Click here to switch to the map view.

The map label for this gene is nusG [H]

Identifier: 126209181

GI number: 126209181

Start: 1948786

End: 1949316

Strand: Direct

Name: nusG [H]

Synonym: APL_1717

Alternate gene names: 126209181

Gene position: 1948786-1949316 (Clockwise)

Preceding gene: 126209180

Following gene: 126209182

Centisome position: 85.68

GC content: 45.57

Gene sequence:

>531_bases
ATGCGTTGGTATGTATTACAAGCGTTTTCAGGTTTTGAAAACCGTGTTGCGGTAACATTGCGTGAATATATCAAATTACA
CCAAATGGAAGATCAATTTGGTGAAGTATTAGTACCGACCGAAGAAGTTGTTGAAAGCGTCGGCGGTCGCCGTCGTCGTA
CCGAGCGTAAATTCTTCCCTGGTTACGTATTGGTACAAATGGAAATGAATGACGATACGTGGCATTTAGTGAAAAGCGTG
CCTCGTGTAATGGGCTTTATCGGCGGCACAGCGGATAAACCGGCACCGATTTCTAAACGTGAAGCGGATCGTATTTTAAA
CCGCGTTCAAGAAACGGCGGAAAAACCGCGTCACAGAAAAGAATTCCAGCCGGGCGAAAACGTACGTGTTACCGAAGGTC
CGTTCGCAGACTTTACCGGTACGGTGGAAGAAGTGGATTACGAAAAAGGTCGCTTAAAAGTATCCGTATCTATTTTCGGA
CGTGCGACACCGGTTGAACTGGAATTCGGTCAAGTAGAAAAACAATCGTAA

Upstream 100 bases:

>100_bases
GTATTATGGGGTATCGACTCTATTATCGTTACATTGGTTACGTTTTTAACAAATTTAAGGTTCTAAAATGAGCGAAGTAG
AAAATACAGAAGCAACAAAA

Downstream 100 bases:

>100_bases
TGGCTTTGTGATTTTATAAAATAAGATTGAAATTAAGCGGTTTATTTTCAAAGAATATTTGCAAAAATAAGTTTAAAAAT
AACCGCTTTTCTTATTCCAC

Product: transcription antitermination protein NusG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MRWYVLQAFSGFENRVAVTLREYIKLHQMEDQFGEVLVPTEEVVESVGGRRRRTERKFFPGYVLVQMEMNDDTWHLVKSV
PRVMGFIGGTADKPAPISKREADRILNRVQETAEKPRHRKEFQPGENVRVTEGPFADFTGTVEEVDYEKGRLKVSVSIFG
RATPVELEFGQVEKQS

Sequences:

>Translated_176_residues
MRWYVLQAFSGFENRVAVTLREYIKLHQMEDQFGEVLVPTEEVVESVGGRRRRTERKFFPGYVLVQMEMNDDTWHLVKSV
PRVMGFIGGTADKPAPISKREADRILNRVQETAEKPRHRKEFQPGENVRVTEGPFADFTGTVEEVDYEKGRLKVSVSIFG
RATPVELEFGQVEKQS
>Mature_176_residues
MRWYVLQAFSGFENRVAVTLREYIKLHQMEDQFGEVLVPTEEVVESVGGRRRRTERKFFPGYVLVQMEMNDDTWHLVKSV
PRVMGFIGGTADKPAPISKREADRILNRVQETAEKPRHRKEFQPGENVRVTEGPFADFTGTVEEVDYEKGRLKVSVSIFG
RATPVELEFGQVEKQS

Specific function: Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase [H]

COG id: COG0250

COG function: function code K; Transcription antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KOW domain [H]

Homologues:

Organism=Escherichia coli, GI1790414, Length=173, Percent_Identity=75.7225433526011, Blast_Score=277, Evalue=3e-76,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005824
- InterPro:   IPR001062
- InterPro:   IPR015869
- InterPro:   IPR006645
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF00467 KOW; PF02357 NusG [H]

EC number: NA

Molecular weight: Translated: 20292; Mature: 20292

Theoretical pI: Translated: 6.82; Mature: 6.82

Prosite motif: PS01014 NUSG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWYVLQAFSGFENRVAVTLREYIKLHQMEDQFGEVLVPTEEVVESVGGRRRRTERKFFP
CEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCEECCHHHHHHHHCCHHHHHHHCCCC
GYVLVQMEMNDDTWHLVKSVPRVMGFIGGTADKPAPISKREADRILNRVQETAEKPRHRK
CEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHH
EFQPGENVRVTEGPFADFTGTVEEVDYEKGRLKVSVSIFGRATPVELEFGQVEKQS
CCCCCCCEEECCCCCCCCCCCHHHHCCCCCEEEEEEEEECCCCCEEEECCCCCCCC
>Mature Secondary Structure
MRWYVLQAFSGFENRVAVTLREYIKLHQMEDQFGEVLVPTEEVVESVGGRRRRTERKFFP
CEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCEECCHHHHHHHHCCHHHHHHHCCCC
GYVLVQMEMNDDTWHLVKSVPRVMGFIGGTADKPAPISKREADRILNRVQETAEKPRHRK
CEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHH
EFQPGENVRVTEGPFADFTGTVEEVDYEKGRLKVSVSIFGRATPVELEFGQVEKQS
CCCCCCCEEECCCCCCCCCCCHHHHCCCCCEEEEEEEEECCCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11248100 [H]