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The map label for this gene is yedZ [H]

Identifier: 126209295

GI number: 126209295

Start: 2056276

End: 2056869

Strand: Direct

Name: yedZ [H]

Synonym: APL_1833

Alternate gene names: 126209295

Gene position: 2056276-2056869 (Clockwise)

Preceding gene: 126209294

Following gene: 126209298

Centisome position: 90.41

GC content: 39.73

Gene sequence:

>594_bases
ATGTTATCTATATTAAGAACAATTATTCATTTGGCTTGTGTTGTGCCGTTGGTTTGGGTCGGCTTCGTTTTATCCAGCGA
CGACCCGGAAATACTCGGAGCCGATCCGAGTAAAGATTTAATTCACTTTTTGGGTTACACCGCCATTATTATTTTCTGTG
TAATGTTTTTATTGGGTATTTTGCTCCAAATATTGAATAAAAACCAATATCAGATTTTACGCCGTCCGCTCGGACTATGG
GCATTTTTGTGGGCATTACTGCATGTATGCGGTTATTTAGTGTTAGAACTTGGTTTGGATTTTTCTTTATTTTTAAGTGA
AGTCGTCCAACGACCTTATCTTATCCTAGGTGCGATTGCATTTGTTATTCTATTGGCAATGTCCGTAACGTCTATTCCGT
TTATTAAACAGGCGTTAGGTAAAAAATGGTTTAGCGTGCACCAATTCGCTTACGTTGCGATTGTGGCGGCCGCCGTTCAT
TATTATTGGTCTGTAAAAGGTTTGACTCTAGGACCGATTACCATCGGGATAATGGTTGCGGTTATTGTCGGTTGGAAATA
TGCAGGAAATCGGTTGTTAGCTTATCTGAAGTGA

Upstream 100 bases:

>100_bases
GATTACTTGCGGTAAAACGTCAAGATACATTGATGTTTAACGGCTATGAGAAGGAAGTCGCTCACCTTTATAAAGGTCTG
GACTTAAAGGTAAACTTCTA

Downstream 100 bases:

>100_bases
TAGGATTAATTGCCCGATAAAAGAATTTATTTAGTCAGCATAAAAAATAAGCGGTCATTTTTACTAAAAATTCGGTAAAA
ATGACCGCTTATTATTTTTT

Product: putative sulfite oxidase subunit YedZ

Products: NA

Alternate protein names: Flavocytochrome yedZ [H]

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MLSILRTIIHLACVVPLVWVGFVLSSDDPEILGADPSKDLIHFLGYTAIIIFCVMFLLGILLQILNKNQYQILRRPLGLW
AFLWALLHVCGYLVLELGLDFSLFLSEVVQRPYLILGAIAFVILLAMSVTSIPFIKQALGKKWFSVHQFAYVAIVAAAVH
YYWSVKGLTLGPITIGIMVAVIVGWKYAGNRLLAYLK

Sequences:

>Translated_197_residues
MLSILRTIIHLACVVPLVWVGFVLSSDDPEILGADPSKDLIHFLGYTAIIIFCVMFLLGILLQILNKNQYQILRRPLGLW
AFLWALLHVCGYLVLELGLDFSLFLSEVVQRPYLILGAIAFVILLAMSVTSIPFIKQALGKKWFSVHQFAYVAIVAAAVH
YYWSVKGLTLGPITIGIMVAVIVGWKYAGNRLLAYLK
>Mature_197_residues
MLSILRTIIHLACVVPLVWVGFVLSSDDPEILGADPSKDLIHFLGYTAIIIFCVMFLLGILLQILNKNQYQILRRPLGLW
AFLWALLHVCGYLVLELGLDFSLFLSEVVQRPYLILGAIAFVILLAMSVTSIPFIKQALGKKWFSVHQFAYVAIVAAAVH
YYWSVKGLTLGPITIGIMVAVIVGWKYAGNRLLAYLK

Specific function: Is probably involved in the electron transfer between its heme and the molybdenum cofactor of the reductase catalytic subunit yedY [H]

COG id: COG2717

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedZ family [H]

Homologues:

Organism=Escherichia coli, GI1788283, Length=170, Percent_Identity=39.4117647058824, Blast_Score=122, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013130
- InterPro:   IPR022837 [H]

Pfam domain/function: PF01794 Ferric_reduct [H]

EC number: NA

Molecular weight: Translated: 22006; Mature: 22006

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSILRTIIHLACVVPLVWVGFVLSSDDPEILGADPSKDLIHFLGYTAIIIFCVMFLLGI
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LLQILNKNQYQILRRPLGLWAFLWALLHVCGYLVLELGLDFSLFLSEVVQRPYLILGAIA
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHH
FVILLAMSVTSIPFIKQALGKKWFSVHQFAYVAIVAAAVHYYWSVKGLTLGPITIGIMVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHH
VIVGWKYAGNRLLAYLK
HHHHHHHHCCHHHHCCC
>Mature Secondary Structure
MLSILRTIIHLACVVPLVWVGFVLSSDDPEILGADPSKDLIHFLGYTAIIIFCVMFLLGI
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LLQILNKNQYQILRRPLGLWAFLWALLHVCGYLVLELGLDFSLFLSEVVQRPYLILGAIA
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHH
FVILLAMSVTSIPFIKQALGKKWFSVHQFAYVAIVAAAVHYYWSVKGLTLGPITIGIMVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHH
VIVGWKYAGNRLLAYLK
HHHHHHHHCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11248100 [H]