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The map label for this gene is ureB

Identifier: 126209081

GI number: 126209081

Start: 1842892

End: 1843197

Strand: Reverse

Name: ureB

Synonym: APL_1617

Alternate gene names: 126209081

Gene position: 1843197-1842892 (Counterclockwise)

Preceding gene: 126209082

Following gene: 126209080

Centisome position: 81.04

GC content: 46.41

Gene sequence:

>306_bases
ATGATCCCCGGAGAATACCAATTAGCGGACGGTGATATACAAGCGAATGTGGGTCGCAAAACCGTCAAATTAGAAGTAGT
CAATACAGGTGACCGCCCGATTCAAGTCGGTTCGCATTACCATTTTTTTGAAACCAATCACGCCCTAAAATTCGACCGCT
TGCAGGCTCGCGGTATGCGTTTAAATGTGCCGTCCGGCAATGCGGTGCGTTTTGAACCCGGCGAAGCGAAAGAAGTGGAA
CTGGTTGAGTTTGGTGGTAATAAAGTGATTTACGGTTTCCATAATGAAATCGACGGCAAATTATAG

Upstream 100 bases:

>100_bases
AATATTTTGCAAATTCCCCTCTCTCTGCAAAAAATTGTCTGACGCAATTTTCTGCTGCCTCTCTCTCAAGGGGAGAAAGT
AAACAAATAAGGAATAAAAA

Downstream 100 bases:

>100_bases
GGGGCAGAAAATGGCATTAACAATCCCACGCAGCCAGTATGTAGCGACTTACGGCCCGACAGTCGGTGATAAAGTCCGTT
TAGGCGACACCGATTTATGG

Product: urease subunit beta

Products: NA

Alternate protein names: Urea amidohydrolase subunit beta

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MIPGEYQLADGDIQANVGRKTVKLEVVNTGDRPIQVGSHYHFFETNHALKFDRLQARGMRLNVPSGNAVRFEPGEAKEVE
LVEFGGNKVIYGFHNEIDGKL

Sequences:

>Translated_101_residues
MIPGEYQLADGDIQANVGRKTVKLEVVNTGDRPIQVGSHYHFFETNHALKFDRLQARGMRLNVPSGNAVRFEPGEAKEVE
LVEFGGNKVIYGFHNEIDGKL
>Mature_101_residues
MIPGEYQLADGDIQANVGRKTVKLEVVNTGDRPIQVGSHYHFFETNHALKFDRLQARGMRLNVPSGNAVRFEPGEAKEVE
LVEFGGNKVIYGFHNEIDGKL

Specific function: Unknown

COG id: COG0832

COG function: function code E; Urea amidohydrolase (urease) beta subunit

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the urease beta subunit family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): URE2_ACTP2 (A3N2R5)

Other databases:

- EMBL:   CP000569
- RefSeq:   YP_001054306.1
- ProteinModelPortal:   A3N2R5
- SMR:   A3N2R5
- STRING:   A3N2R5
- GeneID:   4848933
- GenomeReviews:   CP000569_GR
- KEGG:   apl:APL_1617
- eggNOG:   COG0832
- HOGENOM:   HBG365918
- OMA:   RIVYGFN
- ProtClustDB:   PRK13203
- BioCyc:   APLE416269:APL_1617-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01954
- InterPro:   IPR002019
- Gene3D:   G3DSA:2.10.150.10
- TIGRFAMs:   TIGR00192

Pfam domain/function: PF00699 Urease_beta; SSF51278 Urease_beta

EC number: =3.5.1.5

Molecular weight: Translated: 11283; Mature: 11283

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPGEYQLADGDIQANVGRKTVKLEVVNTGDRPIQVGSHYHFFETNHALKFDRLQARGMR
CCCCCEEEECCCEEECCCCEEEEEEEEECCCCEEEECCEEEEEECCCCEEEECCCCCCEE
LNVPSGNAVRFEPGEAKEVELVEFGGNKVIYGFHNEIDGKL
EECCCCCEEEECCCCCCEEEEEEECCCEEEEEECCCCCCCC
>Mature Secondary Structure
MIPGEYQLADGDIQANVGRKTVKLEVVNTGDRPIQVGSHYHFFETNHALKFDRLQARGMR
CCCCCEEEECCCEEECCCCEEEEEEEEECCCCEEEECCEEEEEECCCCEEEECCCCCCEE
LNVPSGNAVRFEPGEAKEVELVEFGGNKVIYGFHNEIDGKL
EECCCCCEEEECCCCCCEEEEEEECCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA