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The map label for this gene is yihD [C]

Identifier: 126209329

GI number: 126209329

Start: 2097651

End: 2097920

Strand: Direct

Name: yihD [C]

Synonym: APL_1867

Alternate gene names: 126209329

Gene position: 2097651-2097920 (Clockwise)

Preceding gene: 126209327

Following gene: 126209330

Centisome position: 92.23

GC content: 38.15

Gene sequence:

>270_bases
ATGAAATGCAAACGTTTAGAAGAATTACTTGAGTTATTGGGCGAACATTGGCGTAAAAACCCGGATTTACATCTGATGGA
TATTTTACAACAACTTTCGATTGAAGTCGGAGAGCCGGATAACTATGCGGCATTACGTGATGAAGTGTTAATTTACCAAT
TAAAAATGCGTAATGCGGATAAACACGAGCCGATTCCCGGCATTAAAAAAGATTATGAAGAAGATTTCAAAACGGCACTG
TTACGTGCTCGCGGAATTTTAAACGATTAG

Upstream 100 bases:

>100_bases
TCTATTTGTAGCATTTTTAGGTCCAAGTTTTTTGCAAAAGTTTAGCTAAAAGTATATGATTCGGAACACTTTTCAACAAG
GATTTTTAAGGAAGCAAAGT

Downstream 100 bases:

>100_bases
TTGAGTCTAACAGGCACATTTATTTTTTATTCGAGGAACAATAATGAAAAAATTGGCATTAAAATCAGTTTTAGTCGCAC
TTTCTACATTTTTTGCAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 89; Mature: 89

Protein sequence:

>89_residues
MKCKRLEELLELLGEHWRKNPDLHLMDILQQLSIEVGEPDNYAALRDEVLIYQLKMRNADKHEPIPGIKKDYEEDFKTAL
LRARGILND

Sequences:

>Translated_89_residues
MKCKRLEELLELLGEHWRKNPDLHLMDILQQLSIEVGEPDNYAALRDEVLIYQLKMRNADKHEPIPGIKKDYEEDFKTAL
LRARGILND
>Mature_89_residues
MKCKRLEELLELLGEHWRKNPDLHLMDILQQLSIEVGEPDNYAALRDEVLIYQLKMRNADKHEPIPGIKKDYEEDFKTAL
LRARGILND

Specific function: Unknown

COG id: COG3084

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yihD [H]

Homologues:

Organism=Escherichia coli, GI1790289, Length=89, Percent_Identity=57.3033707865169, Blast_Score=104, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009383
- ProDom:   PD029038 [H]

Pfam domain/function: PF06288 DUF1040 [H]

EC number: NA

Molecular weight: Translated: 10499; Mature: 10499

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKCKRLEELLELLGEHWRKNPDLHLMDILQQLSIEVGEPDNYAALRDEVLIYQLKMRNAD
CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCC
KHEPIPGIKKDYEEDFKTALLRARGILND
CCCCCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKCKRLEELLELLGEHWRKNPDLHLMDILQQLSIEVGEPDNYAALRDEVLIYQLKMRNAD
CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCC
KHEPIPGIKKDYEEDFKTALLRARGILND
CCCCCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1438213; 7542800 [H]