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The map label for this gene is yaaH [H]

Identifier: 126209466

GI number: 126209466

Start: 2237974

End: 2238543

Strand: Reverse

Name: yaaH [H]

Synonym: APL_2012

Alternate gene names: 126209466

Gene position: 2238543-2237974 (Counterclockwise)

Preceding gene: 126209472

Following gene: 126209465

Centisome position: 98.42

GC content: 46.32

Gene sequence:

>570_bases
ATGTCAAATCATAACGCTTTAACAGCTAATCCGGGCCCACTAGGTTTATGCGGTTTCGCCTTAACCACTTGGTTACTTAG
CTTAATCAATAACGGCACCTTCGGTGGCGAAAACGTAGGCTTAGTACTTGCCATGGGATTTGCTTTCGGCGGTACGGCAC
AAATGATTGCAGGTATGTTCGAATTTTCAAAAGGTAATACGTTCGGTTTTACCGCATTTACCAGCTACGGCGCATTTTGG
TGGTCATTCGCATTATTCAAAGTGTTCTTCGCTGAAGGCGTAACCGCACCGTTTATCGGTTGGTATTTAGTGGCTTGGGG
CACGTTCACGTTAATGATGTTTATCGGCACCTTAGCCAAAGCACGCGCATTACAGGCAATCTTCTTGAGCTTGACCGTCA
CTTTCTACTTATTAGCGGCGGGCGATTTCACCGGAGATCACTCAATCACGCATATCGGCGGTAACTTCGGTTTATTAACC
GCATTATTAGCGTTCTACTTAGCGGCGGCGGAAATCATTAATGAGAGCTTCGGCCGTACGGTATTACCAATCGGTGCACC
GAAACAATAA

Upstream 100 bases:

>100_bases
ATTTTAACATCAAGTTATAGCAACCCATTTAAGTTATCTATATAATCCTGCGCTTTTGCAATATACACATTTTTTATTCA
ATTACGACTCGAGGTTTTCA

Downstream 100 bases:

>100_bases
AATATGTTTATCTCGATAAGGACGCTACTGCGTCCTTATTTTTTGCCGATTTTCTCGAAAATCAAACCGCTTGTTTTGAG
ATCCAGCTCACATTTTTCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MSNHNALTANPGPLGLCGFALTTWLLSLINNGTFGGENVGLVLAMGFAFGGTAQMIAGMFEFSKGNTFGFTAFTSYGAFW
WSFALFKVFFAEGVTAPFIGWYLVAWGTFTLMMFIGTLAKARALQAIFLSLTVTFYLLAAGDFTGDHSITHIGGNFGLLT
ALLAFYLAAAEIINESFGRTVLPIGAPKQ

Sequences:

>Translated_189_residues
MSNHNALTANPGPLGLCGFALTTWLLSLINNGTFGGENVGLVLAMGFAFGGTAQMIAGMFEFSKGNTFGFTAFTSYGAFW
WSFALFKVFFAEGVTAPFIGWYLVAWGTFTLMMFIGTLAKARALQAIFLSLTVTFYLLAAGDFTGDHSITHIGGNFGLLT
ALLAFYLAAAEIINESFGRTVLPIGAPKQ
>Mature_188_residues
SNHNALTANPGPLGLCGFALTTWLLSLINNGTFGGENVGLVLAMGFAFGGTAQMIAGMFEFSKGNTFGFTAFTSYGAFWW
SFALFKVFFAEGVTAPFIGWYLVAWGTFTLMMFIGTLAKARALQAIFLSLTVTFYLLAAGDFTGDHSITHIGGNFGLLTA
LLAFYLAAAEIINESFGRTVLPIGAPKQ

Specific function: Unknown

COG id: COG1584

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GPR1/FUN34/yaaH family [H]

Homologues:

Organism=Escherichia coli, GI1786191, Length=185, Percent_Identity=52.4324324324324, Blast_Score=168, Evalue=2e-43,
Organism=Saccharomyces cerevisiae, GI6324329, Length=173, Percent_Identity=39.3063583815029, Blast_Score=100, Evalue=2e-22,
Organism=Saccharomyces cerevisiae, GI6319855, Length=173, Percent_Identity=37.5722543352601, Blast_Score=80, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6320592, Length=176, Percent_Identity=32.9545454545455, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000791 [H]

Pfam domain/function: PF01184 Grp1_Fun34_YaaH [H]

EC number: NA

Molecular weight: Translated: 20148; Mature: 20016

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: PS00599 AA_TRANSFER_CLASS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNHNALTANPGPLGLCGFALTTWLLSLINNGTFGGENVGLVLAMGFAFGGTAQMIAGMF
CCCCCCEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHEEEHHHCCCHHHHHHHHH
EFSKGNTFGFTAFTSYGAFWWSFALFKVFFAEGVTAPFIGWYLVAWGTFTLMMFIGTLAK
HHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ARALQAIFLSLTVTFYLLAAGDFTGDHSITHIGGNFGLLTALLAFYLAAAEIINESFGRT
HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCE
VLPIGAPKQ
EECCCCCCC
>Mature Secondary Structure 
SNHNALTANPGPLGLCGFALTTWLLSLINNGTFGGENVGLVLAMGFAFGGTAQMIAGMF
CCCCCEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHEEEHHHCCCHHHHHHHHH
EFSKGNTFGFTAFTSYGAFWWSFALFKVFFAEGVTAPFIGWYLVAWGTFTLMMFIGTLAK
HHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ARALQAIFLSLTVTFYLLAAGDFTGDHSITHIGGNFGLLTALLAFYLAAAEIINESFGRT
HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCE
VLPIGAPKQ
EECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]