| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
Click here to switch to the map view.
The map label for this gene is 126209161
Identifier: 126209161
GI number: 126209161
Start: 1928704
End: 1929798
Strand: Reverse
Name: 126209161
Synonym: APL_1697
Alternate gene names: NA
Gene position: 1929798-1928704 (Counterclockwise)
Preceding gene: 126209162
Following gene: 126209146
Centisome position: 84.85
GC content: 41.1
Gene sequence:
>1095_bases TTGAAAAATAACAAGCGGTCGATTTGTAAAAAATTCTTGCAAATCGACCGCTTTCTTATGATTACCGCCGAAATATCACG CATTGCTTTTGAATCACAGGCTAATTTGGATTATGATAGCTTCAAATTTCTTAATGAAGATCACGCCTATGAAACAGCTC AAACTTACCTGCATCGTATTATCCGCCGCACTTTCCGCTCCTCTTTCGCAAATGAAACAACCGAAACCGAAAACACTTGG GCGGATCAACAACGCAATTCGATCCGTTCCAAATTGCACGACTGGTCAAACGGTATTAACGATTGGCTGGGCGAAACCGA TCCGAACAAACCGGCATCGGCAAGTTTGCGAGTAATGTTAGACAATCAATGGAATAAACACGACCGTTTTTCCTATAAAC CGCGTGTGCGAGGTAAAATCAGATTACCGGTACTGAAAAAACACGTGAGTGTGGTATTCGGTGATGAAGATTTGGAAAAC CAAGCGCGCGATAAAAACCATGTAGGGCAAAATTACCGTAATCTGCCTCGTGATCGTAATTACGACAGCCGTCAAGCACG TAATGATAACGCCTCTATCGGTTTACGTTGGTCAAACGAAATTAAACGTTTAGGCATCGAAAGCGATTTGGACGGCGGTT TACGTTCGGGCGGTGATATTTTCGGACGTTTACGCTTAAGTAAAACATGGGATATTACCGACAATTTCGGTACGCGCTTA GAACAAATTTACCGTTACGGTACCAATAGTAAGCACTACTTACGTACTAATTTAGAAAATCGCTATATTGACAGTGAAAA CACCTTCATTATGAATCATACTTTCCTACAATATACGCATGACGTGGATGAAGAAACCGGCTGGGGAAACAGTTTTTATC GTCAGCATAACTTTACCCCGCTTAAACGTTTAAGCTACGGTATATTTATGGGCGGACGTTTTGATAAAGGTTACTCAAAA TTTAACACTTACGGACCATTTATCAGCTATCGCCAACCGATTTTCCGTAATTGGGTGTTTATTCAACCGGAAATCAGCTT CTATAACGATAAGACAAAGATCGTAACCACTTCATCAATACCTTTATGCGTTTAG
Upstream 100 bases:
>100_bases CTTTATCGCAGGTCGTGCTTTAGTCGGCGAAAAAGGTAAACAAACCGCCGAAGCGATTCGTGCCGAAGTGGATAAATACT GGGCTTAATTTCTTTCTCTT
Downstream 100 bases:
>100_bases AAGTGATCTTTTAGAGAATAGATTAGAAAAGCGGTTATTTTTTGTGAAGATTTTACAAAAAATAACCGGTTGTTGTGTTA AGGTGTAGCTTTGATTATAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 364; Mature: 364
Protein sequence:
>364_residues MKNNKRSICKKFLQIDRFLMITAEISRIAFESQANLDYDSFKFLNEDHAYETAQTYLHRIIRRTFRSSFANETTETENTW ADQQRNSIRSKLHDWSNGINDWLGETDPNKPASASLRVMLDNQWNKHDRFSYKPRVRGKIRLPVLKKHVSVVFGDEDLEN QARDKNHVGQNYRNLPRDRNYDSRQARNDNASIGLRWSNEIKRLGIESDLDGGLRSGGDIFGRLRLSKTWDITDNFGTRL EQIYRYGTNSKHYLRTNLENRYIDSENTFIMNHTFLQYTHDVDEETGWGNSFYRQHNFTPLKRLSYGIFMGGRFDKGYSK FNTYGPFISYRQPIFRNWVFIQPEISFYNDKTKIVTTSSIPLCV
Sequences:
>Translated_364_residues MKNNKRSICKKFLQIDRFLMITAEISRIAFESQANLDYDSFKFLNEDHAYETAQTYLHRIIRRTFRSSFANETTETENTW ADQQRNSIRSKLHDWSNGINDWLGETDPNKPASASLRVMLDNQWNKHDRFSYKPRVRGKIRLPVLKKHVSVVFGDEDLEN QARDKNHVGQNYRNLPRDRNYDSRQARNDNASIGLRWSNEIKRLGIESDLDGGLRSGGDIFGRLRLSKTWDITDNFGTRL EQIYRYGTNSKHYLRTNLENRYIDSENTFIMNHTFLQYTHDVDEETGWGNSFYRQHNFTPLKRLSYGIFMGGRFDKGYSK FNTYGPFISYRQPIFRNWVFIQPEISFYNDKTKIVTTSSIPLCV >Mature_364_residues MKNNKRSICKKFLQIDRFLMITAEISRIAFESQANLDYDSFKFLNEDHAYETAQTYLHRIIRRTFRSSFANETTETENTW ADQQRNSIRSKLHDWSNGINDWLGETDPNKPASASLRVMLDNQWNKHDRFSYKPRVRGKIRLPVLKKHVSVVFGDEDLEN QARDKNHVGQNYRNLPRDRNYDSRQARNDNASIGLRWSNEIKRLGIESDLDGGLRSGGDIFGRLRLSKTWDITDNFGTRL EQIYRYGTNSKHYLRTNLENRYIDSENTFIMNHTFLQYTHDVDEETGWGNSFYRQHNFTPLKRLSYGIFMGGRFDKGYSK FNTYGPFISYRQPIFRNWVFIQPEISFYNDKTKIVTTSSIPLCV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43051; Mature: 43051
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNNKRSICKKFLQIDRFLMITAEISRIAFESQANLDYDSFKFLNEDHAYETAQTYLHRI CCCCHHHHHHHHHHHHHHHEEHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHH IRRTFRSSFANETTETENTWADQQRNSIRSKLHDWSNGINDWLGETDPNKPASASLRVML HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCEEEEEE DNQWNKHDRFSYKPRVRGKIRLPVLKKHVSVVFGDEDLENQARDKNHVGQNYRNLPRDRN CCCCCCCCCCCCCCCCCCEEECHHHHCCEEEEECCCHHHHHHHHHHHHCHHHHCCCCCCC YDSRQARNDNASIGLRWSNEIKRLGIESDLDGGLRSGGDIFGRLRLSKTWDITDNFGTRL CCHHHCCCCCCEEEEEEHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCEECCCCHHHHHH EQIYRYGTNSKHYLRTNLENRYIDSENTFIMNHTFLQYTHDVDEETGWGNSFYRQHNFTP HHHHHCCCCCCEEEEECCCCCEECCCCEEEEECCEEEEECCCCCCCCCCCHHHHCCCCCH LKRLSYGIFMGGRFDKGYSKFNTYGPFISYRQPIFRNWVFIQPEISFYNDKTKIVTTSSI HHHHHHHEEECCCCCCCHHHHCCCCCCHHHCCHHHHCEEEEECCCEEECCCEEEEEECCC PLCV CCCC >Mature Secondary Structure MKNNKRSICKKFLQIDRFLMITAEISRIAFESQANLDYDSFKFLNEDHAYETAQTYLHRI CCCCHHHHHHHHHHHHHHHEEHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHH IRRTFRSSFANETTETENTWADQQRNSIRSKLHDWSNGINDWLGETDPNKPASASLRVML HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCEEEEEE DNQWNKHDRFSYKPRVRGKIRLPVLKKHVSVVFGDEDLENQARDKNHVGQNYRNLPRDRN CCCCCCCCCCCCCCCCCCEEECHHHHCCEEEEECCCHHHHHHHHHHHHCHHHHCCCCCCC YDSRQARNDNASIGLRWSNEIKRLGIESDLDGGLRSGGDIFGRLRLSKTWDITDNFGTRL CCHHHCCCCCCEEEEEEHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCEECCCCHHHHHH EQIYRYGTNSKHYLRTNLENRYIDSENTFIMNHTFLQYTHDVDEETGWGNSFYRQHNFTP HHHHHCCCCCCEEEEECCCCCEECCCCEEEEECCEEEEECCCCCCCCCCCHHHHCCCCCH LKRLSYGIFMGGRFDKGYSKFNTYGPFISYRQPIFRNWVFIQPEISFYNDKTKIVTTSSI HHHHHHHEEECCCCCCCHHHHCCCCCCHHHCCHHHHCEEEEECCCEEECCCEEEEEECCC PLCV CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA