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The map label for this gene is icc [H]

Identifier: 126209400

GI number: 126209400

Start: 2174466

End: 2175293

Strand: Reverse

Name: icc [H]

Synonym: APL_1942

Alternate gene names: 126209400

Gene position: 2175293-2174466 (Counterclockwise)

Preceding gene: 126209401

Following gene: 126209399

Centisome position: 95.64

GC content: 42.63

Gene sequence:

>828_bases
ATGAGCAGCTTTTATTCGCTTGGAAAAAAAGAACCGGTCGTTCGATTATTGCAAATCACCGATCCGCATCTTTTTACCTC
GGAAAGTGAAACGTTACTCGGGGTAAACACAACCGACAGTTTTCAAGCCATACTGGATCAAATTCGGCAAAGCGAATTTG
AGTACGACTTAGTCTTAGCCACCGGTGATCTGATTCAAGATCATAATCCGGAGGCTTATCATCGTTTCGCCCAAATGGTC
AAACCGTTGGCAAAGCCGATTTTCTGGTTGGAAGGAAATCATGACTTGCAACCGCATATGGGATTATATCTGGCAAAGTA
TCCGCATATTTCTCCGGCAAAACATATTCTGGCCGGCGAAAAATGGCAAATTATTTTGCTTAACAGTCAGATTGCCGGTG
CGGCAAGCGGACATCTTTCATTCGGACAATTATCATGGTTGGACAAAAAACTCGCCGAATATCCGGATCGTTATTCATTG
GTCGTCCTACATCATAATATTTTATCGACCCGTTCCGCATGGCTTGATCAACATTGTCTGAATAACAGCGAGCAATTGGC
TGAGGTTTTACGGCATTATCCGAACGTAAGAGCGATTTTACACGGACATATTCATCAAGAAGTGGATGATATTTGGCAGA
ATTACCGAATTTTCGCTACCCCTTCGACCTGTATCCAATTCAAACCGAATTGTGATGACTTTACCTTAGACTTGCTTCCG
CAAGGTTGGCGAGAGCTGAATTTATTTGATGACGGACATATCGAAACGCAAGTGAAGCGGTTAAATTCCAACGAATTTTT
ACCGGACTTTAAATCGAAAGGTTACTGA

Upstream 100 bases:

>100_bases
CGCTCATTTTTAACGTTAAGTAGCTGATAAACTTATAAATAAAGTAGTAAAGTGCTCAACTAAAAGGAATATAAAGTGCC
CGCATAAACAAGGAGGAATC

Downstream 100 bases:

>100_bases
TTCTAACGTGATTAATGAAAATGGCTAGGTAAAAACCTAGCGCATTTTAAAACGTAATGAATAAATTTTTAAAGTGTGTC
CGAAAACACCTAAATATAGA

Product: cyclic 3',5'-adenosine monophosphate phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 274

Protein sequence:

>275_residues
MSSFYSLGKKEPVVRLLQITDPHLFTSESETLLGVNTTDSFQAILDQIRQSEFEYDLVLATGDLIQDHNPEAYHRFAQMV
KPLAKPIFWLEGNHDLQPHMGLYLAKYPHISPAKHILAGEKWQIILLNSQIAGAASGHLSFGQLSWLDKKLAEYPDRYSL
VVLHHNILSTRSAWLDQHCLNNSEQLAEVLRHYPNVRAILHGHIHQEVDDIWQNYRIFATPSTCIQFKPNCDDFTLDLLP
QGWRELNLFDDGHIETQVKRLNSNEFLPDFKSKGY

Sequences:

>Translated_275_residues
MSSFYSLGKKEPVVRLLQITDPHLFTSESETLLGVNTTDSFQAILDQIRQSEFEYDLVLATGDLIQDHNPEAYHRFAQMV
KPLAKPIFWLEGNHDLQPHMGLYLAKYPHISPAKHILAGEKWQIILLNSQIAGAASGHLSFGQLSWLDKKLAEYPDRYSL
VVLHHNILSTRSAWLDQHCLNNSEQLAEVLRHYPNVRAILHGHIHQEVDDIWQNYRIFATPSTCIQFKPNCDDFTLDLLP
QGWRELNLFDDGHIETQVKRLNSNEFLPDFKSKGY
>Mature_274_residues
SSFYSLGKKEPVVRLLQITDPHLFTSESETLLGVNTTDSFQAILDQIRQSEFEYDLVLATGDLIQDHNPEAYHRFAQMVK
PLAKPIFWLEGNHDLQPHMGLYLAKYPHISPAKHILAGEKWQIILLNSQIAGAASGHLSFGQLSWLDKKLAEYPDRYSLV
VLHHNILSTRSAWLDQHCLNNSEQLAEVLRHYPNVRAILHGHIHQEVDDIWQNYRIFATPSTCIQFKPNCDDFTLDLLPQ
GWRELNLFDDGHIETQVKRLNSNEFLPDFKSKGY

Specific function: Affects The Expression Of The Lacz Gene. [C]

COG id: COG1409

COG function: function code R; Predicted phosphohydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli icc [H]

Homologues:

Organism=Escherichia coli, GI1789410, Length=265, Percent_Identity=50.9433962264151, Blast_Score=263, Evalue=1e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013622
- InterPro:   IPR004843
- ProDom:   PD587589 [H]

Pfam domain/function: PF00149 Metallophos; PF08413 Metallophos_C [H]

EC number: NA

Molecular weight: Translated: 31682; Mature: 31551

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSFYSLGKKEPVVRLLQITDPHLFTSESETLLGVNTTDSFQAILDQIRQSEFEYDLVLA
CCCHHHCCCCCHHHEEEEECCCCEECCCCCEEEECCCCHHHHHHHHHHHHCCCCEEEEEE
TGDLIQDHNPEAYHRFAQMVKPLAKPIFWLEGNHDLQPHMGLYLAKYPHISPAKHILAGE
ECCHHHCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCEEEECCCCCCHHHHHHCCC
KWQIILLNSQIAGAASGHLSFGQLSWLDKKLAEYPDRYSLVVLHHNILSTRSAWLDQHCL
CEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHC
NNSEQLAEVLRHYPNVRAILHGHIHQEVDDIWQNYRIFATPSTCIQFKPNCDDFTLDLLP
CCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHCCEEEECCCCEEEECCCCCCEEEECCC
QGWRELNLFDDGHIETQVKRLNSNEFLPDFKSKGY
CCHHEECCCCCCCHHHHHHHCCCCCCCCCHHCCCC
>Mature Secondary Structure 
SSFYSLGKKEPVVRLLQITDPHLFTSESETLLGVNTTDSFQAILDQIRQSEFEYDLVLA
CCHHHCCCCCHHHEEEEECCCCEECCCCCEEEECCCCHHHHHHHHHHHHCCCCEEEEEE
TGDLIQDHNPEAYHRFAQMVKPLAKPIFWLEGNHDLQPHMGLYLAKYPHISPAKHILAGE
ECCHHHCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCEEEECCCCCCHHHHHHCCC
KWQIILLNSQIAGAASGHLSFGQLSWLDKKLAEYPDRYSLVVLHHNILSTRSAWLDQHCL
CEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHC
NNSEQLAEVLRHYPNVRAILHGHIHQEVDDIWQNYRIFATPSTCIQFKPNCDDFTLDLLP
CCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHCCEEEECCCCEEEECCCCCCEEEECCC
QGWRELNLFDDGHIETQVKRLNSNEFLPDFKSKGY
CCHHEECCCCCCCHHHHHHHCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]