Click here to switch to the map view.

The map label for this gene is slyX

Identifier: 126209103

GI number: 126209103

Start: 1864527

End: 1864748

Strand: Reverse

Name: slyX

Synonym: APL_1639

Alternate gene names: 126209103

Gene position: 1864748-1864527 (Counterclockwise)

Preceding gene: 126209109

Following gene: 126209102

Centisome position: 81.99

GC content: 37.84

Gene sequence:

>222_bases
ATGACTACAGAGAATGACCTATTAAATCGCATTGCGGAATTGGAAACCAAAGTCGCTTTTCAAGAAATTACGCTCGAAGA
ATTAAACCAAGCGTTAATTCATCATCAGCTTGCACTAGATAAGTTACAAACTCAAATGCGTCATTTTGCAGAAAAATTAA
AAGGCGCACAAGTCAGTAATATTGCTTCGCAAGCGGAAGAAACACCTCCACCTCATTATTAG

Upstream 100 bases:

>100_bases
TTTTTAACATAGATTTTCCTTATATAAATAAAATAATTTGTTAAAAGAATGGTGGATAGGGTAAAGTGTATTTCTATTTT
ATACAACCTTTTTATTTCAA

Downstream 100 bases:

>100_bases
GCTATGAACTTATAGTTTAGTTCGTATTCTAATCACTCATAGTTTTTGTTTAAGGTGATCGACAAGATGTTATGTGAGAA
ATTGATAAAATGGGTGACAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 73; Mature: 72

Protein sequence:

>73_residues
MTTENDLLNRIAELETKVAFQEITLEELNQALIHHQLALDKLQTQMRHFAEKLKGAQVSNIASQAEETPPPHY

Sequences:

>Translated_73_residues
MTTENDLLNRIAELETKVAFQEITLEELNQALIHHQLALDKLQTQMRHFAEKLKGAQVSNIASQAEETPPPHY
>Mature_72_residues
TTENDLLNRIAELETKVAFQEITLEELNQALIHHQLALDKLQTQMRHFAEKLKGAQVSNIASQAEETPPPHY

Specific function: Unknown

COG id: COG2900

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the slyX family

Homologues:

Organism=Escherichia coli, GI1789747, Length=64, Percent_Identity=60.9375, Blast_Score=84, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SLYX_ACTP2 (A3N2T7)

Other databases:

- EMBL:   CP000569
- RefSeq:   YP_001054328.1
- STRING:   A3N2T7
- GeneID:   4849715
- GenomeReviews:   CP000569_GR
- KEGG:   apl:APL_1639
- eggNOG:   COG2900
- HOGENOM:   HBG700945
- OMA:   IAELEMK
- ProtClustDB:   PRK02119
- BioCyc:   APLE416269:APL_1639-MONOMER
- HAMAP:   MF_00715
- InterPro:   IPR007236

Pfam domain/function: PF04102 SlyX

EC number: NA

Molecular weight: Translated: 8338; Mature: 8206

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTENDLLNRIAELETKVAFQEITLEELNQALIHHQLALDKLQTQMRHFAEKLKGAQVSN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
IASQAEETPPPHY
HHHHHHCCCCCCC
>Mature Secondary Structure 
TTENDLLNRIAELETKVAFQEITLEELNQALIHHQLALDKLQTQMRHFAEKLKGAQVSN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
IASQAEETPPPHY
HHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA