| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is 126209485
Identifier: 126209485
GI number: 126209485
Start: 2257942
End: 2258436
Strand: Reverse
Name: 126209485
Synonym: APL_2031
Alternate gene names: NA
Gene position: 2258436-2257942 (Counterclockwise)
Preceding gene: 126209486
Following gene: 126209472
Centisome position: 99.29
GC content: 40.0
Gene sequence:
>495_bases ATGGCACATTTTTATGAATATTTAGAATTTAGCAGTGACGAAGACCGTGAAAATCAGCTTGAAGTTTATGTTGATGTCAA ACTTGAAGCGGAAACCGAAGAAAAACTTAAAGCCGTCGGCGTACAGGGCGACTGGCTGGTGATGGCGGAGCCTTATTGCC CGGACTGTGTGGAAATTGTCGCTTATTTCCAACGTATGACCAAACTCAATCCGAATATCAACGTAAAATACGTTTCACGT AAAGATAACAAAGATCGCAAACATTTTGATAGTGACGAGCAGCAACAAGCGGTTATTTCCGCACAAAAAATTCCAAGTAT TTTTGATATTCGTAACGGCAAAACCGAACTGGTTTTATGTGAATTTCCGCAATTCTTAAAACAGAAAATGGAAGCGGAAC CGGAAAAATTTGATGAATTGAAAGCGGATTTCCGTATGGGTAAATTCGGTAAACAAGTGGAAGCCGAACTGTTAGAAATC CTGACTAAGGCTTAG
Upstream 100 bases:
>100_bases GAGAAAAACTGCAGCGTAAAACGATTAACAATGCCAAAGTAGATTGCGAAATTATTTGGCGACACTAAAACCGATACCGT TAATTTTAAAAGGATAACCT
Downstream 100 bases:
>100_bases TTACATCTCATTGCAAAAACCATAAAAAATCCACCGCTTGTACGGTGGATTTTTTATTTATCACGATTAAACGTTTTTCA TCATGCGAGAAATTCTGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MAHFYEYLEFSSDEDRENQLEVYVDVKLEAETEEKLKAVGVQGDWLVMAEPYCPDCVEIVAYFQRMTKLNPNINVKYVSR KDNKDRKHFDSDEQQQAVISAQKIPSIFDIRNGKTELVLCEFPQFLKQKMEAEPEKFDELKADFRMGKFGKQVEAELLEI LTKA
Sequences:
>Translated_164_residues MAHFYEYLEFSSDEDRENQLEVYVDVKLEAETEEKLKAVGVQGDWLVMAEPYCPDCVEIVAYFQRMTKLNPNINVKYVSR KDNKDRKHFDSDEQQQAVISAQKIPSIFDIRNGKTELVLCEFPQFLKQKMEAEPEKFDELKADFRMGKFGKQVEAELLEI LTKA >Mature_163_residues AHFYEYLEFSSDEDRENQLEVYVDVKLEAETEEKLKAVGVQGDWLVMAEPYCPDCVEIVAYFQRMTKLNPNINVKYVSRK DNKDRKHFDSDEQQQAVISAQKIPSIFDIRNGKTELVLCEFPQFLKQKMEAEPEKFDELKADFRMGKFGKQVEAELLEIL TKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19198; Mature: 19067
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHFYEYLEFSSDEDRENQLEVYVDVKLEAETEEKLKAVGVQGDWLVMAEPYCPDCVEIV CCHHHHHHHCCCCCCCCCEEEEEEEEEECCCHHHHHHHCCCCCCEEEEECCCCCHHHHHH AYFQRMTKLNPNINVKYVSRKDNKDRKHFDSDEQQQAVISAQKIPSIFDIRNGKTELVLC HHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCEEEEE EFPQFLKQKMEAEPEKFDELKADFRMGKFGKQVEAELLEILTKA CCHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC >Mature Secondary Structure AHFYEYLEFSSDEDRENQLEVYVDVKLEAETEEKLKAVGVQGDWLVMAEPYCPDCVEIV CHHHHHHHCCCCCCCCCEEEEEEEEEECCCHHHHHHHCCCCCCEEEEECCCCCHHHHHH AYFQRMTKLNPNINVKYVSRKDNKDRKHFDSDEQQQAVISAQKIPSIFDIRNGKTELVLC HHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCEEEEE EFPQFLKQKMEAEPEKFDELKADFRMGKFGKQVEAELLEILTKA CCHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA