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The map label for this gene is yagU [H]

Identifier: 126209154

GI number: 126209154

Start: 1921375

End: 1922016

Strand: Direct

Name: yagU [H]

Synonym: APL_1690

Alternate gene names: 126209154

Gene position: 1921375-1922016 (Clockwise)

Preceding gene: 126209153

Following gene: 126209155

Centisome position: 84.48

GC content: 44.86

Gene sequence:

>642_bases
ATGGGCATCTTCGAACAAACAAATCCGAGCCGTCGTCGTTACGGTTTAGCGGTATTCGTCGGTATTATCGCCGGTATTAT
TTCAGCATTCGTAAAATGGGGTGCGGAACATCCTTTCCCACCGCGTAGCCCGATCGATTTATTCCAATCTGCGTGTCCGC
AACCGGTTTTAGACGCATTAAATTCAGGATCATTAGCGATGAACAGCGCATTAGAGCAATGTTCTCGTGCGGTATTAAAC
CCTCCGGCGGTTTTCTTACGTGATTACATCGGTATCGACCCTTATAACACGGTTGCATTTACTTTTGCGGATCACACATT
TAACTCAATCGGCGTAACACATATGATTTTCTCATTAGTGTTTGCGATCGGTTACTGCTTAGTCGCGGAAGTATTCCCGA
AAATTAAATTCTGGCAAGGTATCGGTGCGGGTATCATCGCAAATATCTGTGTACACTACATTACATTCCCGGCATTAGGC
TTAACACCACCGGTTGCGGAATGGCCTTTATACGAACATATTTCCGAATTAGTCGGTCACATCTTCTGGTTCTGGACAAT
TGAGGTAATTCGTCGTGATTTACGTAACCGTATTACCAAAGAGCCGGATGCGGAAGAGCCGTTAAATCAAGCTCATCGTT
AA

Upstream 100 bases:

>100_bases
ATAAATTGAGTAGAAAATAACCTCGAATTTTTGAAATGCTATTTCAAAAAACCATAAAAAACTTGTTTTTATTTTTTCTT
TTTATTTATAGGAACTTATT

Downstream 100 bases:

>100_bases
TCTAGATAAATTAACTTTAAAAGAGCCGCCTTATTAGGCGGCTTTTTTGATCGTAACAAGCGGTCGAATTTTTCGTATTT
TTTACCTTTGGTTATTCATA

Product: inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MGIFEQTNPSRRRYGLAVFVGIIAGIISAFVKWGAEHPFPPRSPIDLFQSACPQPVLDALNSGSLAMNSALEQCSRAVLN
PPAVFLRDYIGIDPYNTVAFTFADHTFNSIGVTHMIFSLVFAIGYCLVAEVFPKIKFWQGIGAGIIANICVHYITFPALG
LTPPVAEWPLYEHISELVGHIFWFWTIEVIRRDLRNRITKEPDAEEPLNQAHR

Sequences:

>Translated_213_residues
MGIFEQTNPSRRRYGLAVFVGIIAGIISAFVKWGAEHPFPPRSPIDLFQSACPQPVLDALNSGSLAMNSALEQCSRAVLN
PPAVFLRDYIGIDPYNTVAFTFADHTFNSIGVTHMIFSLVFAIGYCLVAEVFPKIKFWQGIGAGIIANICVHYITFPALG
LTPPVAEWPLYEHISELVGHIFWFWTIEVIRRDLRNRITKEPDAEEPLNQAHR
>Mature_212_residues
GIFEQTNPSRRRYGLAVFVGIIAGIISAFVKWGAEHPFPPRSPIDLFQSACPQPVLDALNSGSLAMNSALEQCSRAVLNP
PAVFLRDYIGIDPYNTVAFTFADHTFNSIGVTHMIFSLVFAIGYCLVAEVFPKIKFWQGIGAGIIANICVHYITFPALGL
TPPVAEWPLYEHISELVGHIFWFWTIEVIRRDLRNRITKEPDAEEPLNQAHR

Specific function: Unknown

COG id: COG3477

COG function: function code S; Predicted periplasmic/secreted protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786481, Length=210, Percent_Identity=59.5238095238095, Blast_Score=265, Evalue=1e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009898 [H]

Pfam domain/function: PF07274 DUF1440 [H]

EC number: NA

Molecular weight: Translated: 23828; Mature: 23697

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIFEQTNPSRRRYGLAVFVGIIAGIISAFVKWGAEHPFPPRSPIDLFQSACPQPVLDAL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHH
NSGSLAMNSALEQCSRAVLNPPAVFLRDYIGIDPYNTVAFTFADHTFNSIGVTHMIFSLV
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHEEEEHHHHHHHHHHHHHHHHHH
FAIGYCLVAEVFPKIKFWQGIGAGIIANICVHYITFPALGLTPPVAEWPLYEHISELVGH
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
IFWFWTIEVIRRDLRNRITKEPDAEEPLNQAHR
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCC
>Mature Secondary Structure 
GIFEQTNPSRRRYGLAVFVGIIAGIISAFVKWGAEHPFPPRSPIDLFQSACPQPVLDAL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHH
NSGSLAMNSALEQCSRAVLNPPAVFLRDYIGIDPYNTVAFTFADHTFNSIGVTHMIFSLV
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHEEEEHHHHHHHHHHHHHHHHHH
FAIGYCLVAEVFPKIKFWQGIGAGIIANICVHYITFPALGLTPPVAEWPLYEHISELVGH
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
IFWFWTIEVIRRDLRNRITKEPDAEEPLNQAHR
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]