGCGTTCATCGCGTTCGCGCTTTTTGCAACCGATTGCGCGGCGAGCGGTCC GCCCGCCGGCACCGATCCGGCACCGGGCGGCGCATTCGCCGAGCGTTTCGATCACGCGCCGCTGACGGCGCCGCGCGTCG ACGTGGTTCGCGCGCCGCAGAAGGCGGCGCCGGCGGGGGCCAGCCGCGCCGCGGACACGGTGCCCGCGGCGCAGCCGCCG GCCGGCGCGGCGGCGACGGCCGGGCAGCCGCCGGTCGCGGACATGCCGGTCGCGGACATGCCGGCTGCGGACATGCCGGC CGCGGACGTACCCTTTCGAACCCTGCCCGCATGGGACGTGCGCGTCTCCGACGGCACGATTCGCGGGGTGTTGTCGCGAT GGGCGAACACGGCGGGCTGGCAGCTCGTCTGGGACGCGCCCGTCGATTTCAGCATCGATGCGCAGGCGACGCTGCGCGGC TCGTTCGAGGATGCGCTGCAGGCGCTCGTCGCGAGCCTCGGCCGAACGTCGACGCCGATCCAGGCGATTCTCTATCGAGG CAATCACGTGTTGCGCGTCGTCGCGCAAGGAGCGGGCTGA
Upstream 100 bases:
>100_bases CGAAGGCAGTCCGACGCGTCGGACGCGGCATCGGGATGCGTCGGGCGGCGAAGCGCGGGGGCCAGCGGCGCACGGCAGCA GTCGAGTAACGAGGAAAATC
Downstream 100 bases:
>100_bases TGCGCGTGCTGTTCGCCATTTCATTGCTGGCCGTCGCATGGCTCGCCGGTTGCACCGGCCTTCGCGGCGGCATCGAGCGC GACGCGCGGCGCGATTCGAA
Product: PilL domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MMHGATVAAAAFIAFALFATDCAASGPPAGTDPAPGGAFAERFDHAPLTAPRVDVVRAPQKAAPAGASRAADTVPAAQPP AGAAATAGQPPVADMPVADMPAADMPAADVPFRTLPAWDVRVSDGTIRGVLSRWANTAGWQLVWDAPVDFSIDAQATLRG SFEDALQALVASLGRTSTPIQAILYRGNHVLRVVAQGAG
Sequences:
>Translated_199_residues MMHGATVAAAAFIAFALFATDCAASGPPAGTDPAPGGAFAERFDHAPLTAPRVDVVRAPQKAAPAGASRAADTVPAAQPP AGAAATAGQPPVADMPVADMPAADMPAADVPFRTLPAWDVRVSDGTIRGVLSRWANTAGWQLVWDAPVDFSIDAQATLRG SFEDALQALVASLGRTSTPIQAILYRGNHVLRVVAQGAG >Mature_199_residues MMHGATVAAAAFIAFALFATDCAASGPPAGTDPAPGGAFAERFDHAPLTAPRVDVVRAPQKAAPAGASRAADTVPAAQPP AGAAATAGQPPVADMPVADMPAADMPAADVPFRTLPAWDVRVSDGTIRGVLSRWANTAGWQLVWDAPVDFSIDAQATLRG SFEDALQALVASLGRTSTPIQAILYRGNHVLRVVAQGAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20187; Mature: 20187
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMHGATVAAAAFIAFALFATDCAASGPPAGTDPAPGGAFAERFDHAPLTAPRVDVVRAPQ CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHCCCH KAAPAGASRAADTVPAAQPPAGAAATAGQPPVADMPVADMPAADMPAADVPFRTLPAWDV HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE RVSDGTIRGVLSRWANTAGWQLVWDAPVDFSIDAQATLRGSFEDALQALVASLGRTSTPI EECCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCH QAILYRGNHVLRVVAQGAG HHHHHCCCEEEEEEECCCC >Mature Secondary Structure MMHGATVAAAAFIAFALFATDCAASGPPAGTDPAPGGAFAERFDHAPLTAPRVDVVRAPQ CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHCCCH KAAPAGASRAADTVPAAQPPAGAAATAGQPPVADMPVADMPAADMPAADVPFRTLPAWDV HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE RVSDGTIRGVLSRWANTAGWQLVWDAPVDFSIDAQATLRGSFEDALQALVASLGRTSTPI EECCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCH QAILYRGNHVLRVVAQGAG HHHHHCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA