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The map label for this gene is 126209334

Identifier: 126209334

GI number: 126209334

Start: 2101585

End: 2102253

Strand: Reverse

Name: 126209334

Synonym: APL_1872

Alternate gene names: NA

Gene position: 2102253-2101585 (Counterclockwise)

Preceding gene: 126209335

Following gene: 126209333

Centisome position: 92.43

GC content: 44.1

Gene sequence:

>669_bases
ATGATCGCAAACCTCGAACAAATTCTCACCGGCAAAACACGTGAACACCTTGTGCCGTTGCCGAATCCGTTATCGGATAA
ACACTTTTTGCAAGCTGAGGCGGTTGATGCTTTTCTTACATTGCAGCAGGCGGCAAAAGTAGCCGGTTTTAATTTACAGC
CCGCCAGCACTTATCGTGATTTTGATCGCCAAATGTTGATTTGGAATGCAAAATTTAACGGTGAGCGTAAGGTACATGAT
GATAACGGCTGTGCGATTGATATGGCTAAATTGGACGATTTACAGAAAATTCAAGCAATGATGCGCTGGTCGGCAGTACC
TGGTTCAAGCCGTCATCATTGGGGGACGGAAATTGATATTTTTGATCCCGATTTGCTACCGGAAGGGCAACATTTACAGC
TTGAGCCTTGGGAATATCAAACCGGCGGTTATTTTGCACCATTAGCCGAATGGCTACATCATAATGCCGAACGCTTTGGT
TTCTATTTCCCTTTTGATGGTATTCATAATGCGAAAGTCGGTTATGAGCCTTGGCATATCAGCTATCGTCCGATTTCCGC
CGAATATGAAAAGCAATTCAATTACCAGATTTTGCAAAAATCGTGGCAAAATGAACCGCTTGCCGGCAAAGCCTGCTTAC
TCGAACATTTTAACCGGCTATTCAGCTAA

Upstream 100 bases:

>100_bases
GAATGAATGTGTCAGCGTAGAAGACCTTGGTAAATGCGGAGAAGTGTACTATCACATCCTCGAACGTTTACTTAAAAGTT
AATACCGAGGAAATATTAAA

Downstream 100 bases:

>100_bases
TTTTTACAATTAACATAATGACAATTCAACTTATCAACGAATCTTCGAATACCGAGAAATTTCAGCAAATTTGTGACAAA
TGGCGACTGGTTCACGACCG

Product: putative D-alanyl-D-alanine carboxypeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MIANLEQILTGKTREHLVPLPNPLSDKHFLQAEAVDAFLTLQQAAKVAGFNLQPASTYRDFDRQMLIWNAKFNGERKVHD
DNGCAIDMAKLDDLQKIQAMMRWSAVPGSSRHHWGTEIDIFDPDLLPEGQHLQLEPWEYQTGGYFAPLAEWLHHNAERFG
FYFPFDGIHNAKVGYEPWHISYRPISAEYEKQFNYQILQKSWQNEPLAGKACLLEHFNRLFS

Sequences:

>Translated_222_residues
MIANLEQILTGKTREHLVPLPNPLSDKHFLQAEAVDAFLTLQQAAKVAGFNLQPASTYRDFDRQMLIWNAKFNGERKVHD
DNGCAIDMAKLDDLQKIQAMMRWSAVPGSSRHHWGTEIDIFDPDLLPEGQHLQLEPWEYQTGGYFAPLAEWLHHNAERFG
FYFPFDGIHNAKVGYEPWHISYRPISAEYEKQFNYQILQKSWQNEPLAGKACLLEHFNRLFS
>Mature_222_residues
MIANLEQILTGKTREHLVPLPNPLSDKHFLQAEAVDAFLTLQQAAKVAGFNLQPASTYRDFDRQMLIWNAKFNGERKVHD
DNGCAIDMAKLDDLQKIQAMMRWSAVPGSSRHHWGTEIDIFDPDLLPEGQHLQLEPWEYQTGGYFAPLAEWLHHNAERFG
FYFPFDGIHNAKVGYEPWHISYRPISAEYEKQFNYQILQKSWQNEPLAGKACLLEHFNRLFS

Specific function: Unknown

COG id: COG1876

COG function: function code M; D-alanyl-D-alanine carboxypeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003709 [H]

Pfam domain/function: PF02557 VanY [H]

EC number: NA

Molecular weight: Translated: 25742; Mature: 25742

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIANLEQILTGKTREHLVPLPNPLSDKHFLQAEAVDAFLTLQQAAKVAGFNLQPASTYRD
CCCCHHHHHCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
FDRQMLIWNAKFNGERKVHDDNGCAIDMAKLDDLQKIQAMMRWSAVPGSSRHHWGTEIDI
CCCEEEEEECCCCCCCEEECCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE
FDPDLLPEGQHLQLEPWEYQTGGYFAPLAEWLHHNAERFGFYFPFDGIHNAKVGYEPWHI
ECCCCCCCCCCEEECCCEECCCCCHHHHHHHHHCCHHHCEEECCCCCCCCCCCCCCCCEE
SYRPISAEYEKQFNYQILQKSWQNEPLAGKACLLEHFNRLFS
EECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MIANLEQILTGKTREHLVPLPNPLSDKHFLQAEAVDAFLTLQQAAKVAGFNLQPASTYRD
CCCCHHHHHCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
FDRQMLIWNAKFNGERKVHDDNGCAIDMAKLDDLQKIQAMMRWSAVPGSSRHHWGTEIDI
CCCEEEEEECCCCCCCEEECCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE
FDPDLLPEGQHLQLEPWEYQTGGYFAPLAEWLHHNAERFGFYFPFDGIHNAKVGYEPWHI
ECCCCCCCCCCEEECCCEECCCCCHHHHHHHHHCCHHHCEEECCCCCCCCCCCCCCCCEE
SYRPISAEYEKQFNYQILQKSWQNEPLAGKACLLEHFNRLFS
EECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]