Definition Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome.
Accession NC_009053
Length 2,274,482

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The map label for this gene is 126209145

Identifier: 126209145

GI number: 126209145

Start: 1907178

End: 1908869

Strand: Reverse

Name: 126209145

Synonym: APL_1681

Alternate gene names: NA

Gene position: 1908869-1907178 (Counterclockwise)

Preceding gene: 126209146

Following gene: 126209144

Centisome position: 83.93

GC content: 27.96

Gene sequence:

>1692_bases
ATGAGTTTTATTCATATTCAACAAATATCAACAAAAATTAAAGAATTTTTTGAAGATAAAATAGATATAAAGGATATATC
ATCTAAAAAAGATGAAGATAGAGAAGATAATTTATTATCTAGATGTTTGGCAGCTTATGCTATTTACTATTTATCAGAAT
GTGGGCTAGATGAAGCTTCTAATTCAGTTACTGATGGTGAAAAAGATAATGGTATTGATGCCATATATTATTCAGAATAT
TCTAAAAAATTATTTATTGTTCAATCTAAATGGAGAAAAGATGGAACTGGTGAGCCAAATAAAGGGGATTTATTAAAAAT
AAATCAGGGTATAAAAGATCTATTTCAACTAAATTTGGATAGCTTTAATGAAAAAATTCAGAAGAAAGCTGATACTATTA
CTAAGGCTCTTACTACTTATGGTTCTAAAATTGAAATAATACTAATTGATACTTGTACTACTCCTGAATTAGTTGAAGAT
AACATCAGACCTATTATTCAAACTTTAAACGAAATAAATGAGAATGGAGATTCTAATGCCGAGCCAGTAGCTGTATTTAA
AAGGATGAATCAAAGTGATATTCACCGTTCATTAATCATGAAGGCTGGTAGGGACTCGATAAATTTAGAGCTGGGGTTAT
CTAATTGGGGAGATATTTCGGAACCATATAAAGCATTTTATGGATGTATCCCTGCAAGTGAAATAGCATCTTGGTGGGAG
GAATATGGGGATAAATTATTTGAAAATAATATCCGTAAAGTATTAGGAAGAACAGATGTCAATGAAGAAATGGAGAAACC
CTTACAGGATTCTCCAGAATTATTTTGGTATTTTAATAATGGAATTACAATTATTGCAGATAAAATTTCTAAAACAGCAG
TAGGAGGTGGTTCAAGAAGTATAGGGTCATTTAAATTAGAAAATGTATCTATTGTTAATGGAGCTCAAACTGTTAGTACT
ATAGGGAAATTTAAATCTAAACATGATGAAGATTCATTAAGTAATGTTCAAATTAATATCAGACTAATTGAAGTTACAAA
AAATTCTGAGCTAGAAAAATCAATTACAAAGGCGAATAATAGGCAAAACAGAATTGAGGGTATGGATTTTGCTTCACAAG
ATCTTGAGCAACAAAGAATAAAAAATGAATTGGTTTTAGAGAATGTTGAATATAGTATTATGCGTTCAGAATCATTTAAA
TCTAGCGAAAAATCATTTAATTTACAAGAAGCCACTATTGCCCTAGCCTCAGTAAATAGAAACATTACTCTTGCGGTTCA
AGTTAAAAATGCTATAGGTAAATTTTTTGAAGATTTAGATAAAGGAATATATAAAGAAATTTTTAATGCTGGTGTTAATG
GGTATCAAGTTTATAATTCAGTATTATTTACTAGGAAAGTTGATTCTATATTGATAGATAAAATAGATGAGTTACCTAAA
AAAGGAGGAAAGTTATATGGAATATATGTACATGGAAATAGAGTTGTAACACATTTAGTTGCAAAAAAAATAAATATATA
TACTGAATTACGAACTAAAAATCTAAACTTGAATATAGAAGATGAGGTTAATTTTATTATAGAAAAAATATCTAAGTTTA
TTGAGGAAAAATATCCTGATGCATTCTTAGCTTCTTTCTTTAAAAATATGACTAAATGTAAAGAGTTAGAAAACTACATT
TTTACTTCATAG

Upstream 100 bases:

>100_bases
TTGTTTAGGAATGCGAGGGTTACGTTAGGGTAGATTTGATTATAAATATTTAACCACACAATATACCTTATGTGATATTG
TTTTTCTTGAGGAAAAAATA

Downstream 100 bases:

>100_bases
ATTTAATACCTCCTGATAGTACTCGTCGAGTGCTATCGTAATATTGAAACAAGCGGTTAAATTTTCTTAAACATTTACAA
AATATTAGAGGAATTTGACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 563; Mature: 562

Protein sequence:

>563_residues
MSFIHIQQISTKIKEFFEDKIDIKDISSKKDEDREDNLLSRCLAAYAIYYLSECGLDEASNSVTDGEKDNGIDAIYYSEY
SKKLFIVQSKWRKDGTGEPNKGDLLKINQGIKDLFQLNLDSFNEKIQKKADTITKALTTYGSKIEIILIDTCTTPELVED
NIRPIIQTLNEINENGDSNAEPVAVFKRMNQSDIHRSLIMKAGRDSINLELGLSNWGDISEPYKAFYGCIPASEIASWWE
EYGDKLFENNIRKVLGRTDVNEEMEKPLQDSPELFWYFNNGITIIADKISKTAVGGGSRSIGSFKLENVSIVNGAQTVST
IGKFKSKHDEDSLSNVQINIRLIEVTKNSELEKSITKANNRQNRIEGMDFASQDLEQQRIKNELVLENVEYSIMRSESFK
SSEKSFNLQEATIALASVNRNITLAVQVKNAIGKFFEDLDKGIYKEIFNAGVNGYQVYNSVLFTRKVDSILIDKIDELPK
KGGKLYGIYVHGNRVVTHLVAKKINIYTELRTKNLNLNIEDEVNFIIEKISKFIEEKYPDAFLASFFKNMTKCKELENYI
FTS

Sequences:

>Translated_563_residues
MSFIHIQQISTKIKEFFEDKIDIKDISSKKDEDREDNLLSRCLAAYAIYYLSECGLDEASNSVTDGEKDNGIDAIYYSEY
SKKLFIVQSKWRKDGTGEPNKGDLLKINQGIKDLFQLNLDSFNEKIQKKADTITKALTTYGSKIEIILIDTCTTPELVED
NIRPIIQTLNEINENGDSNAEPVAVFKRMNQSDIHRSLIMKAGRDSINLELGLSNWGDISEPYKAFYGCIPASEIASWWE
EYGDKLFENNIRKVLGRTDVNEEMEKPLQDSPELFWYFNNGITIIADKISKTAVGGGSRSIGSFKLENVSIVNGAQTVST
IGKFKSKHDEDSLSNVQINIRLIEVTKNSELEKSITKANNRQNRIEGMDFASQDLEQQRIKNELVLENVEYSIMRSESFK
SSEKSFNLQEATIALASVNRNITLAVQVKNAIGKFFEDLDKGIYKEIFNAGVNGYQVYNSVLFTRKVDSILIDKIDELPK
KGGKLYGIYVHGNRVVTHLVAKKINIYTELRTKNLNLNIEDEVNFIIEKISKFIEEKYPDAFLASFFKNMTKCKELENYI
FTS
>Mature_562_residues
SFIHIQQISTKIKEFFEDKIDIKDISSKKDEDREDNLLSRCLAAYAIYYLSECGLDEASNSVTDGEKDNGIDAIYYSEYS
KKLFIVQSKWRKDGTGEPNKGDLLKINQGIKDLFQLNLDSFNEKIQKKADTITKALTTYGSKIEIILIDTCTTPELVEDN
IRPIIQTLNEINENGDSNAEPVAVFKRMNQSDIHRSLIMKAGRDSINLELGLSNWGDISEPYKAFYGCIPASEIASWWEE
YGDKLFENNIRKVLGRTDVNEEMEKPLQDSPELFWYFNNGITIIADKISKTAVGGGSRSIGSFKLENVSIVNGAQTVSTI
GKFKSKHDEDSLSNVQINIRLIEVTKNSELEKSITKANNRQNRIEGMDFASQDLEQQRIKNELVLENVEYSIMRSESFKS
SEKSFNLQEATIALASVNRNITLAVQVKNAIGKFFEDLDKGIYKEIFNAGVNGYQVYNSVLFTRKVDSILIDKIDELPKK
GGKLYGIYVHGNRVVTHLVAKKINIYTELRTKNLNLNIEDEVNFIIEKISKFIEEKYPDAFLASFFKNMTKCKELENYIF
TS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64068; Mature: 63937

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFIHIQQISTKIKEFFEDKIDIKDISSKKDEDREDNLLSRCLAAYAIYYLSECGLDEAS
CCEEEHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
NSVTDGEKDNGIDAIYYSEYSKKLFIVQSKWRKDGTGEPNKGDLLKINQGIKDLFQLNLD
CCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCCCEEEEHHHHHHHHHHCHH
SFNEKIQKKADTITKALTTYGSKIEIILIDTCTTPELVEDNIRPIIQTLNEINENGDSNA
HHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
EPVAVFKRMNQSDIHRSLIMKAGRDSINLELGLSNWGDISEPYKAFYGCIPASEIASWWE
CHHHHHHHCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHCCCCHHHHHHHHH
EYGDKLFENNIRKVLGRTDVNEEMEKPLQDSPELFWYFNNGITIIADKISKTAVGGGSRS
HHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCEEEEECCCEEEEEECHHHHHCCCCCCC
IGSFKLENVSIVNGAQTVSTIGKFKSKHDEDSLSNVQINIRLIEVTKNSELEKSITKANN
CCCEEECCEEEECCHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEECCCHHHHHHHHHCC
RQNRIEGMDFASQDLEQQRIKNELVLENVEYSIMRSESFKSSEKSFNLQEATIALASVNR
CHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHCCCHHHHHEEEEECCC
NITLAVQVKNAIGKFFEDLDKGIYKEIFNAGVNGYQVYNSVLFTRKVDSILIDKIDELPK
CEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KGGKLYGIYVHGNRVVTHLVAKKINIYTELRTKNLNLNIEDEVNFIIEKISKFIEEKYPD
CCCCEEEEEEECCHHHHHHHHHHHHHHEEEEECCCCEEEHHHHHHHHHHHHHHHHHHCCH
AFLASFFKNMTKCKELENYIFTS
HHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SFIHIQQISTKIKEFFEDKIDIKDISSKKDEDREDNLLSRCLAAYAIYYLSECGLDEAS
CEEEHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
NSVTDGEKDNGIDAIYYSEYSKKLFIVQSKWRKDGTGEPNKGDLLKINQGIKDLFQLNLD
CCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCCCEEEEHHHHHHHHHHCHH
SFNEKIQKKADTITKALTTYGSKIEIILIDTCTTPELVEDNIRPIIQTLNEINENGDSNA
HHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
EPVAVFKRMNQSDIHRSLIMKAGRDSINLELGLSNWGDISEPYKAFYGCIPASEIASWWE
CHHHHHHHCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHCCCCHHHHHHHHH
EYGDKLFENNIRKVLGRTDVNEEMEKPLQDSPELFWYFNNGITIIADKISKTAVGGGSRS
HHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCEEEEECCCEEEEEECHHHHHCCCCCCC
IGSFKLENVSIVNGAQTVSTIGKFKSKHDEDSLSNVQINIRLIEVTKNSELEKSITKANN
CCCEEECCEEEECCHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEECCCHHHHHHHHHCC
RQNRIEGMDFASQDLEQQRIKNELVLENVEYSIMRSESFKSSEKSFNLQEATIALASVNR
CHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHCCCHHHHHEEEEECCC
NITLAVQVKNAIGKFFEDLDKGIYKEIFNAGVNGYQVYNSVLFTRKVDSILIDKIDELPK
CEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KGGKLYGIYVHGNRVVTHLVAKKINIYTELRTKNLNLNIEDEVNFIIEKISKFIEEKYPD
CCCCEEEEEEECCHHHHHHHHHHHHHHEEEEECCCCEEEHHHHHHHHHHHHHHHHHHCCH
AFLASFFKNMTKCKELENYIFTS
HHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA