| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is 126209337
Identifier: 126209337
GI number: 126209337
Start: 2103986
End: 2104696
Strand: Direct
Name: 126209337
Synonym: APL_1875
Alternate gene names: NA
Gene position: 2103986-2104696 (Clockwise)
Preceding gene: 126209330
Following gene: 126209340
Centisome position: 92.5
GC content: 39.94
Gene sequence:
>711_bases ATGAAAAAACTTACTTTTAAAAGTATAACATTAGCCTTAACGTTGATGTTGGCGGCCTGCGGCAGTCATAAGGATACGAA TGTATCCGGCTTATCCGAGCCGGAGTATAAAATCTCGGATGCGGATATGAATAAGTGGATCATTGAAAAAAATAAAGTGG AGCAGTGCTTATTCCCTAGAAAAGGATCCGCTAAAAATTCCAAATTGTCGGAGTCTAATCGTTTTGTTTATCAAATGGCG GCTTACAATAGAACCCTTAGTCAGATTATTGGTGAAGACGATTATCAAACGCTGATGCAAGACCCTGCATCTCAGCAATA TTTAGCGGAAAGACTGGCGAAGTTAGGTCATTCTAAAAGTGTAAAAATTGAGAAGAAATGGTGTAACGAGCTGAGAGCGG ATTACCAAAAATTTAATAAGGCAACGAAAACGGCAAAGTCCGCCGCAAAGAAAGCTACAGGGAAGTCTAAACAAGCTAAA AAGACGGTAAATAAAAAATCACAGAAAGTAGCGAGAAAAGAGGCGGAAGAAAAAGACATACCGTATATCGGCGGTATTAA TGAAAGGGTGCAAGATACTTCCAGTATGAAAACCTCTTCCCAAGGCAGAGCGAATACGGCGGAAGATAATTCCTATCAAG AACCGAAAGCACCGAACGGTCGCATTAAAGTCAATTGGGATCCGGTAAAAAACGAAGTATATTCTTACTAA
Upstream 100 bases:
>100_bases GGGTTATTAGCCAAATAATGTTTATTAATTAGAAAAATTTATAATCGATAGCCGTGTTTATTTGTATAATTTACGGAATA TTTTTTTAGGTATTACTTAA
Downstream 100 bases:
>100_bases ATACGTAACAAAAAAGAGATGTGAATATTAACTCACATCTCTTTTTTTATTTATTCGCATTCCGCTACCGCTTGCCATAC TTTCAGCATATCGGCGGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MKKLTFKSITLALTLMLAACGSHKDTNVSGLSEPEYKISDADMNKWIIEKNKVEQCLFPRKGSAKNSKLSESNRFVYQMA AYNRTLSQIIGEDDYQTLMQDPASQQYLAERLAKLGHSKSVKIEKKWCNELRADYQKFNKATKTAKSAAKKATGKSKQAK KTVNKKSQKVARKEAEEKDIPYIGGINERVQDTSSMKTSSQGRANTAEDNSYQEPKAPNGRIKVNWDPVKNEVYSY
Sequences:
>Translated_236_residues MKKLTFKSITLALTLMLAACGSHKDTNVSGLSEPEYKISDADMNKWIIEKNKVEQCLFPRKGSAKNSKLSESNRFVYQMA AYNRTLSQIIGEDDYQTLMQDPASQQYLAERLAKLGHSKSVKIEKKWCNELRADYQKFNKATKTAKSAAKKATGKSKQAK KTVNKKSQKVARKEAEEKDIPYIGGINERVQDTSSMKTSSQGRANTAEDNSYQEPKAPNGRIKVNWDPVKNEVYSY >Mature_236_residues MKKLTFKSITLALTLMLAACGSHKDTNVSGLSEPEYKISDADMNKWIIEKNKVEQCLFPRKGSAKNSKLSESNRFVYQMA AYNRTLSQIIGEDDYQTLMQDPASQQYLAERLAKLGHSKSVKIEKKWCNELRADYQKFNKATKTAKSAAKKATGKSKQAK KTVNKKSQKVARKEAEEKDIPYIGGINERVQDTSSMKTSSQGRANTAEDNSYQEPKAPNGRIKVNWDPVKNEVYSY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26633; Mature: 26633
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLTFKSITLALTLMLAACGSHKDTNVSGLSEPEYKISDADMNKWIIEKNKVEQCLFPR CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC KGSAKNSKLSESNRFVYQMAAYNRTLSQIIGEDDYQTLMQDPASQQYLAERLAKLGHSKS CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHCCCCCC VKIEKKWCNELRADYQKFNKATKTAKSAAKKATGKSKQAKKTVNKKSQKVARKEAEEKDI EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC PYIGGINERVQDTSSMKTSSQGRANTAEDNSYQEPKAPNGRIKVNWDPVKNEVYSY CEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHCCC >Mature Secondary Structure MKKLTFKSITLALTLMLAACGSHKDTNVSGLSEPEYKISDADMNKWIIEKNKVEQCLFPR CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC KGSAKNSKLSESNRFVYQMAAYNRTLSQIIGEDDYQTLMQDPASQQYLAERLAKLGHSKS CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHCCCCCC VKIEKKWCNELRADYQKFNKATKTAKSAAKKATGKSKQAKKTVNKKSQKVARKEAEEKDI EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC PYIGGINERVQDTSSMKTSSQGRANTAEDNSYQEPKAPNGRIKVNWDPVKNEVYSY CEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA