Definition Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome.
Accession NC_009053
Length 2,274,482

Click here to switch to the map view.

The map label for this gene is 126209161

Identifier: 126209161

GI number: 126209161

Start: 1928704

End: 1929798

Strand: Reverse

Name: 126209161

Synonym: APL_1697

Alternate gene names: NA

Gene position: 1929798-1928704 (Counterclockwise)

Preceding gene: 126209162

Following gene: 126209146

Centisome position: 84.85

GC content: 41.1

Gene sequence:

>1095_bases
TTGAAAAATAACAAGCGGTCGATTTGTAAAAAATTCTTGCAAATCGACCGCTTTCTTATGATTACCGCCGAAATATCACG
CATTGCTTTTGAATCACAGGCTAATTTGGATTATGATAGCTTCAAATTTCTTAATGAAGATCACGCCTATGAAACAGCTC
AAACTTACCTGCATCGTATTATCCGCCGCACTTTCCGCTCCTCTTTCGCAAATGAAACAACCGAAACCGAAAACACTTGG
GCGGATCAACAACGCAATTCGATCCGTTCCAAATTGCACGACTGGTCAAACGGTATTAACGATTGGCTGGGCGAAACCGA
TCCGAACAAACCGGCATCGGCAAGTTTGCGAGTAATGTTAGACAATCAATGGAATAAACACGACCGTTTTTCCTATAAAC
CGCGTGTGCGAGGTAAAATCAGATTACCGGTACTGAAAAAACACGTGAGTGTGGTATTCGGTGATGAAGATTTGGAAAAC
CAAGCGCGCGATAAAAACCATGTAGGGCAAAATTACCGTAATCTGCCTCGTGATCGTAATTACGACAGCCGTCAAGCACG
TAATGATAACGCCTCTATCGGTTTACGTTGGTCAAACGAAATTAAACGTTTAGGCATCGAAAGCGATTTGGACGGCGGTT
TACGTTCGGGCGGTGATATTTTCGGACGTTTACGCTTAAGTAAAACATGGGATATTACCGACAATTTCGGTACGCGCTTA
GAACAAATTTACCGTTACGGTACCAATAGTAAGCACTACTTACGTACTAATTTAGAAAATCGCTATATTGACAGTGAAAA
CACCTTCATTATGAATCATACTTTCCTACAATATACGCATGACGTGGATGAAGAAACCGGCTGGGGAAACAGTTTTTATC
GTCAGCATAACTTTACCCCGCTTAAACGTTTAAGCTACGGTATATTTATGGGCGGACGTTTTGATAAAGGTTACTCAAAA
TTTAACACTTACGGACCATTTATCAGCTATCGCCAACCGATTTTCCGTAATTGGGTGTTTATTCAACCGGAAATCAGCTT
CTATAACGATAAGACAAAGATCGTAACCACTTCATCAATACCTTTATGCGTTTAG

Upstream 100 bases:

>100_bases
CTTTATCGCAGGTCGTGCTTTAGTCGGCGAAAAAGGTAAACAAACCGCCGAAGCGATTCGTGCCGAAGTGGATAAATACT
GGGCTTAATTTCTTTCTCTT

Downstream 100 bases:

>100_bases
AAGTGATCTTTTAGAGAATAGATTAGAAAAGCGGTTATTTTTTGTGAAGATTTTACAAAAAATAACCGGTTGTTGTGTTA
AGGTGTAGCTTTGATTATAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MKNNKRSICKKFLQIDRFLMITAEISRIAFESQANLDYDSFKFLNEDHAYETAQTYLHRIIRRTFRSSFANETTETENTW
ADQQRNSIRSKLHDWSNGINDWLGETDPNKPASASLRVMLDNQWNKHDRFSYKPRVRGKIRLPVLKKHVSVVFGDEDLEN
QARDKNHVGQNYRNLPRDRNYDSRQARNDNASIGLRWSNEIKRLGIESDLDGGLRSGGDIFGRLRLSKTWDITDNFGTRL
EQIYRYGTNSKHYLRTNLENRYIDSENTFIMNHTFLQYTHDVDEETGWGNSFYRQHNFTPLKRLSYGIFMGGRFDKGYSK
FNTYGPFISYRQPIFRNWVFIQPEISFYNDKTKIVTTSSIPLCV

Sequences:

>Translated_364_residues
MKNNKRSICKKFLQIDRFLMITAEISRIAFESQANLDYDSFKFLNEDHAYETAQTYLHRIIRRTFRSSFANETTETENTW
ADQQRNSIRSKLHDWSNGINDWLGETDPNKPASASLRVMLDNQWNKHDRFSYKPRVRGKIRLPVLKKHVSVVFGDEDLEN
QARDKNHVGQNYRNLPRDRNYDSRQARNDNASIGLRWSNEIKRLGIESDLDGGLRSGGDIFGRLRLSKTWDITDNFGTRL
EQIYRYGTNSKHYLRTNLENRYIDSENTFIMNHTFLQYTHDVDEETGWGNSFYRQHNFTPLKRLSYGIFMGGRFDKGYSK
FNTYGPFISYRQPIFRNWVFIQPEISFYNDKTKIVTTSSIPLCV
>Mature_364_residues
MKNNKRSICKKFLQIDRFLMITAEISRIAFESQANLDYDSFKFLNEDHAYETAQTYLHRIIRRTFRSSFANETTETENTW
ADQQRNSIRSKLHDWSNGINDWLGETDPNKPASASLRVMLDNQWNKHDRFSYKPRVRGKIRLPVLKKHVSVVFGDEDLEN
QARDKNHVGQNYRNLPRDRNYDSRQARNDNASIGLRWSNEIKRLGIESDLDGGLRSGGDIFGRLRLSKTWDITDNFGTRL
EQIYRYGTNSKHYLRTNLENRYIDSENTFIMNHTFLQYTHDVDEETGWGNSFYRQHNFTPLKRLSYGIFMGGRFDKGYSK
FNTYGPFISYRQPIFRNWVFIQPEISFYNDKTKIVTTSSIPLCV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43051; Mature: 43051

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNNKRSICKKFLQIDRFLMITAEISRIAFESQANLDYDSFKFLNEDHAYETAQTYLHRI
CCCCHHHHHHHHHHHHHHHEEHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHH
IRRTFRSSFANETTETENTWADQQRNSIRSKLHDWSNGINDWLGETDPNKPASASLRVML
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCEEEEEE
DNQWNKHDRFSYKPRVRGKIRLPVLKKHVSVVFGDEDLENQARDKNHVGQNYRNLPRDRN
CCCCCCCCCCCCCCCCCCEEECHHHHCCEEEEECCCHHHHHHHHHHHHCHHHHCCCCCCC
YDSRQARNDNASIGLRWSNEIKRLGIESDLDGGLRSGGDIFGRLRLSKTWDITDNFGTRL
CCHHHCCCCCCEEEEEEHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCEECCCCHHHHHH
EQIYRYGTNSKHYLRTNLENRYIDSENTFIMNHTFLQYTHDVDEETGWGNSFYRQHNFTP
HHHHHCCCCCCEEEEECCCCCEECCCCEEEEECCEEEEECCCCCCCCCCCHHHHCCCCCH
LKRLSYGIFMGGRFDKGYSKFNTYGPFISYRQPIFRNWVFIQPEISFYNDKTKIVTTSSI
HHHHHHHEEECCCCCCCHHHHCCCCCCHHHCCHHHHCEEEEECCCEEECCCEEEEEECCC
PLCV
CCCC
>Mature Secondary Structure
MKNNKRSICKKFLQIDRFLMITAEISRIAFESQANLDYDSFKFLNEDHAYETAQTYLHRI
CCCCHHHHHHHHHHHHHHHEEHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHH
IRRTFRSSFANETTETENTWADQQRNSIRSKLHDWSNGINDWLGETDPNKPASASLRVML
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCEEEEEE
DNQWNKHDRFSYKPRVRGKIRLPVLKKHVSVVFGDEDLENQARDKNHVGQNYRNLPRDRN
CCCCCCCCCCCCCCCCCCEEECHHHHCCEEEEECCCHHHHHHHHHHHHCHHHHCCCCCCC
YDSRQARNDNASIGLRWSNEIKRLGIESDLDGGLRSGGDIFGRLRLSKTWDITDNFGTRL
CCHHHCCCCCCEEEEEEHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCEECCCCHHHHHH
EQIYRYGTNSKHYLRTNLENRYIDSENTFIMNHTFLQYTHDVDEETGWGNSFYRQHNFTP
HHHHHCCCCCCEEEEECCCCCEECCCCEEEEECCEEEEECCCCCCCCCCCHHHHCCCCCH
LKRLSYGIFMGGRFDKGYSKFNTYGPFISYRQPIFRNWVFIQPEISFYNDKTKIVTTSSI
HHHHHHHEEECCCCCCCHHHHCCCCCCHHHCCHHHHCEEEEECCCEEECCCEEEEEECCC
PLCV
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA