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The map label for this gene is ulaD [H]

Identifier: 126209162

GI number: 126209162

Start: 1929811

End: 1930491

Strand: Reverse

Name: ulaD [H]

Synonym: APL_1698

Alternate gene names: 126209162

Gene position: 1930491-1929811 (Counterclockwise)

Preceding gene: 126209163

Following gene: 126209161

Centisome position: 84.88

GC content: 45.81

Gene sequence:

>681_bases
ATGTCAAAACCATTACTTCAAATTGCATTAGATTCATTAAGCTTAGAAAAAGCGGTTGCGGATGCGAAACAAGCGGAAAG
CGTAGTAGAAATTATTGAGTGCGGTACGATCCTTGCTTGTGCGGAAGGAATGAAAGCGGTTTCCACCTTACGTGCGTTAC
ATCCGAATCATATTATCGTATGCGACTTAAAAACCACCGACGGCGGTGCGATTTTAGCCAAAATGGCATTTGAAGCGGGA
GCGGATTGGTTGACCGTTTCGGCGGCGGCGCATCCGGCGACCAAAGCAGCGTGTAAGAAAGTCGCGGACGATTTCAATGC
GGCGCATCCGGAACTAAAAGTGAAGAAAGAAATCCAAATCGAAATCTACGGTAACTGGACGGTAGAAAAAGATGCGAAAG
AATGGGTTGAATTAGGCGTAAAACAAGCGATTTATCACCGTTCTCGCGATGCGGAATTGGCAGGTAAAGGTTGGACGCCG
GAAGATGTCGAATTAATGAAACAACTTTCCGCACTCGGCTTAGAACTCTCTATCACCGGCGGCATCGTACCGGAAGATAT
TCATTTATTTAAAGAAATCAAAAATGCCAAAGCCTTTATCGCAGGTCGTGCTTTAGTCGGCGAAAAAGGTAAACAAACCG
CCGAAGCGATTCGTGCCGAAGTGGATAAATACTGGGCTTAA

Upstream 100 bases:

>100_bases
GGTCATCGATCAAGCATTAGCCGGTTAGAAATTCTCCCTCTCTCTCTGCTTGCGAGAGAGGAATAAAGAACGATTTAACA
ATTCGTAAAAGGAACAAAAT

Downstream 100 bases:

>100_bases
TTTCTTTCTCTTTTGAAAAATAACAAGCGGTCGATTTGTAAAAAATTCTTGCAAATCGACCGCTTTCTTATGATTACCGC
CGAAATATCACGCATTGCTT

Product: 3-keto-L-gulonate-6-phosphate decarboxylase

Products: NA

Alternate protein names: KGPDC; 3-dehydro-L-gulonate-6-phosphate decarboxylase [H]

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MSKPLLQIALDSLSLEKAVADAKQAESVVEIIECGTILACAEGMKAVSTLRALHPNHIIVCDLKTTDGGAILAKMAFEAG
ADWLTVSAAAHPATKAACKKVADDFNAAHPELKVKKEIQIEIYGNWTVEKDAKEWVELGVKQAIYHRSRDAELAGKGWTP
EDVELMKQLSALGLELSITGGIVPEDIHLFKEIKNAKAFIAGRALVGEKGKQTAEAIRAEVDKYWA

Sequences:

>Translated_226_residues
MSKPLLQIALDSLSLEKAVADAKQAESVVEIIECGTILACAEGMKAVSTLRALHPNHIIVCDLKTTDGGAILAKMAFEAG
ADWLTVSAAAHPATKAACKKVADDFNAAHPELKVKKEIQIEIYGNWTVEKDAKEWVELGVKQAIYHRSRDAELAGKGWTP
EDVELMKQLSALGLELSITGGIVPEDIHLFKEIKNAKAFIAGRALVGEKGKQTAEAIRAEVDKYWA
>Mature_225_residues
SKPLLQIALDSLSLEKAVADAKQAESVVEIIECGTILACAEGMKAVSTLRALHPNHIIVCDLKTTDGGAILAKMAFEAGA
DWLTVSAAAHPATKAACKKVADDFNAAHPELKVKKEIQIEIYGNWTVEKDAKEWVELGVKQAIYHRSRDAELAGKGWTPE
DVELMKQLSALGLELSITGGIVPEDIHLFKEIKNAKAFIAGRALVGEKGKQTAEAIRAEVDKYWA

Specific function: Catalyzes the decarboxylation of 3-keto-L-gulonate-6-P into L-xylulose-5-P [H]

COG id: COG0269

COG function: function code G; 3-hexulose-6-phosphate synthase and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HPS/KGPDC family. KGPDC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790006, Length=226, Percent_Identity=48.6725663716814, Blast_Score=193, Evalue=6e-51,
Organism=Escherichia coli, GI1790640, Length=205, Percent_Identity=42.4390243902439, Blast_Score=166, Evalue=2e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR001754
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00215 OMPdecase [H]

EC number: =4.1.1.85 [H]

Molecular weight: Translated: 24413; Mature: 24282

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKPLLQIALDSLSLEKAVADAKQAESVVEIIECGTILACAEGMKAVSTLRALHPNHIIV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCEEEE
CDLKTTDGGAILAKMAFEAGADWLTVSAAAHPATKAACKKVADDFNAAHPELKVKKEIQI
EEEEECCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEE
EIYGNWTVEKDAKEWVELGVKQAIYHRSRDAELAGKGWTPEDVELMKQLSALGLELSITG
EEEECEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEECC
GIVPEDIHLFKEIKNAKAFIAGRALVGEKGKQTAEAIRAEVDKYWA
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SKPLLQIALDSLSLEKAVADAKQAESVVEIIECGTILACAEGMKAVSTLRALHPNHIIV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCEEEE
CDLKTTDGGAILAKMAFEAGADWLTVSAAAHPATKAACKKVADDFNAAHPELKVKKEIQI
EEEEECCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEE
EIYGNWTVEKDAKEWVELGVKQAIYHRSRDAELAGKGWTPEDVELMKQLSALGLELSITG
EEEECEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEECC
GIVPEDIHLFKEIKNAKAFIAGRALVGEKGKQTAEAIRAEVDKYWA
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 9274005 [H]