Definition Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome.
Accession NC_009053
Length 2,274,482

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The map label for this gene is 126209356

Identifier: 126209356

GI number: 126209356

Start: 2127357

End: 2128148

Strand: Reverse

Name: 126209356

Synonym: APL_1896

Alternate gene names: NA

Gene position: 2128148-2127357 (Counterclockwise)

Preceding gene: 126209357

Following gene: 126209355

Centisome position: 93.57

GC content: 44.44

Gene sequence:

>792_bases
ATGATAGAAGTATTTTTGAGTTGTCTTGTCGTAGGTTCGGCGGTCGGCTTCTTAGCCGGTTTATTCGGTATCGGCGGCGG
TTTGATCATCGTACCGAGTTTGGTTTATTTATTACCCTTAGCCGGTGTAACACCGGAGAATTTAATGGCGGCTGCACTCG
GTACTTCGTTTTCAACCATTGTGGTAACCGCCTTTTCATCGGCGCAACGTCATCACAAATTAGGTAATGTGGATGTACTA
GTCAGTAAATATTTCATTCCCGCTTTAATGGTATCGGTCTTCCTTGCAGGCTTAGCGGTAAGCAATTTGGATGCGAAATT
GATGTCGAAGATTTTTGCGGTAATGGTGCTGTATTTAGCGGCGAGAATGTTGTTTTCCTTGAAAAAAACGCCTGAAATTA
AACCGCTTACCACGCAATTTACTATTGTCGCCGGCGGCGTAATCGGTGCCTTATCCAGTATGGCGGGGATTGCCGGCGGT
GCTTTTATCGTGCCGTTTCTAAATAGCCGAGGGTTAGAAATGAAACGTGCTATCGGCACTTCATCATTTTGTGGGGCGTT
TTTAGGTTTATCCGGTACGATTAGTTTTATCGCAAGCGGTTGGAATGTAGAAACGATGCCGGACTACTCTTTAGGTTATG
TCTATTTACCGGCGTTATTAGGTATAACCTTAACCTCTTATTTTACCTCTAAGCTTGGGGCGAATGCGGCGAATGTCTTA
CCGGTCGCGACCTTGAAAAAAGCCTTTGCGGTGATGTTGGTTGCGATAGCGATTAATATGTTTGTAAAATAA

Upstream 100 bases:

>100_bases
GTACGGAAAAGCGCGATTTTCAAAAACGTGATAATCAAAAACGCGAATTTCGCAAATCTGCTCGTATGTGGAACAATTCG
CATCAGAAAGGAAAAGCGCA

Downstream 100 bases:

>100_bases
TGCGACGTTTGCTCCCCTCTGTATCAGAGGGGAATTTTTTTAAAGGAATAATATGAACGAACAATTTATTCAATTTCCAC
AAATTGACCCGATTATTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MIEVFLSCLVVGSAVGFLAGLFGIGGGLIIVPSLVYLLPLAGVTPENLMAAALGTSFSTIVVTAFSSAQRHHKLGNVDVL
VSKYFIPALMVSVFLAGLAVSNLDAKLMSKIFAVMVLYLAARMLFSLKKTPEIKPLTTQFTIVAGGVIGALSSMAGIAGG
AFIVPFLNSRGLEMKRAIGTSSFCGAFLGLSGTISFIASGWNVETMPDYSLGYVYLPALLGITLTSYFTSKLGANAANVL
PVATLKKAFAVMLVAIAINMFVK

Sequences:

>Translated_263_residues
MIEVFLSCLVVGSAVGFLAGLFGIGGGLIIVPSLVYLLPLAGVTPENLMAAALGTSFSTIVVTAFSSAQRHHKLGNVDVL
VSKYFIPALMVSVFLAGLAVSNLDAKLMSKIFAVMVLYLAARMLFSLKKTPEIKPLTTQFTIVAGGVIGALSSMAGIAGG
AFIVPFLNSRGLEMKRAIGTSSFCGAFLGLSGTISFIASGWNVETMPDYSLGYVYLPALLGITLTSYFTSKLGANAANVL
PVATLKKAFAVMLVAIAINMFVK
>Mature_263_residues
MIEVFLSCLVVGSAVGFLAGLFGIGGGLIIVPSLVYLLPLAGVTPENLMAAALGTSFSTIVVTAFSSAQRHHKLGNVDVL
VSKYFIPALMVSVFLAGLAVSNLDAKLMSKIFAVMVLYLAARMLFSLKKTPEIKPLTTQFTIVAGGVIGALSSMAGIAGG
AFIVPFLNSRGLEMKRAIGTSSFCGAFLGLSGTISFIASGWNVETMPDYSLGYVYLPALLGITLTSYFTSKLGANAANVL
PVATLKKAFAVMLVAIAINMFVK

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 27391; Mature: 27391

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIEVFLSCLVVGSAVGFLAGLFGIGGGLIIVPSLVYLLPLAGVTPENLMAAALGTSFSTI
CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHH
VVTAFSSAQRHHKLGNVDVLVSKYFIPALMVSVFLAGLAVSNLDAKLMSKIFAVMVLYLA
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
ARMLFSLKKTPEIKPLTTQFTIVAGGVIGALSSMAGIAGGAFIVPFLNSRGLEMKRAIGT
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHCC
SSFCGAFLGLSGTISFIASGWNVETMPDYSLGYVYLPALLGITLTSYFTSKLGANAANVL
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
PVATLKKAFAVMLVAIAINMFVK
HHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]