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The map label for this gene is dapA [H]

Identifier: 126442723

GI number: 126442723

Start: 536053

End: 536973

Strand: Reverse

Name: dapA [H]

Synonym: BURPS668_A0568

Alternate gene names: 126442723

Gene position: 536973-536053 (Counterclockwise)

Preceding gene: 126444880

Following gene: 126443431

Centisome position: 17.17

GC content: 68.51

Gene sequence:

>921_bases
GTGAGCCGTCACGCGATTCAATGGAGCGGGGTCTTCCCCGCCGTCAGCACCCAGTTCAAGCCGGATTTCTCCCTCGATGT
CGACGCGACGCACCGCGTCGTGAAGAACCTGGTGAACGACGGCGTGTCGGGCCTCGTCGTCTGCGGCACGGTGGGCGAGA
ACACGTCGCTCGGCACGGCCGAGAAGCTCGCGGTGATCGAAGCGGCGCGCGACGCGGCGGGCGGCAAGGTGCCCGTGATC
GCCGGCGTCGCGGAGTTCACGACCGAGTTCGCGCGCAACACCGTGCGCGAGGCGCAGCGCGTGGGCGTGGACGGCGTGAT
GGTGATGCCCGCGCTCGTCTACTCCGCGAAGCCGCACGAGACGGCCGCGCACTTTCGCGCGGTCGCGTCGAGCACCGATC
TGCCGGTGATGGTCTACAACAACCCGCCGATCTACAGGAACGACGTGACGCCCGACGTGCTGATCGCGCTGCAGGACTGC
GAGAACATCGTCTGCTTCAAGGATTCGTCGGGCGACACGCGCCGCTTCGTCGACCTGCGCAACGCGGTCGGCGATCGCTT
CGTGCTGTTCGCGGGCCTCGACGACGTCGTCGTCGAGAGCATCGCCGTTGGCGCGCAGGGCTGGGTGTCCGGCATGTCCA
ACGCGTTCCCGAAGGAAGGCGAGACGCTGTTTCGCCTCGCGAAGCAAAAGCGCTTCGACGAGGCGCTCGCGCTGTATCGC
TGGTTCATGCCGCTCCTGCACCTCGATGCGCGCCCGGACCTCGTCCAGTGCATCAAGCTGTGCGAGGAGCTCGTCGGCCG
CGGCAGCGCGCTCACGCGCCCGCCGCGCCTCGCGCTGCAAGGCGACACGCTGGCGCACGTGAAGGCGATCGTCGCGAAGG
CGCTCGAAACGCGTCCGACGCTGCCCGACGTCGGCCTTTGA

Upstream 100 bases:

>100_bases
CGGTTGGAAAAGGCTCAAGCCTCGCGGCGCGCCGACGGCGATACTGGTTCACGCACCGACGCCCCCGTCGGCCATCTCAT
TCGAACGTAGGAGATACTCA

Downstream 100 bases:

>100_bases
GCGACGCGGATGCGGCGCGCGGCGGGGATTCCGGCGCCGGCTTGAGCCCCGGCCCGGCTCGGGCGACGTGCGCGGCGCGG
AACGCGCCGGTATGCGCCCG

Product: dihydrodipicolinate synthetase

Products: NA

Alternate protein names: DHDPS [H]

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MSRHAIQWSGVFPAVSTQFKPDFSLDVDATHRVVKNLVNDGVSGLVVCGTVGENTSLGTAEKLAVIEAARDAAGGKVPVI
AGVAEFTTEFARNTVREAQRVGVDGVMVMPALVYSAKPHETAAHFRAVASSTDLPVMVYNNPPIYRNDVTPDVLIALQDC
ENIVCFKDSSGDTRRFVDLRNAVGDRFVLFAGLDDVVVESIAVGAQGWVSGMSNAFPKEGETLFRLAKQKRFDEALALYR
WFMPLLHLDARPDLVQCIKLCEELVGRGSALTRPPRLALQGDTLAHVKAIVAKALETRPTLPDVGL

Sequences:

>Translated_306_residues
MSRHAIQWSGVFPAVSTQFKPDFSLDVDATHRVVKNLVNDGVSGLVVCGTVGENTSLGTAEKLAVIEAARDAAGGKVPVI
AGVAEFTTEFARNTVREAQRVGVDGVMVMPALVYSAKPHETAAHFRAVASSTDLPVMVYNNPPIYRNDVTPDVLIALQDC
ENIVCFKDSSGDTRRFVDLRNAVGDRFVLFAGLDDVVVESIAVGAQGWVSGMSNAFPKEGETLFRLAKQKRFDEALALYR
WFMPLLHLDARPDLVQCIKLCEELVGRGSALTRPPRLALQGDTLAHVKAIVAKALETRPTLPDVGL
>Mature_305_residues
SRHAIQWSGVFPAVSTQFKPDFSLDVDATHRVVKNLVNDGVSGLVVCGTVGENTSLGTAEKLAVIEAARDAAGGKVPVIA
GVAEFTTEFARNTVREAQRVGVDGVMVMPALVYSAKPHETAAHFRAVASSTDLPVMVYNNPPIYRNDVTPDVLIALQDCE
NIVCFKDSSGDTRRFVDLRNAVGDRFVLFAGLDDVVVESIAVGAQGWVSGMSNAFPKEGETLFRLAKQKRFDEALALYRW
FMPLLHLDARPDLVQCIKLCEELVGRGSALTRPPRLALQGDTLAHVKAIVAKALETRPTLPDVGL

Specific function: Unknown

COG id: COG0329

COG function: function code EM; Dihydrodipicolinate synthase/N-acetylneuraminate lyase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DHDPS family [H]

Homologues:

Organism=Homo sapiens, GI31543060, Length=234, Percent_Identity=29.4871794871795, Blast_Score=79, Evalue=4e-15,
Organism=Escherichia coli, GI87082415, Length=266, Percent_Identity=31.203007518797, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI1786463, Length=266, Percent_Identity=28.1954887218045, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1788823, Length=260, Percent_Identity=27.3076923076923, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1789620, Length=211, Percent_Identity=29.3838862559242, Blast_Score=92, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005263
- InterPro:   IPR002220
- InterPro:   IPR020625
- InterPro:   IPR020624 [H]

Pfam domain/function: PF00701 DHDPS [H]

EC number: =4.2.1.52 [H]

Molecular weight: Translated: 33085; Mature: 32954

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRHAIQWSGVFPAVSTQFKPDFSLDVDATHRVVKNLVNDGVSGLVVCGTVGENTSLGTA
CCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHH
EKLAVIEAARDAAGGKVPVIAGVAEFTTEFARNTVREAQRVGVDGVMVMPALVYSAKPHE
HHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCH
TAAHFRAVASSTDLPVMVYNNPPIYRNDVTPDVLIALQDCENIVCFKDSSGDTRRFVDLR
HHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHEEEECCCCCEEEEECCCCCHHHHHHHH
NAVGDRFVLFAGLDDVVVESIAVGAQGWVSGMSNAFPKEGETLFRLAKQKRFDEALALYR
HHCCCEEEEEECCHHHHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
WFMPLLHLDARPDLVQCIKLCEELVGRGSALTRPPRLALQGDTLAHVKAIVAKALETRPT
HHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCC
LPDVGL
CCCCCC
>Mature Secondary Structure 
SRHAIQWSGVFPAVSTQFKPDFSLDVDATHRVVKNLVNDGVSGLVVCGTVGENTSLGTA
CCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHH
EKLAVIEAARDAAGGKVPVIAGVAEFTTEFARNTVREAQRVGVDGVMVMPALVYSAKPHE
HHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCH
TAAHFRAVASSTDLPVMVYNNPPIYRNDVTPDVLIALQDCENIVCFKDSSGDTRRFVDLR
HHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHEEEECCCCCEEEEECCCCCHHHHHHHH
NAVGDRFVLFAGLDDVVVESIAVGAQGWVSGMSNAFPKEGETLFRLAKQKRFDEALALYR
HHCCCEEEEEECCHHHHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
WFMPLLHLDARPDLVQCIKLCEELVGRGSALTRPPRLALQGDTLAHVKAIVAKALETRPT
HHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCC
LPDVGL
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA