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The map label for this gene is secE [H]

Identifier: 126209180

GI number: 126209180

Start: 1948338

End: 1948751

Strand: Direct

Name: secE [H]

Synonym: APL_1716

Alternate gene names: 126209180

Gene position: 1948338-1948751 (Clockwise)

Preceding gene: 126209176

Following gene: 126209181

Centisome position: 85.66

GC content: 43.24

Gene sequence:

>414_bases
ATGGCTACTGAGATTAAAAAGAAAACCCCCGAACAAGTCGAAGAAAAGGGCGTGAAAAGTAAGGGCGTAAACAGCGTATT
ATGGTGTTTGGCTATCTTATTACTTGCTGTGGCGGCGATTGGTAATGCATATTTCGCCTCGAGTTTTTCGCTCGTGGTAC
GCGTATTATTGCTTGTCGTGTTAGTGGTCGGTGCGGTAGTGCTTGCGGCAATGACTAACCAGGGTCAAACAGCGATTGGC
TTTATTAAAGAAGCTCGCACGGAGCTTAGAAAAATTATTTGGCCGACTCGCCCTGAAGCGACTCAAACAACATTAATCGT
GCTCGCAATGTGTGTGGTTGTGTCATTAGTATTATGGGGTATCGACTCTATTATCGTTACATTGGTTACGTTTTTAACAA
ATTTAAGGTTCTAA

Upstream 100 bases:

>100_bases
ATAATTTTTCATAAAAGATCGTGGCAAGTGAAATGAAAAATGTTAGAATCCAACGCTTTTAGAAATAATTGTTCTTTTTT
TACAAAATTTTAGGTTTTAT

Downstream 100 bases:

>100_bases
AATGAGCGAAGTAGAAAATACAGAAGCAACAAAAATGCGTTGGTATGTATTACAAGCGTTTTCAGGTTTTGAAAACCGTG
TTGCGGTAACATTGCGTGAA

Product: preprotein translocase subunit SecE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MATEIKKKTPEQVEEKGVKSKGVNSVLWCLAILLLAVAAIGNAYFASSFSLVVRVLLLVVLVVGAVVLAAMTNQGQTAIG
FIKEARTELRKIIWPTRPEATQTTLIVLAMCVVVSLVLWGIDSIIVTLVTFLTNLRF

Sequences:

>Translated_137_residues
MATEIKKKTPEQVEEKGVKSKGVNSVLWCLAILLLAVAAIGNAYFASSFSLVVRVLLLVVLVVGAVVLAAMTNQGQTAIG
FIKEARTELRKIIWPTRPEATQTTLIVLAMCVVVSLVLWGIDSIIVTLVTFLTNLRF
>Mature_136_residues
ATEIKKKTPEQVEEKGVKSKGVNSVLWCLAILLLAVAAIGNAYFASSFSLVVRVLLLVVLVVGAVVLAAMTNQGQTAIGF
IKEARTELRKIIWPTRPEATQTTLIVLAMCVVVSLVLWGIDSIIVTLVTFLTNLRF

Specific function: Essential for protein export [H]

COG id: COG0690

COG function: function code U; Preprotein translocase subunit SecE

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secE/SEC61-gamma family [H]

Homologues:

Organism=Escherichia coli, GI1790413, Length=126, Percent_Identity=44.4444444444444, Blast_Score=100, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001901
- InterPro:   IPR005807 [H]

Pfam domain/function: PF00584 SecE [H]

EC number: NA

Molecular weight: Translated: 14855; Mature: 14724

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: PS01067 SECE_SEC61G

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATEIKKKTPEQVEEKGVKSKGVNSVLWCLAILLLAVAAIGNAYFASSFSLVVRVLLLVV
CCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVVGAVVLAAMTNQGQTAIGFIKEARTELRKIIWPTRPEATQTTLIVLAMCVVVSLVLWG
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
IDSIIVTLVTFLTNLRF
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ATEIKKKTPEQVEEKGVKSKGVNSVLWCLAILLLAVAAIGNAYFASSFSLVVRVLLLVV
CCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVVGAVVLAAMTNQGQTAIGFIKEARTELRKIIWPTRPEATQTTLIVLAMCVVVSLVLWG
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
IDSIIVTLVTFLTNLRF
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]